ChIP-Atlas: Target genes

Potential target genes for Rara

Query protein: Rara
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX520462 | F9
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
Rara's Target genes

◢ Rara: Average

◢ SRX018669: ES cells

◢ SRX10562781: ES cells

◢ SRX208055: ES cells

◢ SRX208062: ES cells

◣ SRX520462: F9

◢ SRX520468: F9

◢ SRX520474: F9

◢ SRX520479: F9

◢ SRX3301664: Forelimb

◢ SRX3301665: Forelimb

◢ SRX4369776: Germline stem cells

◢ SRX4369779: Germline stem cells

◢ SRX4369782: Germline stem cells

◢ SRX4369785: Germline stem cells

◢ SRX337439: Liver

◢ SRX018670: mESC derived neural cells

◢ SRX118692: mESC derived neural cells

◢ SRX118693: mESC derived neural cells

◢ SRX675957: Th1 Cells

◢ Rara: STRING

Greb1
Olfr806
Wwox
Bmpr1b
Aadacl2fm1
Abhd6
Fbxw7
Setd4
Cbr1
Acacb
Trim29
Akirin2
Marchf3
Tmem33
P4ha3
Slc7a15
Tecpr1
Olfr855
Olfr854
Cyth4
Vgll2
Tll1
Clec2g
Nkx2-6
Olfr180
Maneal
Ovol2
Kpna1
Tent5c
Usp25
Fhl1
Csf2ra
Rasip1
Izumo1
Fut1
Fgf21
Fam227b
Dtwd1
Slc14a2
Ceacam12
Kcnj16
Dlg4
Acadvl
Fam24b
Fam24a
Cuzd1
Ppp3r1
Trib3
Nemf
Habp2
Gnb5
Krt15
Krt13
Sympk
Adam5
Cxcl1
Mill1
Malt1
Cpa1
Ilf2
Cox8c
Cd44
4921539E11Rik
Fgl2
Pom121l2
Prl3c1
Gm3415
Gm3402
4930449I24Rik
Mettl14
Mycn
Abcc12
Pcdh20
Tmem211
Gzmk
Olfm1
Rph3al
Zfp949
Rgs18
Gtf2a1l
Prkdc
Mcm4
C1ra
Rps29
Lrr1
Gja4
Map10
Omp
Ranbp3l
Mettl7a2
Methig1
Higd1c
Olfr646
Ap3s2
Tro
4921509C19Rik
AU018091
Nlrp4c
Tmem131l
Gramd1b
Hmox2
Adam32
Eif2s3y
Creb3l3
Prxl2b
Slc13a2
Wif1
Tpm2
Yars2
Tmigd1
Mrps2
1700007K13Rik
Gucy1a2
Stpg4
H3c8
H4c8
H2ac10
Adck5
Map4k4
Slc38a5
Ms4a4b
Defb48
Defb47
Npffr2
Ccn4
Ttf1
Cfap77
Appl2
Mro
Akap8l
Sumf1
B4galnt3
Nfrkb
Cdh20
Asgr1
Chn2
Gcgr
Cbx4
Tube1
Fam229b
Sp7
Onecut3
Klf4
Lrrc10b
Ubash3a
Zdhhc12
Pkn3
Il17b
Tas2r134
Dcpp1
Gm648
Gm14151
Cyfip2
Htr7
Lgi4
Fxyd7
Fxyd1
Fam89a
Klk9
Klk8
Klk7
Xpnpep1
Ccin
Klra10
Il12rb2
Katna1
H2bc6
Etv3l
Stk3
Gria3
Fgd4
Trim40
Trim31
Gas1
Tacr2
Mypn
Trpm1
Fads3
Tmem178
Ing3
Pan3
Olfr1128
Asph
Ctag2l2
Caskin1
Lipf
Dnajc27
Trim58
Amn
Gpm6a
Il19
Btnl6
Defb8
Tnfsf15
Tgm4
Tmem42
Il1b
Il4
H3c10
H2bc13
H2ac13
Olfr1359
Atp1a4
Ddx42
Sema4a
Sbk2
Cyp27a1
Vstm4
Prr16
Spata16
Xrcc1
Pinlyp
Ei24
Ms4a1
Olfr1461
Olfr1459
Itih2
Tcim
Erp27
C1rb
Carnmt1
Cdk5rap2
Limch1
Cenpf
Musk
Oxct1
Extl1
Dpysl3
Slc44a3
Olfr1066
Rab7
Olfr1396
Fmn1
Cmah
Gm34531
Gabrb3
A330070K13Rik
Dpysl2
Pnma2
Spg20
Magel2
Iqcm
Ripor3
Pdcd1
Nrg3
Rrn3
Esr1
Dmrtc1c2
Dmrtc1c1
Sec14l1
Vmn2r55
Slc26a4
Cacna1c
Nrk
Mrtfa
Ehd4
Gc
Ablim1
Sema4f
M1ap
Ccr8
Hpd
Ndst3
Gm3376
Naaa
Aqp7
Ptpre
Foxp2
Slco2b1
Vmn2r91
Olfr1274
Atp5g1
Pomgnt2
Amy2a5
Amy2a4
Amy2a3
Amy2a2
Nox3
Capg
Ostn
Adamts16
Nr2e3
Calm4
Il24
Tbc1d30
Mylip
Pgbd1
Adcyap1
Izumo3
Retnla
Snx6
Ppbp
Cxcl5
Knstrn
Wrap73
Trp73
2410137M14Rik
H2-M5
Hk1
Avpr1a
Lilr4b
Dyrk2
Igdcc4
Slc33a1
Gmps
Cacnb2
Sowahb
Gm1979
Frmpd4
Haus4
Ibsp
Arhgap45
Hoxb4
Nipal1
Cnga1
Atxn7l3b
Steap4
Hoxb3
Fer
Akap14
Iqschfp
Iqcj
Olfr1510
Miip
Fv1
Slfn4
Olfr1183
Olfr1182
Obi1
Slc22a23
Alg14
Klk1b3
Klk1b24
Trim34a
Prkd2
Prss52
Prss51
Prss55
Ifi47
Npbwr1
Elp3
Zfp101
1700012B07Rik
Otor
Il31ra
Laptm4a
Ier5
Iqcf6
Thbs4
Skor2
Topors
Smim27
Cyp4f18
9430069I07Rik
Sema4b
Pnliprp1
Gm36210
Olfr877
Ifna6
Ifna5
Ifna7
Ifna11
Grap
Olfr804
Olfr803
Otub2
2310050C09Rik
Wdr35
Rock1
Gpr141
Alox12b
Fosb
Atp10a
Nags
Havcr2
Ubr4
Inmt
Ppp6c
Serpini1
Hal
Ptbp2
Sgcz
Olfr1062
Olfr1061
Vmn1r224
Tslp
Gm42517
Slc2a9
Zc3hav1
Ccn3
Wipf2
Has1
Pibf1
Dis3
Rpl36al
Mgat2
Lum
Sumo1
Nop58
Pex26
Lrmp
Gpr33
Slc5a9
4930550C14Rik
Lgi1
Psg19
Phlda2
Card19
Igfbp2
Dlg1
1700018B08Rik
Pdcd1lg2
Hexb
Grm5
Sbno2
Stk11
Mnat1
Depdc1a
Six4
Trim7
Trim41
Trim2
Slain1
Gatad2b
Ddr2
Fbxw4
Pard3
Kcnn2
Siah2
Tg
Lrrc20
Pla2g4d
Snorc
Gpr6
Gm3646
Abr
Pcx
Edf1
Traf2
Lrrc23
Eno2
Sval3
Anxa6
Atp4a
Tmbim1
Fcrl6
Col24a1
Alx4
Lyst
Foxd1
Fam71f1
Adamts19
Vmn2r102
Rps11
Fam83a
Tdrd7
Gm18905
Pid1
Stk35
4932438A13Rik
Lrrtm4
Asb2
Enpep
Skint6
Tor1b
Muc5ac
Rgs8
Vsx2
H60c
Olfr449
Bcl6
Aoah
Rbfox1
Olfr652
Olfr813
Tiam2
Tafa5
Ncald
Fam163a
Irf2
Iqcf1
Copz1
Pigs
Srcin1
Rps6ka6
Unc119
Mrln
Shank1
Clec11a
Gm12887
F11
Mink1
Cstdc4
Megf6
Cxxc4
Pcolce2
Slc7a11
Ell3
Ly75
Serpinf1
Oxr1
Sycp2l
Gcm2
Tmprss11e
Best2
Olfr677
Ncam1
Vcan
Rassf9
Stox2
Olfr1129
Bmp7
Apon
Nek3
Prpf38b
Nfe2
D030056L22Rik
Tpcn2
Il11ra2
Gm2002
Gm13305
Bpifb5
Inka2
Chchd3
Npy5r
Eepd1
Nxpe2
Rab22a
Slc28a2
Zfp647
Cyp3a16
Prep
Chic1
Nps
Agbl5
Kcnk9
Shox2
Rsrc1
Olfr122
Dsg1a
Fanci
Crebl2
Rlbp1
E030030I06Rik
Foxd4
Krt1
Mrpl21
Ighmbp2
Zfp410
Btrc
Vgll4
Ybey
Mcm3ap
Hoxb1
Olfr222
Zp1
Lvrn
Cngb3
Scgb2b1
Vmn2r94
Elac2
Herc6
Rbmy
Gm21708
Gm21704
Gm21693
Gm21677
Slc2a10
Pate4
Gm4064
Gm10352
Gm10256
Olfr125
Cachd1
G6pc
Snrnp35
Rilpl2
Ap1g2
Jph4
Zbtb2
Slc25a13
Rab7b
Ly6l
Pnrc2
Asap1
Rasgrf1
Poldip3
Galnt2
Kctd2
Atp5h
Mrpl58
Selenbp1
Brinp1
Faim
Pitrm1
Pdgfra
Pimreg
Aipl1
Olfr1
Cela1
Myh2
Rpl37rt
Olfr1402
Asrgl1
Usp37
Il22ra2
Ackr4
Plcd4
Lrig3
Marco
Vit
Gm5936
Cfap126
Slc16a7
Rnase10
Klk1b9
Klk1b1
Nkx3-1
Tox3
E330021D16Rik
Ugt1a8
Zp3r
Pgls
Niban3
Nkx2-5
Gnl2
Arhgap39
Dcx
Vps35l
Cacna2d4
Eml4
Pon3
Hnrnpul1
Eomes
Ciita
Hbb-bt
Hbb-b2
Olfr367-ps
Olfr685
Olfr1375
Olfr846
Mta3
Dolk
Adrb1
Pak3
Svs5
Synpr
Gm826
Soga3
Gsdmc2
Camk2n1
Acy3
Slc16a10
Cyren
Zscan2
Abhd17c
Intu
Kng1
Cyp2d9
Efnb1
Runx1
Apcdd1
Atp6ap2
Tc2n
Gzmg
Igip
Gm765
Klra8
Klra21
Olfr1008
Olfr12
Ltbp1
Aldh3b2
Olfr1282
Olfr1281
Olfr809
Olfr808
Cdh26
Maml2
Ccdc81
Olfr1487
Olfr1098
Dynlt3
Mal2
Gm35586
Cnrip1
Sult2a8
Olfr1006
Olfr291
Olfr1391
Ss18
Ahi1
Ccdc60
Olfr1311
Pus1
Ep400
Zfp944
Zfp758
Fgfbp3
Limd1
Scgb2b3
Cyp2f2
Gfi1b
Olfr1181
Mctp1
Rsph3b
Scn8a
Iigp1
Camk2g
Tgtp2
Tgtp1
Rpl39l
Slc17a8
Sema7a
Marcksl1
Zfp710
Dcun1d4
Kcna6
Ncoa2
Adcy10
Msx3
Nrg2
Med16
Prss47
Clk3
Cfd
Apoa4
Dbn1
Rfx4
Lzts1
Mup17
Capn3
Echdc2
Rtn4r
Arg1
Apol8
Trpm3
Ubc
Rab11fip2
Shmt2
Prap1
Fuom
Klhl40
Hoxc11
Nxph4
Ifna13
Pramel32
Mpig6b
Ly6g6f
Ly6g6c
Gstm7
Ly6g6e
Ly6g6d
Nemp1
Nab2
Lgals6
Lgals4
Slc15a1
Syt4
Ces2a
Fuca2
Ctnna3
Dclk3
Wwc1
Tdpoz3
Plek2
Car2
Mcoln3
Rbmxl2
Timm8a2
Psg22
Tlk1
Stap2
Mpnd
Kctd1
Tex46
Cadm4
Kcnj2
Eva1a
Tgfb2
Lactbl1
Albfm1
H2-Eb1
Hemgn
Slc2a2
Xdh
F9
Olfr66
Cd163l1
Cyp7a1
Myl1
Sh3pxd2a
Tcaf3
Cyria
Kcna3
Olfr524
Olfr1451
Krtap19-5
Krtap19-4
Malrd1
Adra2c
Cd226
Gsx2
Gsdma2
Vmn1r175
Zfp108
Sim2
Zfp93
Tmem220
Plac9b
Plac9a
Gm9780
Syngap1
Cuta
Gm10778
Klri1
Rasal3
Olfr1420
Npr3
Bhmt
Cldn34d
Rpl36a
Syt3
1700008O03Rik
Ptprb
Olfr1200
Olfr1199
Serpina3i
Hnrnph2
Gla
Myo1d
Zfp821
Csk
Herc1
Olfr774
Begain
Olfr775
Knl1
Arpin
Tmem30b
Dab2
Cstdc2
Myl3
Gabrp
Rhd
Olfr1364
H1f3
H4c6
H3c7
H2bc9
Prkcb
Icosl
Vmn1r207
Il13
Klk1b8
Jaml
B4galt4
Taar3
Taar2
Cgrrf1
Usp17lb
Smpd3
Adam26a
Fmc1
Derl3
Psmf1
Tmcc3
Apoh
Adra1d
Syp
Ikzf4
4930438A08Rik
Exosc2
Olfr761
Dytn
Acap1
Col18a1
Neurl4
2810408A11Rik
Vmn1r171
Jund
Gfra2
Hes7
Aloxe3
Cped1
Zfp33b
Slc4a8
Osbpl10
Hnrnpr
Sirt2
Nfkbib
Ghrhr
Nfasc
Nanos2
Stbd1
Cul2
Zeb2
4930568D16Rik
Epb41
Rgr
Lrit1
Olfr121
Pde4a
Scgb2b2
A530032D15Rik
Srsf3
Rnf103
Ccng2
Tmem64
Plekhg1
Ptp4a1
Rgs9bp
Ankrd27
Mff
Zfp275
Cbll1
Dpyd
Btbd8
Tbcel
Casp8ap2
Gm4787
Med18
C130073F10Rik
Vmn2r79
Gm38510
Cables1
Scn3a
Usp26
Clrn3
Oas2
Fibp
Ccdc85b
Exoc6b
Gk
Cmpk1
Slc17a6
Zfp759
Lmo3
Fmod
Psg17
Apba2
Htr4
Lamp5
Nsmaf
Pabpc5
Igbp1b
Dcaf12l2
Arhgap15
Abcc3
Olfr1377
Nrep
Slc34a2
Adamtsl1
Olfr711
Tgfbr2
Rftn1
Frmd4b
Tmem101
Fbln5
Tesmin
Klrb1
Slc18a2
Lrrn1
Cbr3
Srgn
Orai1
Cgn
Tbc1d8
Coro6
Dagla
Bsx
Meikin
Casp14
Olfr1441
Otol1
Fcgr4
Ct55
Acnat2
Spata6
Npm2
Crym
Abca14
Jag1
Slc4a7
4930519L02Rik
Mecom
Shisa7
Prl7b1
Gnal
Acsl6
Gata2
Lce3c
Lce3b
Lhx1
Eda
Rdh8
Col5a3
Rnf13
Ddx58
Cfap54