ChIP-Atlas: Target genes

Potential target genes for Zic3

Query protein: Zic3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX15057958 | mESCs, differentiated
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Zic3's Target genes

◢ Zic3: Average

◢ SRX147572: ES cells

◢ SRX6879008: ES cells

◢ SRX7546911: ES cells

◢ SRX7546912: ES cells

◢ SRX7546913: ES cells

◢ SRX7546914: ES cells

◢ SRX823607: ES cells

◢ SRX12142046: mESCs, differentiated

◢ SRX12142051: mESCs, differentiated

◢ SRX12142055: mESCs, differentiated

◢ SRX15057955: mESCs, differentiated

◣ SRX15057958: mESCs, differentiated

◢ SRX15057960: mESCs, differentiated

◢ SRX9896071: mESCs, differentiated

◢ Zic3: STRING

Cd38
Alg14
Timp4
Atrn
Gatad2a
Smc6
Gen1
Eno1
Pabpc1
Sbk1
Gid4
Ufsp1
Asxl1
Zcrb1
Pphln1
Letmd1
Enpp4
Man2a2
Slc6a16
Grb2
Mkx
Ints9
Hmbox1
Znrf1
Irgm1
Coq2
Slc37a3
Donson
Rbm47
Ywhae
Wsb2
Wipi2
Lama1
Tbc1d5
Ubtf
Pacsin2
Pitx3
Itm2b
Snrnp70
Pcif1
Prdm4
Trabd
Frzb
Apbb2
Slc12a4
Cul5
Lefty1
Ptprz1
Vezt
Fgd6
Fbxo5
Stmn1
Arfgef1
Zfp410
Adnp2
Zfp964
Ppp2ca
Phf10
Kdm2b
Spata24
Mmp25
Colec12
Apc
Marchf7
Exoc6b
Rnf114
Inafm2
Pou5f1
E030030I06Rik
Nudt1
Flywch1
Tmco4
Ptpra
Zfp36
2610528J11Rik
Tmed7
Eif1a
Mylpf
Tbc1d10b
Mterf1b
H2-DMa
Brd2
Zfp9
Pdcd2
Dhx32
Syne1
Ddx20
Rpp14
Htd2
Tagln3
Sfxn2
Arl3
Coil
Fstl1
Terf2
Trip12
Fbxo36
Ccdc60
Golm2
Chd1
Pnrc1
Arl2
Sema6a
Klf5
Pxdc1
Shoc2
Bbip1
G2e3
Trim33
Lrrc8d
Faim
Enah
Abl2
Cep70
Mios
Polg2
Kif17
Ndrg1
Mbd3
Mterf1a
Pvr
Tent5c
Notch2
Il17d
Cds1
Glul
Mreg
Rnf8
Nkiras2
Dynll2
Mapre2
Zdhhc6
Vti1a
B3gnt7
Sptb
R3hdm2
Lrrn4
Gdpgp1
Cib1
Plcxd1
Slc39a4
Mapk14
Pald1
Tmem131l
Ednrb
Phlpp2
Arap2
Ncdn
AU040320
H1f2
Smad4
Fcor
Nbea
Agfg1
Ttc21b
Tmem62
Sh3rf1
Ddah2
Arid3c
Prelid3a
Zfand6
Arhgap32
Coro2a
Asap2
Ksr2
Chrac1
Scd1
Snn
H3f3a
Hnrnpa2b1
Cbx3
Usp36
Pum1
Cdkn2aip
Usp37
Cnot9
Pou2f1
T2
Lifr
Nsrp1
Mapk4
Cerkl
Fbxl7
Trim25
Atxn3
Pum3
Qpct
Mpped2
Pdia3
Catsper2
Ralb
Pelp1
Hcfc2
Gpsm2
Tmem63b
Mrpl14
Ccdc30
Wdr59
Tfeb
Parp6
Tgfbr1
Phc2
Tapbp
Rmi1
Hnrnpk
C1ql1
Gngt2
Abi3
Slco5a1
Ptch2
Actn1
Smarca1
Zfp341
Pdpr
Serpini1
Pdcd10
Brms1l
Myo10
Prmt9
Hnrnpll
Cpsf4l
Zfp868
Scrt2
Slc12a2
Zfp62
App
Csnk2a1
Usp13
Tbl1xr1
Hoxc13
Ppp3cb
Neil2
Slc4a2
Efemp1
Usp32
2300009A05Rik
Ptprg
Fbxo11
Rbm45
Exd2
Ptk7
Hif3a
Smad7
Prkag1
Rtcb
Ubr5
Tab1
Dmtn
Pdxdc1
Mpv17l
Castor1
Aktip
Ropn1l
Tcf7l2
H2az2
Ppp2r5b
Rnf125
Loxl3
Dok1
Rheb
Ttc9b
Prkar1a
Rab4a
Col5a1
Pde3a
Dgkd
Slc9a3
Ptdss2
Rasgrp2
Mthfd2l
Tmem42
Mrpl49
Fau
Naa16
Zbtb25
Zbtb1
Garre1
Klhdc8b
Ccdc71
Cdkl2
Pms1
Ormdl1
Camk1d
Ncoa1
Klhl1
Kcnj4
Coq8b
Cacng2
Gas2
Fancf
Trim72
Cox5a
Msh6
Fam107a
Col13a1
Slc16a9
Pik3r3
Spint1
Arhgap42
Timm44
Ppat
Paics
Coa4
Tfpi
Dennd1a
Cfap300
Zfp64
Rtkn
Pdp2
Rif1
Tsga10
Wdr61
Prrc2b
Sec22c
Hsdl1
Dnaaf1
Prickle1
4930402H24Rik
Kcnn2
Vdac3
Ap3b2
Bcl7b
Picalm
Chid1
Fads1
Skil
Hdac1
Cd47
Usp10
Kif5c
Zdhhc2
Glra1
Mtfr1l
Fam241b
Srd5a3
Mturn
Tle4
Med12l
Dner
Zfp976
Stk32a
Tmeff1
Obsl1
Inha
Xpo6
Set
Akt2
Mapk8
Neil1
Gsx1
Ptpdc1
Foxd2
Tdrd3
Kcnq3
Fam160b2
Fam227b
Dtwd1
Tpd52
Chn1
Vgll3
Zfp839
Cdhr1
Snx17
Eif2b4
Hinfp
Ccdc194
Proser2
Tor4a
Tanc1
Casc3
Msc
H3c13
H2bc18
Tmc7
Zbtb12
Krba1
Tprn
Nacc1
Tle6
Trmt1
Tcirg1
Smim1
Pcbp2
Slc35f2
Mmp15
Oplah
Ddx60
Nphp3
Trim68
Sdc4
Socs5
Csk
Ust
Rgs12
P3h1
AU022252
Mapk3
Stat5b
Sox7
Hipk2
Tubb5
Dctn4
Lrrc8b
Mink1
Vrk1
Arid4b
Ssh1
Fam136a
Car14
Meaf6
Cd24a
Tmem121b
Malt1
Togaram1
Klhl28
D5Ertd579e
Adam22
Secisbp2l
Fbrsl1
Ptch1
Zyg11a
C2cd2
Cluh
Pygo2
Eif4e
Ccn2
Hmga1b
Hmga1
Kctd9
Cdca2
Jak2
Trip10
Rab37
Hcn1
Rock2
Arhgap24
Phyhipl
Unkl
Dab1
Apoe
Pdha1
Mob1a
Adamts20
Ptpn14
AI661453
1700001C19Rik
Icam1
Pgrmc2
Spg20
Appl2
Dcaf11
Napepld
Mafg
Rragd
B4galt1
Mt1
Epn3
Rnaset2b
Rnaset2a
Ttc14
Bcl10
Fahd2a
Pkm
Galk1
Dgkh
Slc25a22
Pcgf6
Dvl1
Faap20
Nup85
Fnta
Pik3cd
Immp2l
Igf2bp3
Pnkd
Aamp
Ltb4r2
Tbc1d9
Tada1
Irx2
Ost4
Cacng7
Cct2
Parp8
Per3
Slc46a3
Slc30a9
Umad1
Rpa3
Tfg
Nid2
H3c15
H3c14
Cuedc1
Hmgxb4
Ccdc3
Mnx1
B3gnt4
Cand2
Ppp2r3a
Rgl2
Fn1
Chst15
Retreg1
Hectd1
Sec22b
Hivep2
Psd3
Nadk2
Ypel1
B4galt2
Klhl34
Cnn3
Stx11
Phf20
Suz12
Rsph4a
Utp14b
Acsl3
Rab33b
Ppara
AI413582
Clcn4
Hr
Stc2
Ctdsp2
Ift140
Cramp1l
Ntng1
Aff4
Tmem161a
Chrna9
Il18
Bco2
Slc27a2
Zfp977
Sbk2
Atg5
Fgfr2
P2ry1
Ddx3x
Dna2
Poc1b
Galnt4
Scaf11
Mical1
Trim36
Asap1
Csrp2
Prmt8
Slc22a23
Skor1
Slc40a1
Btbd1
Zkscan5
Adam12
Mov10
Tulp4
Erc1
Iqcc
Rufy3
Pdk1
Ptpn3
C1ql3
Esrp2
Gm2237
Slc13a2
Bcl7c
Sntb2
Entpd4b
Entpd4
Mllt1
B3gnt2
Mfap3l
Sf3a1
Ccdc157
Ubtd1
Mms19
Got2
Cxcl11
Zfp787
Cux2
Tmem199
Poldip2
Sugt1
Gja4
Slc25a44
9930012K11Rik
Klc3
Scrt1
BC107364
Kmt2c
Wtap
Gm3739
Rhbdf1
Eml6
Ttc28
Ndufa6
Pus3
Ddx25
Gm3173
Ran
Tpm1
Sowahc
Septin10
Clip4
Ppp1ccb
Ppp1cc
Plekhh1
Srpr
Foxred1
Lypd6b
Septin2
Hdlbp
Tmem175
Gak
Slc14a1
Fam222b
Uqcrq
Cd63
Raph1
Adgra2
Tvp23a
Mettl9
Pias3
Atrnl1
Abca8b
Mnt
Cds2
Cand1
Yars2
Recql4
Lrrc14
Gapvd1
Thsd7b
Trim7
Fam118a
Nefh
Ap1b1
Fgf4
Lrrn2
Ccpg1os
Ccpg1
Ndufab1
Rassf8
Hnrnpu
Dhrs7b
Clasp1
Ipo8
Impdh2
Cass4
Psap
Mob1b
Gna13
Plxna1
Kank2
Cenpb
Fam20b
Trim13
Kcnab3
Rcc2
Rrm2
Tmem189
Sox2
Exosc6
Mfsd11
Srsf2
Baz1b
Herc6
Paip1
Uhrf2
Tob1
Rps23rg1
Slc9a3r1
Ugp2
Ccdc9
Cdk6
Zfp996
Tef
Parp12
Zfp687
Ube3c
Epm2a
Lpgat1
Zfp217
Herpud2
Mllt6
Cmas
Mrps15
Klf4
Tmem229a
Cltc
Steap3
Igfbpl1
Gm10406
Phldb1
Fam90a1b
Apoo
Neurog3
Slc66a2
Dpf3
Gmeb2
Pcbp1
Fzd10
Ccdc6
Extl3
Nfat5
Mrps23
Col27a1
Afap1l2
Fbxo25
Maz
Phlda3
Timm9
2700049A03Rik
Mkrn2
Tdh
Pou3f3
Strn
Col2a1
Myo1e
Ncoa2
Ifitm1
Ptdss1
Mterf3
Spag4
Kcng3
Cdk13
Caps2
Rnf103
Foxo6
2210016F16Rik
Tmem178
Fadd
Foxf1
Reep2
Iqgap2
Atad2b
Rnf11
Nectin2
Fitm2
Smndc1
Magi3
Trmt61a
Trim8
Cnbp
Dpf1
Shox2
Map3k20
Itga1
Eif4g2
Mlf2
Prex1
Pbld2
Hnrnph3
Mpc1
Wdr20
Mamstr
Atp1a1
Mael
Nanog
Tmem168
Klhl22
Tnk2
Numa1
Socs2
Cachd1
Zfp219
Dyrk4
Otulin
Sp4
Krit1
Ankib1
P4hb
Gtf3c4
Ap1g1
Sec31a
Slc45a3
Dis3l
Efs
Msra
Dlc1
Ndfip2
Yod1
Rnaseh2b
Mcam
Ube2d1
Hsf2
Prkab2
Zfp143
Sorl1
Rest
Snap29
Pi4ka
Slc35d1
Nup153
Adamts7
Avl9
Ppp1r13l
Cd3eap
Setdb2
Gm45935
Cab39l
Npcd
Cbx6
Trerf1
Vti1b
Pard6g
Mettl14
Abi2
Bag3
Actr10
Cops3
Synj2
Mboat1
B4galt7
Utp23
Foxp4
Lpar2
Npepps
Cdr2l
Zfhx3
Lgmn
Wscd2
Dennd2c
Ptp4a2
Csnk1g2
Mgat1
Elmod1
Btla
Tesk2
Spred1
Zfp319
Usb1
Fignl1
Ago3
Clic1
Vwa8
Myef2
Plcb4
Kmt5b
Ccnjl
Kcnc2
Brpf1
Prom1
2510009E07Rik
Cnpy1
Sclt1
D3Ertd751e
Gne
Fbxl15
Slc25a24
Xbp1
Kcnip4
B230219D22Rik
Vps51
Ppm1n
Hspb1
Tmem44
Cttn
Iars2
Rnf38
Mib1
Spry2
Gabrb3
Caprin1
Slain2
Nfatc3
Klhl2
Sall4
Tppp
Gosr2
Clasp2
Sf3b3
Cog4
Nr1d2
Gm3285
Marchf8
Dusp10
1700056E22Rik
Washc4
Snx15
Dsn1
Spata13
Bmpr1b
Lsm14b
Btf3l4
Txndc12
Pdzd4
Lrp5
Ggnbp2
Gtf2a2
Arhgap29
Jade3
Vsx1
Jpt1
Wwtr1
Ssr1
Vwa2
Axl
Myo1b
Actn2
Ehmt2
Gcn1
Zfp54
Crocc
Rbpjl
Slco4c1
Morf4l2
Ap1g2
Ahdc1
Hapln4
Cd55
P3h2
Epb41l4b
Degs1
Cep112
Smad6
Vrtn
Rnf138
Slc5a6
Atraid
Fam102a
Ncoa7
Stx8
Cfap52
Agpat5
Tbc1d4
Phf12
Srsf6
Calm2
Pacsin3
Cnot2
Stk32b
Fbxl19
Zfp975
Mxd3
Vav2
Abr
Shprh
Tmem170b
Gm10318
Frg2f1
Foxj3
Slc39a7
Rxrb
Prnp
Prn
Grm2
Nup210
Utp15
Ankra2
BC031181
Hsp90ab1
Syde2
Poll
Dpcd
Hoxd3
Mfsd13b
Cdr2
Tlr2
Wipf1
Akap11
Shroom3
Bmper
Mdm1
Fermt2
Ppm1a
Mcrs1
Afg1l
Plekhg5
Tmem198
Chpf
Nrros
Ccdc134
Hjurp
A730008H23Rik
Cmtm3
Lhx1
Ryr2
Cep63
Anapc13
Slc17a5
Chst5
Sav1
Kansl1l
Unc5b
Myrip
H1f4
Pcdh1
Wiz
Fbxo30
Cyp4x1
Nmnat3
Klf13
Stra6l
Khnyn
Cbln3
Gm9736
Zhx1