ChIP-Atlas: Target genes

Potential target genes for Rara

Query protein: Rara
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX208062 | ES cells
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Rara's Target genes

◢ Rara: Average

◢ SRX018669: ES cells

◢ SRX10562781: ES cells

◢ SRX208055: ES cells

◣ SRX208062: ES cells

◢ SRX520462: F9

◢ SRX520468: F9

◢ SRX520474: F9

◢ SRX520479: F9

◢ SRX3301664: Forelimb

◢ SRX3301665: Forelimb

◢ SRX4369776: Germline stem cells

◢ SRX4369779: Germline stem cells

◢ SRX4369782: Germline stem cells

◢ SRX4369785: Germline stem cells

◢ SRX337439: Liver

◢ SRX018670: mESC derived neural cells

◢ SRX118692: mESC derived neural cells

◢ SRX118693: mESC derived neural cells

◢ SRX675957: Th1 Cells

◢ Rara: STRING

Greb1
Eapp
Tex14
BC107364
H1f3
H2bc8
H2ac8
H3c6
H3c8
H4c6
H3c7
H2bc9
Txndc11
H3c2
H2ac4
H3c3
H2bc3
H1f2
Nkx2-6
H4c2
H4c1
H3c1
H2bc12
H2ac12
H4c9
H2bc11
H2ac11
H4c11
H3c10
H2bc13
H2ac13
H2bc14
H4c3
H1f6
H3c11
H2bc22
H2ac22
H1f5
H2bc6
H4c4
H3c4
H2bc7
H2ac7
Fcgr4
Unk
H3f3b
Arl4d
H2bc4
H2ac6
H4bc24
H2bc23
H2ac24
H2ac23
H4c18
H4c8
H2ac10
Zbtb4
Slc35g3
Polr2a
Gm3448
Gm3417
Gm3435
H4c12
H2bc15
H2ac15
H1f1
Olfr806
H4c14
H3c13
H2bc18
Rdm1
H2bc1
H2ac1
Abhd6
9030025P20Rik
Sspn
H2bc21
H2ac21
H2ac20
H4c17
Taf12
Gmeb1
Tcte3
Ermard
H1f4
LOC666331
Gm11634
Poldip3
Dpagt1
Hmbs
H2ax
Sfi1
Eif4enif1
Gtf2a1
Ttc39d
H4f16
H2aj
Taf4
Zbtb37
Ubb
Cox8c
H3c15
H3c14
H2ac19
H2ac18
Eif4b
Ptpn6
Grcc10
Mpp7
Gtf3c6
Hexb
Tob1
Sirt4
Errfi1
Ing1
Cars2
Atp1b2
Srsf2
Mfsd11
Mettl23
Jmjd6
Ints6
Slc18b1
Rps12
Tmem50a
Syf2
Rsrp1
Setd4
Cbr1
Ebf1
Fam53c
Cdc25c
Jpt1
Il31ra
Rad23a
Calr
Senp3
Eif4a1
Cd68
Olfr564
Hnrnpab
Slc9a1
Jund
Iqcn
Mphosph9
2810006K23Rik
Gtf2f1
Npm1
Aadacl2fm1
Clcn4
Smc3
Arrdc2
Tmem107
Csrnp2
Olfr1193
Pnp
Eif4g2
Wwox
Tex19.1
Klf6
BC005537
Cerk
Med1
Cdk12
Rcl1
Nabp1
Rpl27
Ifi35
Kpna1
Ifrd1
Olfr1274
Rack1
Ftl1
Bax
Rpl15
Nkiras1
Sgf29
Gfpt2
Smarca5
Rpl3
Syngr1
Ccdc110
Ubqln5
Ccn2
Urgcp
Dhx9
Nufip2
Hexim1
Hspa5
Ier2
Epha4
Pik3r3
Insig1
Polg2
Ddx5
Cep95
Ier5l
Slc25a4
Wsb1
Sf3b1
Tmem230
Pcna
Cds2
Atg4c
Eif4a2
Trpm3
Hsp90ab1
Slc35b2
Tfrc
Srsf3
Sde2
Gadd45a
Gm10710
Dchs2
Lyplal1
Matr3
Smurf2
Dlg3
Mbtps1
Cbr3
Dhx8
Sqstm1
Tti2
Nbeal2
Ccdc12
Mcl1
Lsm14a
Taf4b
Dnajb9
Rpl13
Rpl6
Zc3h10
Rpl41
Taar6
Taar7a
Rpl23
1700001P01Rik
Lipo3
Sub1
Col6a6
Afg3l1
Zfp119b
Ebi3
Wiz
Ncs1
Mat2a
Nwd2
Tmem167b
Spg11
Naca
Kansl2
Shoc2
Bbip1
Gls
Pecam1
Nasp
Caprin2
Utp14b
Acsl3
Rab7b
Hnrnph1
Snrpg
Fam136a
Tmpo
Pafah1b1
Btg2
Nme1
Hoxb13
Cdc5l
Hspa8
Pkm
Mrpl39
Sult1b1
Ddit4
Phf3
Nop58
Fut8
Taf13
Ptpa
Crat
Cbx8
Snf8
Gip
Peli1
Kpna2
Wasl
Hsp90aa1
Rfng
Gps1
Plscr4
Marchf3
Trim17
H3f4
Pabpc1
Txn1
H2bu2
H2aw
Eef1e1
Rps24
Polr3a
Tigd2
Med6
Zfp119a
Snrpb
Srsf1
Rpl9
Lias
Snrpn
Dynll1
Gm13057
Gm13040
4930486L24Rik
Lman1
Pdhx
Apip
Ppia
Gm6551
Rpl26
Uhrf1bp1l
Znfx1
H2-DMa
Brd2
Mknk2
Myo1g
Tsc22d1
Pbk
Etfdh
4930579G24Rik
Arc
Tmem270
Cldn13
Pole4
Tas2r123
Fyco1
Rpl3l
Rps2
Rnf151
Ndufb10
Fig4
Ak9
Kifap3
Ksr1
Gtf2b
Hmgb2
Arl6ip1
Zfp959
Kat6a
Mre11a
Ankrd49
Mest
Hjurp
A730008H23Rik
Fus
Sod1
Rnf149
Cabp2
Tac4
Denn2b
Zfp943
Zfp942
Fam174c
Cirbp
Ap1g1
Rcc1
Nfat5
Cd2
Fam98b
Zwilch
Snapc5
Rpl4
Aqp8
Rps27a
Clhc1
Rtcb
Gm17660
Shank1
Clec11a
Myo18a
Por
Tcea1
Dnajb14
Ctnnb1
H2az1
Thoc1
Maml1
Ncl
Rtn4
Drg1
Olfr1496
Olfr1495
Hpf1
Pigg
Vmn2r72
Rps20
Uqcc3
Ints5
Ganab
1810009A15Rik
Lbhd1
Atp1a1
Amd2
Amd1
Btg1
Styxl1
Mdh2
1700001O22Rik
Selenot
Upf3a
Ppil4
Rps15a
Pomc
Ndufaf3
Impdh2
Dalrd3
Trim41
Srsf5
Kif2c
Mterf1b
B4galt3
Psme4
Srrm2
Magee2
Ppp1r15a
Plekha4
Cftr
Nxf1
2610042L04Rik
Aldh9a1
Hgsnat
Tubb4b
Stpg3
Slc34a3
Fam166a
Dusp1
Rab42
Slc36a1
Frg1
Rhox9
Tial1
Prdx1
Snx18
Rps26
Sp8
Zfp36l1
Hnrnpa2b1
Cbx3
Ier5
Zfand5
Rps6
Surf6
Surf2
Surf1
Rpl7a
Med22
Mak16
Cldn34c4
Elp5
Ctdnep1
Rita1
Ddx54
G3bp1
Atox1
Dars
Fntb
Kcnh1
Gapdh
Prss35
Clec4b1
Zfp981
Sephs2
Vcpkmt
Sertad2
Cop1
Cd209a
Klf2
Cited2
Ulk2
Rcn2
Rps8
Clu
Dgat1
Gm3667
Fancc
Ahctf1
Usp4
Gpx1
Arrdc3
Gm8126
Hsd3b5
Dhx30
Oog3
Calm1
Rhob
Traf7
Rab26
Qrich2
Timm22
Nxn
Dtx4
Tbrg1
Tuba1c
Ppp1r8
Pts
Tmub1
Fastk
Agap3
Aqr
Canx
Sost
Sytl3
Olfr412
Ube2s
Hoxb4
Hoxb5
Acly
Tmem79
Smg5
Appl1
Ankfy1
Reg2
Cyp17a1
Cdh1
Spin2d
Ccnt1
4930415O20Rik
Slc2a1
Snx5
Mgme1
Cep295
Olfr142
Ubac2
Pstk
Fam110b
Scfd1
Olfr641
Esr1
Cltc
Ppcdc
Tomm7
Stmn1
Chmp6
Gm10573
Rpl35a
Lmln
Iqcg
Tma16
Tent5c
Calm2
Agpat2
Srp54c
Il23r
Oxnad1
Dph3
Pex3
Adat2
Pou5f1
Rbbp7
Ptcd3
Polr1a
Tnrc6c
Ncoa4
Pradc1
Cct7
Tmprss11d
Cep43
Scnn1g
Zfp982
Rpl19
Cacnb1
Yeats4
Slc5a10
Lrrtm4
Srp19
Hspa9
Olfr340
Nudt1
Mrm2
Lynx1
Setd5
Crlf3
Atad5
Ly6d
Mex3a
Rnf19b
Klf7
Slc25a3
Rps3a1
Ptma
Mtpap
Mtf2
Mylip
Ndufb8
Ppp1r10
Mrps18b
Atat1
Adpgk
Nfkbia
Zfp963
Hif1an
Spata20
Trmt10a
Mttp
Psma4
AY074887
Nxph3
Xlr3c
Fam170a
Ttc12
Rprml
Lyzl6
Idh3b
Fxn
Mrpl35
Immt
Rrp15
Srp68
Galr2
Teddm1a
Glul
Tra2b
Atf2
Ccnq
Srcap
Olfr1388
Rccd1
Olfr1154
Olfr1387
Rnaset2b
Rnaset2a
Eef2
Dapk3
Taf1d
4931406C07Rik
Tkfc
Ddb1
Pias4
Rab33b
Rapgef6
Tsg101
Atp6v0a1
Tdp2
Acot13
Prpsap2
Rnf7
Jade1
Dus4l
Cog5
Crls1
Cryaa
Serpinb5
Tecpr1
Recql4
Lrrc14
Fmo4
Olfr215
Rpl12
Lrsam1
Psmd5
Cutal
Lrrc24
C030006K11Rik
Ddx52
Map3k3
1600014C23Rik
Phf2
Pdia3
Catsper2
Ubr3
Bclaf1
Sphk2
Spaca4
Rpl18
Fam83e
Cabyr
Zap70
Olfr470
Olfr908
Olfr907
Ttc8
Oog1
Ifna16
Vmn1r56
Actb
Rps7
Add3
Itpa
Ddrgk1
Deaf1
Arl15
Trp53inp1
Smim7
Ppan
Angptl6
Rnps1
Adss
Ptrhd1
Cenpo
Tcta
Rhoa
Amt
Cdkn2aip
Opa1
Tm2d1
Kdm4d
Cwc15
Tm7sf3
Med21
Bcl11b
Vmn1r205
Rpl8
Commd5
Zfp945
Aoc2
Zfp207
5730455P16Rik
Psme3
Dusp4
Nprl3
Hba-x
Kansl1
Rfc3
Olfr294
Rpgrip1
Mybpc3
Rplp0
Gcn1
Rps3
Wdr82
Usp53
Zcchc9
Arl4c
Hnrnpc
Guk1
Gjc2
Snrpe
Pllp
Rps19
Rspo3
Skp1
Rps9
Tsen34
Tcf15
Ints12
Gstcd
Ccdc86
Strap
Ccnyl1
Eif3a
Ythdc1
Mapk1
Ppm1b
Ephb3
Dynlt1b
Capsl
Slc14a2
Dnah7b
Haus1
Atp5a1
Rpl17
BC031181
Rbm39
Hectd4
Ptpn2
Bckdk
Ahcyl1
Kat8
Gps2
Eif5a
Zfp143
Slc39a4
Cpsf1
Uspl1
Fos
Vps52
Rps18
B3galt4
Mtln
AU041133
Nphp1
Ptprr
Gk5
Carmil1
Olfr248
Nemf
Kctd5
Cspg4b
Nubp1
Myh10
Zswim3
Acot8
Spc25
G6pc2
Paxip1
Snx15
Sac3d1
Cfl1
Taok1
Ptpru
Mecr
1700019D03Rik
Pex12
Vmn1r149
Vmn1r101
Sptbn1
Slfn14
Nup62
Il4i1b
Atf5
Nek2
Haus4
Rab8a
Slc38a2
Dnajb1
Napepld
Serbp1
Atf6
Ergic2
Rnf34
Zscan21
Rptor
Olfr362
Blmh
Mterf1a
Acer2
Pmf1
Zcchc17
Snrnp40
Timm17a
Rpl31
4931414P19Rik
Eef1g
Trappc1
Kcnab3
Cntrob
Vmn1r48
Dnaja1
Etf1
Edrf1
Fnbp1
Slc18a1
Atp6v1b2
Tsen2
Ttc17
Nfib
Zfp654
Cggbp1
Tsn
Smc5
Zfp97
Nifk
Gadd45b
Plxdc1
Slc25a39
Rab13
Arl5c
Rps27rt
Rps27
Dbnl
Mdh1b
Fastkd2
Sp2
Ska3
Mrpl57
Osbpl1a
Gtf2a2
Odc1
Commd1
Kntc1
Foxc2
Pcif1
Mthfsd
Ube2m
Chmp2a
Mmaa
Cdc42se2
Pirt
Cct4
Mrpl17
Zfp433
Gm32687
Pigq
Nhlrc4
Copb2
N6amt1
Smndc1
Tagap1
Tnrc6b
Clcn3
Nek1
Rnasel
Rgs16
Bdh2
Tmem129
Tacc3
Slbp
Pfdn2
Nit1
Gm34653
Fbxw2
Ubap2l
4933434E20Rik
Shroom4
Atxn2l
Kat7
Kifc3
Mrps28
Actg1
Set
Rps4x
Prr14l
Depdc5
Coq3
Uqcrb
Gm10767
Pir
Rab7
Prdm10
Etnk2
Gm7244
Eef1a1
Atp6v0c
Amdhd2
Hmga1b
Hmga1
AI413582
Ren2
Ren1
Csde1
Pgrmc1
Gpr31b
Chmp5
Bag1
Rbm25
Slc5a5
Rpl18a
Map1s
Gadd45gip1
Kifc5b
Ipo7
Olfr924
Olfr165
Ogfod1
Nudt21
Gosr2
Slc4a11
Sertad1
Aplp2
Snrnp70
Pelp1
Vps36
Ckap2
Bbs10
Zfp330
1700020N15Rik
Rif1
Irgm1
Ints10
Gpx4
Txnip
Id1
Ddx3x
Gm15517
Acp4
Etfrf1
Casc1
Zfp866
Secisbp2
Cks2
Rtl8b
Mlh1
Epm2aip1
Cct5
Atpsckmt
Ndufb1
Cpsf2
Bet1
Col1a1
Arl2bp
Nt5m
Cops3
Rbm34
Ubl7
Zc3h13
Slc6a4
Pxt1
Kctd20
Rpl29
Tmem168
Slirp
Nrp
Alkbh1
Rchy1
Ccna2
Aldh3a2
Gzmk
Rnd3
Kdm3a
Ankrd11
Smyd4
Rpa1