ChIP-Atlas: Target genes

Potential target genes for Zic3

Query protein: Zic3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX6879008 | ES cells
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Zic3's Target genes

◢ Zic3: Average

◢ SRX147572: ES cells

◣ SRX6879008: ES cells

◢ SRX7546911: ES cells

◢ SRX7546912: ES cells

◢ SRX7546913: ES cells

◢ SRX7546914: ES cells

◢ SRX823607: ES cells

◢ SRX12142046: mESCs, differentiated

◢ SRX12142051: mESCs, differentiated

◢ SRX12142055: mESCs, differentiated

◢ SRX15057955: mESCs, differentiated

◢ SRX15057958: mESCs, differentiated

◢ SRX15057960: mESCs, differentiated

◢ SRX9896071: mESCs, differentiated

◢ Zic3: STRING

Rpp14
Htd2
Jade3
Tmem117
Atxn3
Cacng2
Caps2
Smc6
Gen1
Ube3c
Glra1
Fam118a
Sgk3
Dmap1
Timp4
Pdrg1
Tfg
Dnttip2
Vrtn
Trabd
Chst13
Grb2
Tusc1
Wdr59
Serpini1
Pdcd10
Rtcb
Faim
Rbm45
Sap18b
Sap18
Slc14a1
Mterf1b
Gm3285
App
Grap2
Tmcc1
Rarres1
Frg2f1
Foxj3
Prdm4
Colec12
Bcap31
Abcd1
Trim66
Fbxo5
Mterf1a
Pvr
Prrc1
Chid1
Tmem131l
Stx8
Cfap52
Trmt1l
Swt1
Trp53bp1
Zcrb1
Pphln1
Qpct
Tfe3
Tmcc2
B4gat1
Prkag1
Bod1l
Ppp2ca
Ufsp1
Cerkl
Terf2
Pccb
Phactr2
Chd1
Togaram1
Klhl28
Sbk2
Ap1g1
Iapp
Car14
Wdr61
Fam227b
Dtwd1
Lpar1
Dhx32
Fahd2a
Fam241b
Arhgap42
Clk1
Klhl13
Ccdc30
Polg2
Ptdss1
Mterf3
Hmgb3
Tagln3
Zfp977
Ywhae
Ppp1r8
Cep112
Exd2
Gpr68
Rassf1
Tulp4
Atrn
Gm10318
Klhl34
Pdcd2
Itga9
Tmed7
Eif1a
Arl2
Napepld
Zbtb24
Sec22b
Il1rapl1
Prnp
Prn
Nadsyn1
Dhcr7
Oas1a
Fam169b
Timm44
Mkx
2410141K09Rik
Rbm47
H2az2
Noxo1
Gfer
Hif3a
Zfp868
Recql4
Lrrc14
Zfp976
Hax1
Oplah
Mettl14
Tbc1d5
Aasdh
Zkscan17
Cuedc1
Zfp410
Slc17a5
Gdap1
Fam90a1b
Apoo
Ido1
Myo1e
Fam136a
Nrxn3
Slc37a3
Akip1
Shmt1
Sdhaf4
Txlng
Cdhr1
Arap2
Lama1
Gprc5a
2210016F16Rik
Vstm2l
Slc12a2
Slc39a4
Mtfr1l
Serpine1
Laptm4b
Cds2
Atg5
Fndc3b
Dcaf11
Il17rd
Sclt1
D3Ertd751e
Gabrb3
Apold1
Alg14
Fbp2
Man2a2
Umad1
Rpa3
Rnf8
Slc7a9
Crocc
Ddah2
Ryr2
Prex1
Nkiras2
D5Ertd579e
Ift140
Cramp1l
Mllt1
Bdkrb2
Pou2f1
Pdpk1
Rgs12
Stk38
Cxcl11
Sec24d
Arl6
Mbd3
Rnf125
R3hdm2
Tmco4
Lsm14b
Apbb2
Mpped2
Arid3c
Abcg2
Nefh
Ap1b1
Slc31a1
Fkbp15
Tlr2
Trim72
Tmeff1
Ap1g2
Pex11g
Ppp2r5b
Ntn4
Fus
Adnp
Spata7
Mapk14
Slc26a8
Slco5a1
Poll
Dpcd
Bloc1s5
Rbpj
Ptprz1
Chrac1
Utp15
Ankra2
Mindy2
Wbp11
BC049715
Adam22
Dhrs7b
Tmc6
Tmc8
Eci3
Yod1
Meaf6
Adgb
Tmem62
Slc9a9
Actl6b
Ccn2
Mamstr
Abca8b
Zfp286
Slc35f2
P3h1
AU022252
Slc23a2
AB010352
Tsga10
Lgmn
Arl14
Pgrmc2
Dnajc6
Sae1
Mib2
Shoc2
Bbip1
Atp9a
Klhdc7a
Shc4
Lgr6
Ptch2
C2cd2
Rbpjl
Nr6a1
Slc13a2
Cped1
Sod3
Chd7
Ccpg1os
Ccpg1
Lingo1
Grk3
Rnf220
Iqch
Aagab
Dok5
Slc39a2
Fcor
Cep70
Fbp1
Cd55
Cort
Zbtb25
Zbtb1
Asap1
Dsn1
Plaat3
Ncdn
AU040320
Gab2
Ly96
Yars2
Rtkn
Neurog3
Pcgf6
Rap2a
Clmn
Suz12
Ppp1ccb
Ppp1cc
Tmem104
Nat9
Mfap4
Klhl1
Syncrip
Dym
Stk32a
Tab1
Dctn4
Hinfp
Stoml2
Ssh1
Slc25a22
Cmas
Sco2
Bach1
Rab4a
Ccdc194
Smad6
Arhgap19
Rpp38
Rassf8
Tvp23a
Zdhhc6
Vti1a
G2e3
Tbc1d9
Fam107a
Mrps15
Sh3gl3
Mapkapk5
Stmn1
Gsx1
Slc30a10
Zfp36l3
Ralb
Pcgf1
Slc25a1
Tlcd2
Bmf
H3f3a
Zfpl1
Cdca5
Gcnt4
Prune1
Mtg1
Ints14
Cbs
Fam178b
Lrmp
Zfp964
Klhdc8b
Ccdc71
Nup153
Pik3r3
Ppfia1
Nrp1
Golm2
Exosc6
Snx17
Eif2b4
Tmem67
Fnta
Daxx
Zfp65
Scd1
1700008O03Rik
B3gnt4
Nup85
Patj
Spata24
Mdm1
Trmt112
Prdx5
Hsd17b2
Ndrg1
Tgfbrap1
AI597479
Gab1
4930453N24Rik
Rcsd1
Slc25a44
Icam1
Irgm1
Rheb
Dcaf12l1
Cd63
Fcho2
Reep5
Coil
Ksr2
Rab37
Lrrc34
Med12
Lrriq4
Gpr83
Trim7
Kank2
Cluh
6430571L13Rik
Prss38
Mta2
Ints13
Fgfr1op2
Usp10
Usp48
Otulin
Rabggta
Snx15
Appl2
Hps3
Mob1a
Thbs2
Dyrk4
Ska3
Mrpl57
Cyb5b
Prkag2
Gja4
Myadml2
Nav2
Sprr2a2
Sprr2a1
Mtor
Lhx1
Upp1
Plcxd1
Zhx1
Tpd52
Cbll1
H1f2
Olfr972
Grid2ip
Rgl1
Arpc5
Donson
Lbr
Pdp2
Pdlim5
Tor1aip2
Mrpl49
Fau
Trip10
Csad
Slc16a9
Col26a1
Cfl1
Shf
Fitm2
Actr6
Syne1
Notch2
Uchl5
Ro60
Tsen15
Mtmr10
Impact
Hcfc2
Gne
Tbx1
Dennd2c
Rln1
Pum3
Kcnc2
Hacd3
Nmnat3
Rhbdl3
Defb11
Snx10
Utp14b
Acsl3
Zp3
Cst3
Zfp787
Hmx3
Ywhag
Pygo2
Acot11
Epb41l4a
Wipf2
Mreg
2510009E07Rik
Rrbp1
Hgh1
Letmd1
Hipk2
Gmcl1
Cavin3
Usp36
Chrm4
Garnl3
Dipk2a
Sema4b
Serpina3i
Slc25a2
Cfap97
Krt81
Drg2
Ube2d1
Smarce1
Dpf3
Fbxl7
Spred1
Sapcd1
Sh2d4b
Pik3cd
Mnx1
Ripply1
Ropn1l
4930404N11Rik
Jakmip1
Rhpn2
Rnf114
Lrrn2
Slc30a9
Tmem200c
Map2k6
Setdb2
Gm45935
Cab39l
Rnf122
Sowahb
Rest
Sf3a1
Ccdc157
Arhgap32
Txn2
Krtap10-10
Exoc6b
Castor1
Bcas3
Sprr2a3
Insr
Timm9
2700049A03Rik
Itm2b
Flywch1
Znrf1
Ubr5
Actr10
Tmem101
Gabpb2
Zkscan5
Rnaseh2b
Sh3bp2
Ptp4a2
Nae1
Car7
Adamts7
Prom1
Zfhx3
Fam81a
Rmdn1
Dpep3
Slc9a3r1
Mtap
Lrrc8e
Ptpra
Tor4a
Rprd2
Kcnip4
Trim68
Upp2
Wsb1
Zscan18
Myo10
Kdelr1
Apcdd1
Slc12a4
Adnp2
Tgfbr1
Oas1g
Elf4
Arfgef1
Syngr2
Muc3
Tsc22d3
Nrros
Smad4
Gadd45g
Wipi2
Tmem161a
Ppia
Hdac1
Hspb1
Msra
Trmt9b
Hcn4
Slc39a8
Dlat
Srgap1
Apc
Tdp2
Acot13
Gls
Gjc1
Unk
Pcdh11x
Glul
Fam171a1
Lrig3
Ahdc1
Vps26b
Ncapd3
Shroom3
Slco4c1
Bcl7c
BC031181
Midn
Cdc45
Hnrnpr
Plpp1
Klf6
Nectin2
Scrn3
Cir1
Glra3
Cfhr3
Kcnq3
Fubp3
Rnf182
Dync1li2
Sfxn2
Arl3
Chst15
Plin3
Trmt61a
Gatad2a
Ttc28
Srpr
Foxred1
Acvr1b
Bag3
Pde3a
Coro2a
Zfp64
Gm2696
Pglyrp1
Trim36
Ppp1r1a
Esyt2
1700001P01Rik
Trpc6
Lrrtm3
Ccdc60
Zyg11a
Slc46a3
Tlx2
Mios
Ttc21b
Tle6
Usp5
Mcrs1
Sbno2
Tomm40l
Apoa2
C1ql1
Atp2c2
Zfp169
Rundc3a
Pih1d2
Nkapd1
Rif1
Slc15a1
Plcb4
Stxbp5l
Mrps35
Gm14393
Nudt1
Msc
Kifc3
Cdk5rap3
Spp1
Lpl
Baz1b
Tinagl1
Bphl
Rell2
Il6ra
Cachd1
Sms
Megf8
Stc2
Hpgd
Tcl1
Apof
Hspa14
Cdnf
Hectd1
Fam169a
Pigw
Myo19
Kcng3
Atad3a
Aqp3
Adgra2
Tanc1
Anapc10
Abce1
Adgrg1
Amacr
Srd5a3
Plekhf2
Lrrc8d
Zfp24
Map2k1
Smyd2
Klf1
Trim25
Ago3
Cdc42ep2
Anxa11
Adcy5
Msh6
Adam12
Plcb3
Slc25a13
Pdpr
Ndufa6
Camk2n2
Clps
Sf3b3
Cog4
Rpl39l
Ubfd1
Ears2
Irx4
Ints9
Hmbox1
Dennd1a
Steap3
Mall
Iqcc
Wsb2
Phax
Aldh7a1
Sptb
Cltc
Tbc1d1
Gimap9
Fam161a
Tead2
Socs2
Fam219b
Vamp4
Syndig1
Smarca1
Prmt9
Fn1
Atp1a1
Ube3a
Cd82
Mpc1
Atp6v1c2
Srsf5
Rnpep
Parp6
Zfp62
Fgfrl1
Mpzl1
Pde8a
Usp37
Cnot9
Sntg1
Slc25a53
Ypel1
Proser1
Nhlrc3
Ccdc142
Dbnl
Ksr1
Map7
3110082I17Rik
Neil2
Zdbf2
Nfix
Wscd2
Actn2
Cdsn
H2bc1
H2ac1
Ube2c
Gtf3c3
Tyw3
Cryz
Flna
Pabpc1
B3gnt2
T2
Dnm3
Jup
Ttc22
Ttc9b
Zscan10
Klhl22
Adgrg5
Rnf144b
Aox1
Smpd5
1700125H20Rik
Tyw5
Maip1
Rln3
Tprn
Grk6
Asxl1
Tmem63b
Mrpl14
Rhbdf1
Ube2t
Mfsd11
Srsf2
C1galt1c1
Actl6a
Pxdc1
Pdha1
Gtf3c4
Gemin5
Ndrg4
Crh
Spryd4
Spdye4c
Spag4
Mcf2l
Fut10
Ghitm
Cyrib
Pdia3
Catsper2
Uba6
Abcb8
Pura
Dhrs3
Pgm1
Spsb4
Got1
Pnrc1
Ccnd3
Poldip3
S1pr1
Tmem70
Lcorl
Usp9x
H3c6
Arfip1
Tsc1
Them6
Eno1
AI413582
Tdh
Ptges2
Pts
Sulf1
Cit
Gm19668
Ints5
Cdc14a
Smad7
Ppp1r13l
Cd3eap
B4galt5
Retreg1
Klhdc4
Adamtsl4
Sema6a
Unc5b
D10Wsu102e
Abl2
Lamb1
Imp4
Ccdc115
H3c13
H2bc18
Wnt8a
Zfp397
Zbtb7b
Porcn
Mrpl44
Tasor
Neil1
Ddb2
Abhd18
Atp9b
Adgre5
Gm18905
Nsrp1
Csrp2
Mkrn2
Socs5
Fosl1
Bcl10
Immp2l
Camk1d
Mon2
Mapk9
Retsat
Elmod3
Tada1
Nid2
Slc12a5
Rps3a1
Slc66a2
Gtf2a2
Tmem106c
Ntsr1
Apom
Rtn4rl1
Tsc22d4
Tubgcp6
Dmgdh
Bhmt2
Med25
Cdk16
Cbr3
Rasgef1a
Gm4925
Arl1
Adam11
Cenpu
Gid4
Clybl
Fancd2
Emc3
Dnajc10
Ptges3
Gpbp1
Dmc1
Efcab2
Sgo2b
Nmt2
Slfn9
Nupr1
Rasgrp2
Kdm4a
Ccdc9b
Pld2
Wnt16
Casc3
Trerf1
Zeb2
Sec23b
Bnc2
B3gnt7
Tfeb
Hnrnpll
Gm3448
Gm3417
Gm3435
Mapk8
Ppat
Paics
Nat14
Celsr3
E030030I06Rik
Fignl1
Pawr
Htatsf1
Aldoa
Kmt2c
Sdr39u1
Rbm41
Pyurf
Vwa2
Acbd5
Cdc42ep4
Samd12
Vps18
Slc6a16
Cpsf4l
Mxi1
Camkv
Snrnp35
Tiparp
Il33
Lrrc8b
Mob1b
Cpxm1
Arhgap33
Rbm14
Gm21992
Zfp957
B4galt2
Reep2
Gabbr1
Polg
Spock3
Krt42
Ptpn14
Snrnp70
Ctif
Mnt
Hsp90ab1
Sp5
Nqo2