ChIP-Atlas: Target genes

Potential target genes for Rara

Query protein: Rara
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX520468 | F9
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
Rara's Target genes

◢ Rara: Average

◢ SRX018669: ES cells

◢ SRX10562781: ES cells

◢ SRX208055: ES cells

◢ SRX208062: ES cells

◢ SRX520462: F9

◣ SRX520468: F9

◢ SRX520474: F9

◢ SRX520479: F9

◢ SRX3301664: Forelimb

◢ SRX3301665: Forelimb

◢ SRX4369776: Germline stem cells

◢ SRX4369779: Germline stem cells

◢ SRX4369782: Germline stem cells

◢ SRX4369785: Germline stem cells

◢ SRX337439: Liver

◢ SRX018670: mESC derived neural cells

◢ SRX118692: mESC derived neural cells

◢ SRX118693: mESC derived neural cells

◢ SRX675957: Th1 Cells

◢ Rara: STRING

Slc15a1
Pibf1
Dis3
Efnb3
Bcl2a1a
Tmem231
Gabarapl2
Bcl2a1b
Ccdc171
Adgra2
Tet2
Cdv3
Aqp3
Bcl2a1d
Mtf2
Bbs1
Zfhx2
Thtpa
Hivep3
Cdk15
Mcl1
Rhobtb1
A930033H14Rik
Mkrn1
Tmem181a
Ube2s
Agpat5
Adcy5
Kcnk5
Xbp1
Tnfsfm13
Tnfsf12
Uri1
Mdga1
C1qbp
Prdx6
Notch4
Ints3
Fubp3
Unc93a2
Tal2
Oxnad1
Dph3
Capns1
Tmem191c
Pmepa1
Dctn6
Rarb
Cidea
Golga7
Pdgfrb
Cdx1
Ucp2
Enpp4
Cmip
Sntb2
Tomm5
Hoxb13
Rcor2
Rpgrip1
Nanog
Cyp26a1
Cyp26c1
Abl1
Nodal
Dennd2c
Plekha7
Dusp9
Septin1
Tbc1d10b
Mylpf
Stra6
Slc43a1
Dppa2
Rad23a
Calr
Camk2n1
Fitm2
1700037H04Rik
Kat7
Zfp827
Phf5a
Aco2
Elavl3
Znfx1
Klf2
G0s2
Rfc5
Hoxb4
Hoxb5
Bmerb1
Ifitm7
Ttk
Tm2d2
Adam9
Myrf
Pigz
Cyp11a1
Nectin2
Tefm
Naglu
Foxo3
Ect2
Gpx4
Jam2
Dpp4
Unc93a
Pltp
Smyd2
Msgn1
Cic
Ncor1
Pomgnt2
Grasp
Angptl8
Dock6
Dcaf4
Acsl4
Wdtc1
Kng2
Itpk1
Gm525
Dgke
Cphx3
Cphx2
Cphx1
Kcnj9
Snai1
Tmem170
Greb1
Rnf13
Mafa
Oaz2
Rarg
Phc1
Xpo1
Gja1
Cldn19
Jund
Iqcn
Tnfrsf19
Rai1
Plbd2
Tmem235
Tha1
Tcp11
Cfap74
Foxp1
Mzt1
Kank3
Exosc5
Bckdha
Pml
Socs3
Porcn
Ggact
Plekhb1
Cenpm
Gm36210
Map7
Il17rc
Nfyb
Trmt1
Nacc1
Fstl3
Coa7
Letmd1
Tm7sf3
Med21
Zfp553
Galnt2
Zfp532
Mtnr1a
Lasp1
B3gnt7
Extl1
Pold2
Phf11d
Rbks
Babam2
Wsb2
Fbxo44
Fbxo2
Fbxo6
Fndc3b
Cotl1
Thap4
Abcc4
Arhgap27
Sgf29
Ptk7
Nsd1
Rxfp4
Mrc2
Baz1b
Ppp3cc
Uck1
Kdm3b
S100g
Msh6
Evi5
Fbxw4
Hps5
Gtf2h1
Zc3h12a
Ube2o
Nudt4
2510009E07Rik
Muc1
Itga5
Ttpal
Zdhhc18
Bcar1
Tfrc
Mib2
1700067K01Rik
Misp3
Ncmap
Nudt1
Mrm2
Twsg1
Kcnk4
Gpr137
Bad
Catsperz
Olfml2b
Gipc1
Ptger1
Lag3
Mreg
Brwd1
Fads1
Cacng6
Bcat2
Hsd17b14
Eif4e
Znrf1
Wdr59
Mis18bp1
H2al2a
Sepsecs
Prr5
Wasf2
Dok4
Dpep1
Slc6a16
Cd37
Taok3
Suds3
Bhlha15
Hrob
Kdm3a
Stat5b
Ksr1
Mok
Arhgap19
Coro1b
Gpr152
Cabp4
Prtg
Abr
Mgat3
Lpar5
Mmp11
Gm867
Chchd10
Rab11fip2
Rwdd2b
Ltn1
Srp14
Pick1
Ltbp3
Tmem135
Tspan17
Prdm14
Vash1
Odf3l1
Cspg4
Eif4a2
Serpinf2
Psmc4
S1pr2
Mmp9
Ubxn2a
Atad2b
Dpf3
Fam81a
Klhdc8a
Ptprcap
Ghdc
Hcrt
Zc3h3
Atg14
Smdt1
Ndufa6
Mllt1
Zfp980
Zfp740
Csad
Ptprf
Cxcr3
Sertad2
Psmb7
Lgals9
Xylb
Ccdc92b
Nr6a1
Olfml2a
Fgr
Sec22c
Ss18l2
Ankle2
Fam71e1
Emc10
Ccdc113
Dnase2b
Taf13
Pspn
Clpp
Alkbh7
Vars
D17H6S56E-5
Dppa5a
Cnn3
Ninj2
Bmp4
Lefty1
Gtpbp4
Adgre5
Itga3
Dhx32
Pcsk1n
Eras
Slc29a1
Mymx
Thrsp
Spry2
Txlng
Zscan4f
Gtf2h4
Vars2
Men1
Map4k2
Mroh6
Fgf1
Tbc1d24
Crybg2
Asap3
Pgbd5
Acp6
Mtg2
Fam25c
Ptpdc1
Ticrr
Fanci
Prmt8
Smpd4
Dnajb6
Spata33
Chmp1a
Msi1
Dennd6a
Llgl2
Crlf2
Ccdc102a
Adgrg5
Klhl34
Drd4
Sct
Cmtm7
Aspscr1
Notum
Slc4a9
Cul5
Katnal2
Ankrd44
Spred2
Ankhd1
Hspb8
Acot7
Arf4
Max
Nol6
Ctdsp2
Gstp2
Gstp1
Zfp988
Zscan4c
Nphs1
Kirrel2
Clcn2
Rfx2
Tctex1d4
Plk3
Btbd19
Tnnt1
Tnni3
Rab8a
Ints11
Cptp
Rxrg
Grm2
Septin11
Zfp979
Rbm8a
Rnf125
Wfdc3
Dnttip1
Tmed10
Abcb7
R3hdm2
Atg9b
Abcb8
Ppp1r9a
N4bp1
Kazn
Ccdc120
Ndufs7
Hoxa1
Atp6v0d1
Agrp
Sap30
Gamt
Dazap1
Camk1
Sub1
Twistnb
Chrna5
Kxd1
Fkbp8
Sdha
Ccdc127
Ankrd45
Tex50
Bmt2
Dedd
Mbd6
Ddit3
Smim8
Jarid2
Ammecr1l
Lama3
Slc25a39
Slc17a7
Pth2
Gfy
Tbl1xr1
Ago2
Boc
Ptpmt1
Zfp534
Ccsap
Erv3
Icam1
Lamc3
Trim7
Itpka
Btbd16
Hjurp
A730008H23Rik
Pbld2
Hnrnph3
Zfp219
Tmem253
Ttll3
Ptprz1
Med13l
Zyg11a
Nupl2
Fam168a
Gprc5c
Ttll10
4921517D22Rik
Tmem116
Erp29
Dag1
Pgd
Rpp25
Erc2
Id3
Cdh1
Tnrc18
Serpinh1
Ttll6
Cog6
Rps10
Nudt3
Mmp14
Dhx35
Tmem125
Cpt1a
Bcl11b
Zfp985
Dnaaf3
Irf2bpl
Rab39
Cox7a2l
Caln1
Slc39a2
Mettl17
A930007A09Rik
Rbm14
Gm21992
Mllt6
Daxx
Smim40
Slc35f2
U2surp
Vps37d
Dnajc30
Bud23
Pif1
Fam170b
Otop2
Ush1g
Otop3
Rap1gap2
H2-Bl
Psma6
Atg2a
Ppp2r5b
Olfr806
Doc2b
Def6
Traf3ip2
Hspbp1
Brsk1
Gm18905
Arhgef26
Nek2
Lipe
Zfp987
Tlcd1
Rpl23a
Nek8
Mpc1
Traf4
Plekhf2
Hagh
Fahd1
H4c11
H2bc14
Marcks
Sall2
Pyroxd1
Poc1b
Galnt4
Irf5
Gca
H2-M5
Zfp57
Frmd4a
Zfp930
Agtpbp1
Olfr157
Rplp2
Slc25a22
Pidd1
Slc9a5
Fhod1
Ppp2r5e
Ggnbp1
Bak1
Icosl
Ric8b
Ddc
D230025D16Rik
Dnmt3a
Nkx6-3
Cox7a1
Cdh3
Slc12a7
Fez2
Lsm1
Bag4
Ubxn8
Gipc2
Gsr
Gabbr1
Zfp280b
Txndc11
Zfp600
Kcnh2
Yars
S100pbp
Uqcr11
Mbd3
Fbln1
Ttc39b
Scube2
Psmd7
Sirt3
Psmd13
Cspg5
Tpst1
Tbc1d2
Slc2a9
Fn1
Mdk
Slc25a40
Dbf4
Strada
Smim38
Rsc1a1
Sptan1
Tgm1
Il3ra
Srrm3
Taf6l
Mical1
Abcc5
Ttc25
Rap1gap
Mdm4
Tspan9
Ank1
Zfyve28
Cfap99
Agmat
Olfr855
Olfr854
Wdr6
Cst3
Slc35g1
Ifngr1
Islr2
Mrpl37
Cyb5rl
Ass1
Col4a2
Npvf
Crmp1
Zmiz1
Apobec2
Foxn4
Arhgef10
H2bl1
Prss38
Eif4ebp1
Spag9
Ubr7
Gon7
Gm20604
Tapt1
Bcl2l11
Plcd1
Slc12a4
Dpep3
Ppdpf
Commd2
Zbtb34
Megf11
Ms4a14
Gpm6b
Blmh
Ccar1
Vsx2
Ttyh3
Itch
Gatad2a
Wwox
Cfl2
Eif2b3
Rnf169
Rusc2
Tmem205
Rab3d
Ccdc159
Ldb1
Pprc1
Slc27a3
Ccr4
Yipf5
Vmn2r85
Sertad1
Prx
Dok2
Satb1
Kifc3
Cfap20dc
Ier2
Rnf19b
Cdk1
Rcbtb1
Slc16a2
Mmgt2
Lrrc75a
Sugt1
Ankrd28
Srrm1
Tbc1d22a
Lrrc4b
Srgn
Eif4h
Rab5c
Rps6ka1
Atp2a2
Smndc1
Kdelr3
Gnai2
Akirin2
Crtap
Tmppe
Glb1
Maats1
Cox17
Babam1
Ushbp1
Nr2f6
Zfp839
Cdc42bpb
Rex2
Armc12
Aven
Cpsf4l
Hoxa5
Midn
Atp5d
Hoxa4
Cbarp
Dpp9
Rusc1
Slx1b
Bola2
Dop1b
Coro1a
Setd4
Cbr1
Rreb1
Tead4
S100a16
Lctl
C130073F10Rik
Sipa1
Rpl11
Slc22a21
Slc26a2
Pde6a
Mfsd14a
Fbxo8
Cep44
Rfwd3
Itgb7
Rpe
Acot11
Sgk1
Sigirr
Agtrap
Coq8b
Gfod1
Anxa11
Gpr179
Tet1
Lpcat1
C77080
Rnd3
Rai14
Slc7a7
2410137M14Rik
Slc4a7
Tmem39a
Znrd1as
Poglut1
Oas2
Plcb4
Scyl1
Flrt1
Zfp33b
Wdr25
Wars
Gm7429
Trim17
H3f4
Mybl2
Kpna1
Dhcr24
B230307C23Rik
Marchf3
Fam32a
Cib3
Acmsd
Ptgir
Ttll13
Zic5
Zic2
Taar1
Steap3
Ttc39c
Dusp5
1810010H24Rik
Zfr
Pecam1
Gpr180
Tgds
Nhlh2
Ttc7b
Dcaf12
Ubc
Grtp1
Slc25a38
Stra8
Tmco2
Fxr1
Wdr91
Plch1
Mef2b
Lyrm1
Dcun1d3
Rbbp5
Pycr2
Lefty2
Vsig10
Rgs11
Pdia2
Arhgdig
Acacb
Chd9
Tnk2
Spdef
Gnb5
Smc3
Rfc2
Efhb
Ercc4
Asah1
Slc39a14
C2cd5
St6galnac6
Fgd1
Dab2ip
Cldn34d
Nemf
Megf8
Tmem145
Arf6
Tmem184b
Smagp
Sox21
Rpl17
BC031181
Isg15
Agrn
Dym
Prr14
Mettl26
Wfikkn1
Tfcp2l1
Rest
Vmn1r225
Dctn2
BC028528
Ciart
Aph1a
Gpatch3
Trim63
Cndp2
Cobl
Ppp1r14b
LOC114841036
Fkbp2
Pbx2
Gpsm3
Ager
Plcb3
Masp2
Srm
Ehd2
Ablim2
Myo10
Aurkc
Epop
Eif2ak2
Ppp2r2d
Myl9
Col6a6
Mettl16
Twf2
Pdk1
8030462N17Rik
Pot1a
Racgap1
Best3
Fam178b
Cox5b
Angel2
Rps6kc1
Bcl2a1c
4921528I07Rik
Hectd1
Rnf165
Resf1
Rcc1
Gadd45b
Hbegf
Abcf3
Zfpm1
Abhd6
Gtf3a
Sp8
Epp13
Faiml
Cep70
Slc25a51
Edem2
Oscar
Ndufa3
Rita1
Ddx54
Il17c
Ppcdc
Lims1
Guf1
Abhd11
Ooep
Gm9595
Smtnl2
G3bp1
Atox1
Etnk2
Yap1
Mapkapk5
Fam205a1
Plpp2
Olfr915
Slc25a36
Cdc42ep3
Nr0b1
Zfp870
Mta3
Ubap1
St3gal3
Enc1
Ap1s1
E030030I06Rik
Zcchc10
Zfp809
Ide
Mrpl40
Hira
Aldoart2
Capn3
Rmnd5b
Gm20346
Anp32a
Agpat2
Spata25
Neurl2
Ctsa
Zswim1
Vmn1r1
Mmp20
Ncapd2
Mrpl51
Stard6
4930503L19Rik
Sgms2
H2ap
H2al3
Rara
Cacnb3
Otud5
Phactr3
Tigar
Tdh
Ccdc160
Pcmtd1
Fam120a
Zbtb43
Nfic
Tyrobp
Rnf5
Agpat1
Kank2
Smyd4
Rpa1
Stk33
Melk
Pik3ip1
Vav3
Spty2d1
H2-Q8
H2-Q6
Lman1
Kat6b
Afg3l1
Arhgap35
Chordc1
Smim7
Ercc6
BC048679
Ap3b2
Tle6
Parvb
Nid1
Aadacl2fm1
Hspa8
Fam160b1
Slc7a15
Gsx2
Grm4