ChIP-Atlas: Target genes

Potential target genes for Rara

Query protein: Rara
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX208055 | ES cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
Rara's Target genes

◢ Rara: Average

◢ SRX018669: ES cells

◢ SRX10562781: ES cells

◣ SRX208055: ES cells

◢ SRX208062: ES cells

◢ SRX520462: F9

◢ SRX520468: F9

◢ SRX520474: F9

◢ SRX520479: F9

◢ SRX3301664: Forelimb

◢ SRX3301665: Forelimb

◢ SRX4369776: Germline stem cells

◢ SRX4369779: Germline stem cells

◢ SRX4369782: Germline stem cells

◢ SRX4369785: Germline stem cells

◢ SRX337439: Liver

◢ SRX018670: mESC derived neural cells

◢ SRX118692: mESC derived neural cells

◢ SRX118693: mESC derived neural cells

◢ SRX675957: Th1 Cells

◢ Rara: STRING

Txndc11
Greb1
Tex14
H1f3
H2bc8
H2ac8
H3c6
Eapp
H3c2
H2ac4
H4c2
H4c1
H3c1
H3c3
H2bc3
Nkx2-6
H4c3
H1f6
H1f2
H3c11
H2bc22
H2ac22
H1f5
Sfi1
Eif4enif1
BC107364
H3c8
H4c6
H3c7
H2bc9
H2bc12
H2ac12
H4c9
H2bc11
H2ac11
H2bc4
H2ac6
Sspn
H4c14
H3c13
H2bc18
H2bc6
H4c4
H3c4
H2bc7
H2ac7
H4c11
Aldh9a1
Gm3448
Gm3417
9030025P20Rik
Il31ra
H3c10
H2bc13
H2ac13
H2bc14
Arl4d
Ttc39d
H4c8
H2ac10
Gm3435
H2bc1
H2ac1
Hexb
Mpp7
H1f1
Gtf2a1
Unk
H3f3b
H4c12
H2bc15
H2ac15
Zbtb4
Slc35g3
Polr2a
H4f16
H2aj
Tcte3
Ermard
Fcgr4
H4bc24
H2bc23
H2ac24
H2ac23
H4c17
Olfr806
H4c18
H3c15
H3c14
H2ac19
H2ac18
Olfr215
Dpagt1
Hmbs
H2ax
Mphosph9
2810006K23Rik
Kpna1
Rps20
Atp1b2
Insig1
H2bc21
H2ac21
H2ac20
Gtf2b
Errfi1
Cdkn1a
Sirt4
Jund
Iqcn
Ubb
Taf12
Gmeb1
Dlg3
Olfr564
Fmo4
Gm10710
Dchs2
Csrnp2
Lrrtm4
Il23r
Zbtb37
Wasl
Sult1b1
Dnah7b
H1f4
Cerk
Fam53c
Cdc25c
Ubqln5
Abhd6
Cox8c
Tmem230
Pcna
Cds2
Tsc22d1
Eif4b
Rcl1
Aplp2
Fam110b
Vmn2r72
Olfr1274
Magee2
Poldip3
Prdx1
Slc18b1
Rps12
Rad23a
Calr
Ing1
Cars2
Gm51425
Spin2d
Taf4
Hnrnpab
Rtl8b
Gadd45a
Hsd3b5
Cd209a
4930486L24Rik
Pnp
Mybpc3
Reg2
Btg2
Fyco1
Etfdh
4930579G24Rik
Rps3
Tomm7
Tmem129
Tacc3
Slbp
Spg11
Phf3
Rpl3
Syngr1
Skp1
Cspg4b
Hexim1
Uchl1
Nufip2
Tmem87b
Olfr470
Pstk
Sgf29
Arl6ip1
Arl15
Sde2
Hectd4
Fut8
Gm8765
Fus
Ppp1r10
Mrps18b
Atat1
Rnf19b
Vmn1r149
Vmn1r101
Crisp2
Hspa5
Nwd2
Actb
Setd4
Cbr1
Klf5
Nabp1
Txnip
Btg1
Napepld
LOC666331
Gm11634
Olfr924
Olfr1496
Olfr1495
Dtx4
Gm6551
Lipo3
Fancc
Kifap3
Dhx8
Calm2
Dynlt1b
Utp14b
Acsl3
Sub1
Rab13
Gm8126
Rps27rt
Rps27
Jpt1
Smc3
Fig4
Ak9
Zfp119a
Mylip
Sf3b5
Rft1
Olfr142
Pgk2
Mcl1
Tmem209
Ssmem1
Rdm1
Olfr165
Mbtps1
Haus1
Atp5a1
Ccnt1
4930415O20Rik
Lyplal1
Nubp1
Hoxb13
Mat2a
Rack1
Dnajb9
Gm13057
Gm13040
Olfr1095
Taf13
Tmem167b
Smarca5
Zfp982
Cldn34c4
Rfc3
2410002F23Rik
Nlrp1b
Srsf3
Raver1
Slc9a1
Senp3
Eif4a1
Cd68
Sf3b1
Sap18b
Sap18
Olfr1196
Arrdc2
Txndc8
Rcc1
Hsp90aa1
Itpr1
Cited2
Eif4g2
Kmt5b
Dgat1
Scrt1
Gls
Ints6
Snrpa
BC024978
Gfpt2
Eloc
Tmem70
Tubb4b
Stpg3
Slc34a3
Fam166a
Nbeal2
Ccdc12
Snx11
Tjp2
Rps6
Kcnh8
Phf10
Hnrnpa2b1
Cbx3
Taf1d
4931406C07Rik
Rpl13
Mre11a
Ankrd49
Olfr1154
Ppp1r2
Mtln
Nphp1
Zfp619
Mrps35
Wwox
Polg2
Ddx5
Cep95
Ptpa
Crat
E030030I06Rik
Olfr1193
Wiz
Aqr
Olfr908
Olfr907
Olfr982
Dusp1
Znfx1
H2-DMa
Brd2
Tas2r123
Zfp945
Plscr4
Mtf2
Clcn4
Dnajb14
H2az1
Rhox9
Idh3b
Rpl17
BC031181
Hspa1b
Gbp8
Prpf3
Rbmx2
Taf4b
Ccnq
Rbm25
Olfr38
Fgf4
Olfr585
Rita1
Ddx54
Mak16
Rps5
Rnf225
Slc25a2
Aadacl2fm1
Mknk2
Rplp0
Gcn1
Tmpo
Col6a6
Ippk
Tmprss11d
Fam170a
Cep43
Rps28
Ccdc86
Pmch
Enox2
Calm1
Ankrd11
Ddx23
Gm525
Hmgb2
Rabggtb
Msh4
Snrpb
Wsb1
Poli
Zfp959
Tob1
Ctsl
Ms4a20
Sertad1
Tkfc
Ddb1
Serbp1
Serpinb5
Ttc8
Pdss1
Rps23
Tmem50a
Syf2
Rsrp1
Lsm2
Hspa1l
Hspa1a
AW209491
Gm46430
Uspl1
Hnrnph1
Depdc7
Rpl12
Lrsam1
Thoc1
Psg26
Cftr
Rpl9
Lias
Olfr63
Olfr197
Olfr196
Slirp
Nrp
Alkbh1
Taar6
Ubc
Taar7a
Vps52
Rps18
B3galt4
B4galt3
Sphk2
Spaca4
Rpl18
Fam83e
Caprin2
Ddx11
Gk5
Slc24a1
Rps9
Zfp119b
Ebi3
Tsen34
Ints14
Mrpl30
Mitd1
Top2a
Olfr785
Pate7
Gpx4
Ccnyl1
1700020N15Rik
Ndufb8
Rpl3l
Rps2
Rnf151
Ndufb10
Degs1
Hif1an
Timm44
Olfr1135
Gtf2f1
Srsf6
Utp3
Prame
Olfr773
Lipo2
Sugp1
Mau2
Oog3
Oog1
Tnrc6c
Smndc1
Pole4
Pcm1
Srsf2
Mfsd11
Mettl23
Jmjd6
B4galnt2
Dtna
Eif4a2
Teddm1a
Glul
Slc2a1
Upf3a
Ttc17
Gm10573
Rcan2
Srsf1
Sin3b
Sytl3
Resf1
Ifna16
Rsph3b
Rab7b
Fos
Sgpl1
Dcp2
Trmt10c
Pcnp
Dars
Hells
Ss18
Slc38a2
Styxl1
Mdh2
Arc
Drg1
Apc
Otub1
Zzz3
Mrpl39
Pcca
Zcchc9
Rai2
Dck
Yars2
Mterf1b
AU041133
Efcab14
Rplp2
Slc25a22
Pidd1
Trim17
H3f4
Ftl1
Bax
Rpl23
Rpl8
Commd5
1700001P01Rik
H2bu2
Trip4
Pclaf
H2aw
Ergic2
Olfr418
Apcs
Dhx9
Paxip1
Dynll1
Thap11
Nutf2
Cenpt
Gtpbp10
Olfr54
Arhgap19
Tmem79
Smg5
Fam43a
1700019D03Rik
Cabyr
Vmn1r56
Nop14
Grk4
Sf3b3
Cog4
Nop58
Ermp1
Kpna2
Frg1
Zfp207
5730455P16Rik
Olfr834
Vmn1r193
Cbr3
Usp4
Gpx1
Ndufaf3
Impdh2
Dalrd3
Gm8165
Tfrc
Map3k7
Rpl15
Nkiras1
Serinc3
Npm1
Ywhaq
AW549877
Tubgcp5
Rrp15
Hjurp
A730008H23Rik
Klf6
Mterf1a
Ccdc110
Ier5l
Tmem270
Cldn13
Zfp981
Denn2b
Snx5
Mgme1
Rpsa
Psme2b
Osbpl1a
Lsm14a
Matr3
Amd2
Amd1
Pitrm1
Rbm39
Ppp1r8
Rpl37a
Qrich1
Qars
Rhox3e
Rhox2e
Marchf3
Ociad1
Gm7714
Tmem41a
Atf7ip2
Gtf2a2
Dmxl1
Mrpl45
Zc3h13
Parpbp
Nup37
Ier5
Rbmxl2
Sult2a5
Surf6
Surf2
Surf1
Rpl7a
Med22
Pxt1
Kctd20
Pdhx
Apip
4932438A13Rik
Slc5a6
Cad
Atraid
Gbe1
Olfr340
Ifna13
Pramel32
Kctd5
P4hb
Arhgdia
Eif3a
Seh1l
Mrpl35
Immt
Aaas
Slc3a2
Rps24
Polr3a
Tm2d1
Hnrnpf
Olfr294
Gemin6
Srsf5
Dppa5a
Pfdn2
Nit1
Shroom4
Slc24a4
Zbed5
Chchd2
Clec4b1
Gnb4
Dbr1
Armc8
Rcn2
Rpl10a
Eef1e1
Olfr124
Kcnab1
Dner
Slc25a30
Commd1
Setd5
Tcf15
Cct4
AA467197
Pld5
BC005537
Rbm4b
Surf4
Stkld1
Olfr362
Zbtb11
Cdkn2aip
Map1lc3b
Rpl24
Orc5
Hspa4
Mphosph10
Mcee
Selenok
Kntc1
Mapk1
Pik3r3
Gm11213
Crygn
Prorsd1
Bbs10
Olfr641
Tm7sf3
Med21
Creb3l3
Eif1
Map2k2
Puf60
Cyb5r1
Dtd2
Cisd2
Igfbp7
Nat10
Olfr461
Clk1
Urgcp
Mrps28
Smurf2
Ctdp1
Mob1b
Usp53
Ahctf1
Prx
Wipf2
Rplp1
Topbp1
Gm2237
Rnf4
Msh6
Sgk1
Trp53inp1
Mrpl21
Ighmbp2
Bclaf1
Psme4
Tcea1
Rnps1
Trappc6b
Pnn
Ptprr
Zswim3
Acot8
Nsrp1
Enc1
Abraxas1
Dpy19l4
Rpl21
9530077C05Rik
Anln
Vmn1r30
Slc25a10
Mrpl12
Selenof
Hs2st1
Mad2l1
Pigt
Dbndd2
Mrpl15
Hmga1b
Hmga1
AI413582
Ssbp1
Xlr3c
Gcsh
Olfr593
1810009J06Rik
Gapdh
Ddit4
Ptpn6
Grcc10
Ddx20
Tbrg1
Garem1
Ppil4
Mtif2
Kit
Ube2s
Tdp2
Acot13
Rpl7l1
2310039H08Rik
Zwilch
Snapc5
Rpl4
Tipin
Ptcra
Rpl32
Vmn1r48
Slc25a3
Rsph9
Mad2l1bp
Gtpbp2
Morc3
Zdhhc3
Exosc7
Zcchc17
Snrnp40
Tmem175
Gak
Nipa2
Snip1
Dnali1
Nprl3
Hba-x
Sh2b1
Tufm
Sephs2
Sesn2
Tra2b
Tnrc6b
Nasp
Scfd1
Rdh14
4932411N23Rik
Phf2
Rbm8a
Rps27l
Birc6
Thnsl1
Enkur
Pex11b
Aars2
Otud6b
Ubr3
Ncoa4
Csde1
Tigd2
Add3
Pbrm1
Gnl3
Smad4
Gm3411
Chd9
Atp1a1
Vcl
Rps10
Fth1
Selenos
Atf6
Mettl25
Ccdc59
Psmb2
Tuba1a
Olfr512
Trmt2a
Ranbp1
Dnajb4
Atg101
Fubp1
Wnk1
Yeats4
Vcpkmt
Cep295
Smim41
Vmn1r204
Pabpc1
1700001O22Rik
Cd81
Gclc
Rpl19
Cacnb1
Kif20a
Brd8
Hspa8
Rsph3a
Cdh1
Smtn
Atg16l1
Rpl31
Yes1
Gm11564
Il18r1
Tmem191c
Trpm3
Slc39a4
Cpsf1
Zfp600
Peli1
Ptp4a1
Pura
Ppp2r2a
Zfp991
Zfp978
Eef1akmt4-ece2
Eef1akmt4
Alg3
Msra
Zfp11
Ier2
Grasp
Iqsec1
Epc1
Slc30a6
Mrpl28
Fam174c
Cirbp
Wdr83os
Wdr83
Zbtb6
Rc3h2
Dus4l
Cog5
Gm5741
Dhps
Rpl35a
Lmln
Iqcg
Nfe2l2
Tigar
Rps13
Rbm12
Cpne1
Cdc37l1
Cox7b2
Mthfd2
Mob1a
Pou2f2
Dhx30
Zfp433
Gm32687
Hpf1
Inpp5k
Zfp980
Cpm
Rps7
Tmem183a
Arhgap21
Bzw2
Ankmy2
Fam204a
Atp9b
Eef1akmt2
Abraxas2
Rab21
Tmem238
Tmem190
Rpl28
Il11
Wdr43
Tmx3
Usp16
Zfp944
Zfp758
Wdr77
Atp5pb
Depdc1a
Hibadh
Ppp2r1b
Nob1
Olfr1388
2410141K09Rik
Zscan25
Olfr1387
Usp42
Tulp4
Canx
Mtfr2
Hspa9
Zfp786
Zfp398
Rps11
Mtg1
Rpl13a
Flt3l
Tmsb4x
Tpst1
Fgfbp3
Sik2
Id1
Tsnaxip1
Ranbp10
Dcp1a
Ptpn2
Rpl37
Card6
Btaf1
Gtf3c2
Olfr746
Tubb2b
Psmd7
Pradc1
Cct7
Tac4
Luc7l
Fam234a
Ppan
Angptl6
Rpl27a
Shfl
Tubgcp6
Hdac10
Clca3a2
Trmt5
Slc38a6
Nup85
Mettl22
Rnf169
Arrdc3
Naa15
Mapre2
Rpl6
Yif1b