ChIP-Atlas: Target genes

Potential target genes for Zic3

Query protein: Zic3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX12142046 | mESCs, differentiated
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Zic3's Target genes

◢ Zic3: Average

◢ SRX147572: ES cells

◢ SRX6879008: ES cells

◢ SRX7546911: ES cells

◢ SRX7546912: ES cells

◢ SRX7546913: ES cells

◢ SRX7546914: ES cells

◢ SRX823607: ES cells

◣ SRX12142046: mESCs, differentiated

◢ SRX12142051: mESCs, differentiated

◢ SRX12142055: mESCs, differentiated

◢ SRX15057955: mESCs, differentiated

◢ SRX15057958: mESCs, differentiated

◢ SRX15057960: mESCs, differentiated

◢ SRX9896071: mESCs, differentiated

◢ Zic3: STRING

Alg14
Gatad2a
Timp4
Cd38
Eno1
Atrn
Snrnp70
Zfp964
Smc6
Gen1
Pabpc1
Cul5
Enpp4
Ufsp1
Letmd1
Pitx3
Mkx
Colec12
Man2a2
Irgm1
Ywhae
Tbc1d5
Zcrb1
Pphln1
Zfp410
Donson
Gid4
Prelid3a
Znrf1
Wipi2
Apc
Pacsin2
Ints9
Hmbox1
Pou5f1
Itm2b
Grb2
Rbm47
Coro2a
Tmed7
Eif1a
Chd1
Notch2
Cep70
Plcxd1
Spata24
Fbxl7
Pxdc1
Qpct
Ptprz1
Prdm4
Faim
Polg2
Slc37a3
Pdcd2
Lama1
Lrrn4
Fbxo5
Tagln3
Nkiras2
Wsb2
Trabd
E030030I06Rik
H1f2
Zfp9
Efemp1
Coq2
Slc6a16
Slc12a4
Ubtf
Arfgef1
Cfap300
Pdia3
Catsper2
H2-DMa
Brd2
Apbb2
Asxl1
Sema6a
Abl2
Rnf114
Ddx20
Usp13
Ralb
Sfxn2
Arl3
Adnp2
Golm2
Zdhhc6
Vti1a
Klf5
Nsrp1
Msc
Tsga10
Coil
Flywch1
Mterf1b
Ppp2ca
Ddah2
Wdr59
Lefty1
H3c13
H2bc18
Mterf1a
Exoc6b
Atxn3
Sbk1
Coq8b
Ptpra
Reep2
Tmco4
Kif5c
Mbd3
Mios
B3gnt7
Nudt1
Sptb
Trim33
Dmtn
App
Rnf125
Naa16
Tmem161a
Gdpgp1
Cib1
Klhl1
Arl2
Nbea
Mapre2
Hnrnpll
Glul
Zbtb25
Zbtb1
Tmem62
Brms1l
Ndrg1
Rnf8
Prkag1
Ednrb
Sh3rf1
Marchf7
2300009A05Rik
Zfp36
Smad7
Tapbp
Mmp25
Garre1
Rmi1
Hnrnpk
Kcnn2
Arid3c
Kcnab3
Cox5a
Hmga1b
Hmga1
Tmc7
Vezt
Fgd6
Hif3a
Gjc1
Neil1
Zfp868
Mpped2
Pou2f1
Arap2
Pald1
Klhdc8b
Ccdc71
Slc16a9
Ccdc60
H3c15
H3c14
Myo10
Usp32
Arhgap32
P3h1
AU022252
Pgrmc2
Mnx1
Mapk4
Slco5a1
Tbc1d9
Chrac1
P3h2
Phlpp2
Scd1
Mapk3
Pde3a
Phc2
Prickle1
Prmt9
Ccdc30
B3gnt4
Ifitm1
Kdm2b
Ncdn
AU040320
Fam227b
Dtwd1
Abr
Cerkl
Ptch2
Tmem63b
Mrpl14
Apoe
Ppp3cb
Pvr
Msh6
Usp37
Cnot9
Lrrc8d
Slc35f2
Ptdss2
Zfp64
Pdxdc1
Mpv17l
Asap2
Hivep2
Rpp14
Htd2
Fads1
H3f3a
Smad4
Lrrn2
Rif1
Mapk14
Cdhr1
Tanc1
Spint1
Zfp976
H2az2
Wdr61
Meaf6
Tmem42
Tprn
Timm44
Exd2
T2
Rgs12
Frzb
Mt1
Casc3
Pelp1
Vrtn
Pms1
Ormdl1
Fahd2a
Slain2
Slc12a2
Terf2
Gpsm2
Crocc
Smarca1
Bcl7b
Krba1
Fam214a
Stc2
Obsl1
Inha
Sclt1
D3Ertd751e
Bcl10
Rtn4rl1
Syne1
Ssh1
Dcaf11
Poll
Dpcd
G2e3
Pnrc1
Pcif1
Ptpn14
Snn
Ipo8
Usp36
Zfp62
Vrk1
Pcgf6
Fstl1
Tmeff1
Mreg
Mylpf
Tbc1d10b
Spg20
Asap1
Pum1
Fnta
Rheb
Fcor
Ghitm
Gngt2
Abi3
Ncoa1
Ago3
Tab1
Aktip
Mrpl49
Fau
Axl
Ppp2r5b
Chgb
Hsdl1
Dnaaf1
Mllt1
Cpsf4l
Cacng7
Trim72
Chid1
Zfp341
Tha1
Proser2
Iars2
Tfeb
Utp15
Ankra2
Tmem178
Cachd1
Slc25a22
Ptk7
Adam22
Rtkn
Dlc1
Abca8b
Ppat
Paics
Scaf11
Zkscan5
Mboat1
Tulp4
B3gnt2
Stx11
Stk32a
Hs3st5
Slc9a3
Mthfd2l
Dhx32
Rab4a
Hdac1
Mrps15
Tdrd3
Sec22c
Kctd9
Cdca2
Cacng2
Ttc21b
Tcf7l2
Gcn1
Mapk8
Cep63
Anapc13
Ap3b2
Hectd1
Car14
Tmem131l
B4galt2
Rbm45
Zfp787
Il1rapl1
Dynll2
Nacc1
Fam118a
Trmt1
Tle4
Hcfc2
Ccn2
Serp1
Eif2a
Hnrnpa2b1
Cbx3
Pcbp1
Nphp3
Shoc2
Bbip1
Phf10
Cep112
Nyap1
2610528J11Rik
Set
Pdrg1
Sphkap
2210016F16Rik
Usp10
Ugp2
Il17d
Dnajc10
Prex1
Cyp4x1
Ubtd1
Mms19
Ptdss1
Mterf3
Numa1
Tpd52
Tpm1
Cdkl2
Tor4a
Kctd12
Trip12
Fbxo36
Ptprg
Epn3
Lrrc8b
Rsph4a
C1ql1
Cnn3
Rest
Pum3
Ust
Ropn1l
Tgfbr3
Serpini1
Pdcd10
Parp6
Adgra2
Slc14a1
Camk1d
Ttc9b
H6pd
Cdkn2aip
Yars2
Csnk2a1
Klc3
AB010352
Baz1b
Chrna9
Actn1
Prkar1a
Tef
Psd3
Dmap1
Prmt8
Exosc6
Gapvd1
Ghr
Zyg11a
Btf3l4
Txndc12
Ltb4r2
Trim25
Ksr2
BC107364
Arhgap29
Mmp15
R3hdm2
Pdp2
Cd24a
Il17rd
Malt1
Coa4
Phf20
Shroom3
Slc35d1
Cnbp
Utp14b
Acsl3
Slc5a6
Atraid
D5Ertd579e
Socs2
Zfp286
Stmn1
Mad2l2
Draxin
Clasp2
Gsx1
Spink2
Rprd2
Eif4e
Slc4a2
Ost4
Pcbp2
Tbl1xr1
Fbxl15
Rragd
Tmem229a
Tmem121b
Ube2d1
Cep55
Sugt1
Cand2
Col5a1
C2cd2
Retreg1
Tmem198
Chpf
Mafg
Suz12
Tbc1d4
Utp23
Neil2
Sec22b
Trim68
Xpo6
Adnp
Pnkd
Faap20
Aamp
Shox2
Csrp2
Clcn4
Chst15
Hapln4
P4hb
Mael
Cnot2
Nectin2
Vti1b
Ubr5
Map1lc3a
Tgfbr1
Rtcb
Tatdn3
Nsl1
Atad2b
Steap3
Pdpr
Pkm
Loxl3
Dok1
Hoxc13
Hinfp
Epm2a
Speg
Nfatc3
Srd5a3
Dab1
Tvp23a
Setdb2
Gm45935
Cab39l
L3mbtl2
Dennd1a
Dhrs7b
Gtf2a2
Pygo2
Lama5
Fbp1
Nmnat3
Tcirg1
Trim7
Pik3r3
Dmkn
Cltc
Nefh
Ap1b1
Mapkapk5
Rnaset2b
Rnaset2a
Snx17
Eif2b4
Klhl34
Moxd1
Lgmn
Gtf3c4
Sowahc
Septin10
Rock2
Ccdc9
BC031181
Clasp1
Togaram1
Klhl28
Dctn4
Pdgfra
Dpf1
Zdhhc2
AI413582
Rbpjl
Sco2
Dus2
Ddx28
Clip4
Dsn1
Shprh
Nup85
Tafa3
Fbrsl1
Gabrb3
Slc31a1
Fkbp15
Nt5c3
Bag3
Mettl14
Spag4
P2ry1
Cand1
Cd300lg
2510009E07Rik
Fam241b
Yod1
Adgrb3
Fam136a
Dennd2c
Rab37
Map3k20
Plcb4
Skil
Tfg
Setx
Slc19a1
Arhgap42
Napepld
Gch1
Pacsin3
Snca
Ttc14
Syde2
Ptpn3
Slc13a2
Rbm24
Ido1
Glra1
Mob1a
Ginm1
Cdh11
Slc46a3
Itga1
Entpd4b
Entpd4
Gls2
Klhl13
Fgf4
Eif4g2
Got2
Snx15
Hr
Cpxm1
Wdfy3
Atrnl1
Prlr
Atg5
Ift140
Cramp1l
Kcnj4
Bcl7c
Sbno2
Aff4
Cfap97
H1f4
Tiparp
Plekhh1
Gja4
Fn1
Lypd6b
Wscd2
Lpar2
Stra6l
Gm10318
Vwa8
Btla
Vdac3
Ppm1n
Mturn
Appl2
Pld6
Il18
Bco2
Cd47
Igf2bp3
Tmem189
Slc39a8
B4galt7
9930012K11Rik
Wwtr1
Arhgap24
Prkab2
Jade3
Fam102a
B230219D22Rik
Layn
Pdzd2
St6galnac2
Csk
Mycl
Ppp2r3a
Gne
Slc17a5
Plaat3
Cfap20dc
Lsm14b
Mnt
Vsx1
Tfpi
Ncoa2
Vgll3
Kcnq3
Trerf1
Ece1
Zyg11b
Cds2
Agfg1
Prnp
Prn
Ptpdc1
Gm19668
Stard6
4930503L19Rik
Eml6
Zfp996
Rcsd1
Magi3
Zhx1
Castor1
Zfp319
Usb1
Npc1
C1ql3
Utp18
Mbtd1
Smarce1
Caps2
Pdik1l
Sqstm1
Parp8
Prom1
Rrbp1
Pcdhgb6
Camk2n1
Mfsd11
Srsf2
Trip10
Sf3b3
Cog4
Ndufa6
Wsb1
Slc40a1
Borcs5
Unc5b
Dpf3
Slc27a2
Ncoa7
Ypel1
Trmt61a
Gm17660
Gm3285
Col26a1
Sh3gl3
Camta2
Xbp1
Gna13
Tox
Fbxo10
Nid2
Cit
Kcnip4
Slc10a7
Rbmxl1
Fam107a
0610010K14Rik
Abi2
Stam2
Rassf8
Tle6
Cdk19
Psap
Phldb1
Cct2
Scrn3
Cir1
Csde1
Oplah
Ubr7
Zfp687
Cxcl11
Plekha7
Mical1
Secisbp2l
Tspan2
Chd6
Avl9
Ggnbp2
Sntg1
Pdha1
Snap29
Pi4ka
Tmem214
Sorl1
Rasgrp2
Atp1b2
Syne2
Pcmt1
Lats1
Pdlim3
Tlcd2
Immp2l
Zbtb12
Rrm2
Gpr107
Sap18b
Sap18
Pcdh9
Msrb2
Mov10
Rybp
Phlda3
Tppp
Foxp1
Sbk2
Erc1
Slc39a4
Cdr2l
Wtap
Rin2
Umad1
Rpa3
Mfap3l
Tmem119
Ndfip2
Ngf
Soat1
Gabpb1
Mycbp2
Glra3
Phyhipl
Dusp10
1700056E22Rik
Tmem44
Gm3739
Wdr20
Stx8
Cfap52
Herc6
Rmdn1
Rpl10a
Akt2
Trim36
Fbxo25
Smim1
Myo1e
Rbms1
Hacd3
Clic4
Pik3cd
Parp12
Ntng1
Mpc2
Dcaf6
Kank2
Ppp1ccb
Ppp1cc
Marchf1
Nadk2
Dyrk4
Cap1
Slc35a2
Gm9736
Crh
Mtap
Fbxo11
Krtap10-4
Extl3
Kmt5b
Epb41l4a
Myadml2
Dgkh
Slc30a9
Smndc1
Gm3448
Gm3417
Gm3435
Zfand6
Wnt16
Ndufab1
Jade1
Reln
Actn2
Actr10
Psmg1
Arhgap19
Slc9a3r1
Klf6
Ap1g1
Ldlrad4
Perp
Gm9508
Slc66a2
Cdk6
Mink1
Mylip
Spred1
Tdp2
Acot13
Adra1a
Cmas
Jpt1
Dph5
Dner
Galk1
Fbxo34
Kif5a
Hmgxb4
Ap1g2
Ptpre
Ppp1r14a
Dvl1
Maz
Sdc4
Tlr2
Scrt2
Gm3173
Srpr
Foxred1
Sf3a1
Ccdc157
Esrrb
Tspan17
Cracr2a
Cuedc1
Fignl1
Zbtb18
Fam53a
Arih2
Uqcrq
Fam20b
Camkv
Hmgb3
H1f5
Tepsin
Ndufaf8
Tsc22d3
Suclg2
Tcf12
H3c11
Maneal
Fut10
Gls
Mtfr1l
Foxo6
Tafa5
Mxd3
Cdc16
Raph1
Afg1l
Hhex
Ppp1r3c
Glcci1
Gosr2
Slc25a44
Zfp598
Khnyn
Cbln3
Sgk1
Mmp11
Chchd10
Wipf1
Ddx3x
Zfp941
Lhx1
Cops3
Kcnq1
Plekhd1
Cd63
Wnt11
Tbx1
Garnl3
Atp1b1
Lifr
Fam90a1b
Apoo
Gmeb2
Cystm1
Zfp143
Thsd7a
Gjd2
Dnajb2
Spop
Cluh
Gm2696
Rnf216
S1pr1
Zfhx3
Zfp788
Otud1
Afap1l2
H3f3b
Hpca
Gpbp1
Klhl22
Epb41l4b
Ddx60
Ppm1a
Frmd6
Prpf3
Klf1
Mob1b
Phf12
Tmem104
Nat9
Gas2
Fancf
Brpf1
Igfbpl1
Stk32b
Ctbp2
Atxn1
Vars
D17H6S56E-5
Tc2n
Mpc1
Dnajc15