ChIP-Atlas: Target genes

Potential target genes for Zic3

Query protein: Zic3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX7546913 | ES cells
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Zic3's Target genes

◢ Zic3: Average

◢ SRX147572: ES cells

◢ SRX6879008: ES cells

◢ SRX7546911: ES cells

◢ SRX7546912: ES cells

◣ SRX7546913: ES cells

◢ SRX7546914: ES cells

◢ SRX823607: ES cells

◢ SRX12142046: mESCs, differentiated

◢ SRX12142051: mESCs, differentiated

◢ SRX12142055: mESCs, differentiated

◢ SRX15057955: mESCs, differentiated

◢ SRX15057958: mESCs, differentiated

◢ SRX15057960: mESCs, differentiated

◢ SRX9896071: mESCs, differentiated

◢ Zic3: STRING

Alg14
Znrf1
Letmd1
Ncdn
AU040320
Slc15a1
Pabpc1
Vezt
Fgd6
Gatad2a
Slc6a16
Prdm4
Atrn
Wsb2
Man2a2
Gid4
Lama1
Cd38
Asxl1
Kif17
Rheb
Eno1
Colec12
Nphp3
Wdr59
Zcrb1
Pphln1
Spata24
Atxn3
Zfp964
Mbd3
Ywhae
Trim72
Arfgef1
Coro2a
Exoc6b
Rif1
H3f3a
D5Ertd579e
Chd1
Tmed7
Eif1a
Ccdc30
Klf5
Apbb2
Terf2
Arl2
Timp4
Prkag1
Mllt1
Rnf114
Mllt6
Smc6
Gen1
Lrrc8b
Pacsin2
Tbc1d5
Snx15
Ufsp1
Tmem62
Tulp4
Sfxn2
Arl3
Tagln3
Myo10
Rnf125
Dynll2
Atg5
Mios
Rpp14
Htd2
Slc12a4
Adgra2
Rybp
Rassf8
B3gnt7
Apc
Pum3
Dnttip2
Cep63
Anapc13
Flywch1
Pvr
Slc37a3
Prnp
Prn
Notch2
Donson
Togaram1
Klhl28
Qpct
Slc9a3r1
Spag4
Mapk14
Slc26a8
Ptch2
Mreg
Mrps15
Cenpb
Zfp410
Pcgf6
Cluh
Polg2
B3gnt4
Gne
Parp12
Dhx32
Zdhhc6
Vti1a
Umad1
Rpa3
Ptprz1
App
Usp5
Pcgf1
Tfeb
Ccn2
Ubr5
R3hdm2
Nefh
Ap1b1
Tmco4
Stmn1
Ptpra
Cep70
Ddx20
Grb2
Dcaf11
Enpp4
Prkar1a
Chrac1
Nadsyn1
Dhcr7
Cds1
Pdcd2
Cpsf4l
Sptb
Cerkl
Vrk1
Tprn
Ints9
Hmbox1
Ddah2
Ift140
Cramp1l
Fahd2a
H2az2
Ralb
Cmas
Zscan10
Abl2
Rbm47
Fbxo5
Ndrg1
Tmem131l
Pdpk1
Ppp1ccb
Ppp1cc
Cd300lg
Dpf3
Smad6
Cfl1
Slc35f2
Pcif1
Lrrn2
Aldh5a1
H1f2
Ppp2r3a
Usp37
Cnot9
Gdap1
Chid1
Mrpl49
Fau
Adnp2
Cecr2
Col26a1
Rnf122
Cuedc1
P3h1
AU022252
Med12l
Fam136a
Dgkd
Cbll1
Castor1
Zfand6
Slc17a5
Tbc1d9
Hspb1
AI413582
Picalm
Coq2
Faim
Rab4a
Slc4a2
Tdrd3
Etv6
Mterf1a
Ccdc9
Snn
Tvp23a
Ppp2ca
Mkrn2
Irgm1
Plcxd1
Yod1
Zfp9
Sclt1
D3Ertd751e
Mael
Fcor
Arhgap32
Hdac1
Ust
Grid2ip
Tmeff1
Baz1b
Gsx1
Pygo2
Phyhipl
Tmtc4
Prelid3a
Cdkl2
Lifr
Wbp11
BC049715
Pdlim5
Mapk4
Timm44
Hipk2
Trabd
Atp2c2
Pnkd
Aamp
Parp6
Serpini1
Pdcd10
Slc31a1
Fkbp15
Cdkn2aip
Ttc28
Foxd2
Gpbp1
Dnmt3a
Zhx1
Fbrsl1
Asap2
Zbtb25
Zbtb1
Mterf1b
Ido1
Slco5a1
Foxf1
Cul5
Cd47
Zdhhc2
Glra3
Klhdc8b
Ccdc71
Kcnj4
Cds2
Pdp2
Dhrs7b
Shoc2
Bbip1
Steap3
Fam161a
Axin1
Klf1
Racgap1
Mnx1
Slc12a2
G2e3
Fbxo34
Casc3
Ghitm
Hsdl1
Dnaaf1
Mturn
Rabggta
Ndrg4
Sh3rf1
Cdc45
Ptpn14
Arap2
Rtcb
Sbk1
Sbk2
Plekha7
Rnf220
Scaf11
Caprin1
Msc
Akt2
Coil
Poc1b
Atp1a1
Galnt4
Spred1
Reep5
Mrps35
Unc5b
Rap2a
Tcea3
Fubp3
Wnt3a
Mib2
Exd2
Fam118a
Gprc5a
Slc16a9
Pxdc1
Marchf7
Smad4
Coa4
Uhrf2
Cdhr1
Bcl10
Syne2
Pik3r3
Pdrg1
Ywhag
Slc25a22
Gja4
Zfp868
Elovl2
Il17rd
Cdc16
Arid3c
B3gnt2
Dis3l
Garre1
C1ql1
Asap1
Apoe
Chn1
Pdia3
Catsper2
Hey1
Tsga10
Rest
Gjc1
Ssh1
Timm9
2700049A03Rik
Btf3l4
Smarce1
Ginm1
Frg2f1
Foxj3
Fam227b
Dtwd1
Pigk
Slc22a17
Mapkapk5
Ntng1
Xpo6
E030030I06Rik
Recql4
Lrrc14
Iqch
Aagab
Unkl
Ahdc1
Vdac3
Ptdss1
Mterf3
Dus2
Ddx28
Galnt16
Nkiras2
Pitx3
Ccdc60
Ephb3
Tmem42
Nfix
Prrc2b
Dmap1
Rnf103
Dyrk4
Dvl1
Hcfc2
Usp36
Slc25a1
Zfp36
Pcbp2
Akip1
Hmgxb4
Zkscan17
Klhl2
Zfp976
Tbl1xr1
Clasp2
Fignl1
Poll
Dpcd
Zfp217
Hpgd
Mpzl1
BC031181
Tmem200c
Limk1
Tiparp
Tmc6
Itm2b
Arhgap42
Lpgat1
Ninj1
Ccdc134
Slc13a2
Cacng2
Ube2d1
Oplah
Tpd52
Slc27a2
Crocc
Actr10
Cst3
Lgmn
Trmt1l
Swt1
Atad3a
Nup85
Msra
Mt1
Arhgap19
Trim7
Klf11
B4galt2
Setdb2
Gm45935
Cab39l
Fads1
Ncoa1
Myadml2
Prom1
Slc7a6os
Prmt7
Shroom3
Coq8b
Ubfd1
Ears2
T2
Tent5c
Hif3a
Hcn4
Ap1g2
2510009E07Rik
Wipi2
Msh6
Csde1
Wiz
Mtfr1l
2210016F16Rik
Fbxl15
Socs2
Pnrc1
Spast
Fam102a
Fam178b
Pde3a
Lrrn4
Fndc3b
Gna13
Utp15
Ankra2
Cand1
Ccpg1os
Ccpg1
2700081O15Rik
Tmem170b
Snx17
Eif2b4
Srd5a3
Col5a1
Cdk13
Zfp64
Slc14a1
Naa16
Stk38
Klhl13
Wnt16
Sms
Ptges2
Kcnma1
Rad51ap1
D6Wsu163e
Suclg2
Ppp2r5b
Rtn4rl1
Gpcpd1
Abcc1
En2
Tmem199
Poldip2
Plxna1
Igfbpl1
Iqgap2
Tcl1
Zfp663
Mnt
Trmt61a
Midn
Hnrnpa2b1
Cbx3
Hinfp
Lpar2
Camk2n1
Zscan18
Tubgcp6
Flnc
Adamts7
Nfatc3
Tab1
Abca8b
Dok5
Pdha1
Unk
Mettl9
Sh3gl3
Kcnt1
Sntg1
Afg1l
Egln1
Tada3
Arpc4
Meaf6
Ppfia1
Pou3f3
Cd55
Aktip
Suz12
Ttc9b
H3c15
H3c14
Hes3
Ppp2cb
Golm2
Enah
Trim8
Pgrmc2
Mfap3l
Rpp38
Pkm
Pus3
Ddx25
Slc39a4
Nyap1
Cct2
Ube2v2
Pex5
Usp13
Mafg
Bcap31
Abcd1
Chd7
Pex11g
Mib1
Map2k5
Fnta
Itga9
Adam12
Stx11
Col27a1
Rpp40
Gpsm2
Ppia
Tigd5
Eef1d
Wscd2
Nrros
Klc3
Cdr2l
Spata7
Fosl1
Cfap300
Plcb4
Srpr
Foxred1
Brms1l
Smad7
Trmt9b
Denr
Per3
Hectd1
Ctif
Uhrf1bp1
Mier2
Tanc1
Phlpp2
Ptch1
Vgll3
Cers5
Foxp1
Smim1
Ssr1
Plekha5
Bloc1s5
Tasor
Tor4a
Dsn1
Clk1
Herpud2
Sdhaf4
Pawr
Tcim
Rnf8
Maz
Utp23
Rasa2
Ube3c
Ggnbp2
Ccser1
Edf1
Zfp62
Ppara
Ppfibp1
Myo5c
Jak2
Car2
Smarca1
Tmem104
Nat9
Krtap10-10
Tinagl1
Mkx
Phf20
Rrbp1
Mon2
Dennd2c
Exosc6
Slc39a3
H3c13
H2bc18
Cbs
Dlat
Glra1
Mamstr
Pld6
Gmeb2
Cux2
Esrrb
Ryr2
Trim36
Hps3
Zfp839
Tlcd2
Kcp
Cep112
Rab18
Rsbn1
Kcnq3
Cand2
Pdpr
Pxk
Steap4
Camk1d
Txlng
Anp32a
Pdxdc1
Mpv17l
Nectin2
Tmem198
Chpf
Ska3
Mrpl57
Dpp6
Phc2
Crh
Garnl3
Arid4b
Zfhx3
Tra2a
Got1
Pou2f1
Tsc22d3
Ube2c
Prmt8
Leprotl1
Immp2l
Gtf3c4
Hmx3
Npepps
Scoc
Mat2a
Plin3
Ndufa6
Kmt2c
Zxdc
Ubtf
Gabrb3
Spry4
N4bp1
Lrrc8d
Cox5a
Ccdc194
Accs
Foxp2
Dnajc6
Zfp512b
Slc25a44
Zfp598
Prmt9
Slc66a2
Fgfrl1
Prune1
Vps8
Yrdc
1110065P20Rik
Csnk1g2
Nlgn2
Rnf216
Mfsd13b
Cdr2
Tmem256
Fmnl2
Mthfd2l
Bcl7b
Bdkrb2
Tafa3
Sugt1
Rhbdf1
Cit
Csnk2a2
Fbxl7
Dmtn
Timp2
Krit1
Ankib1
Prkag2
Zfp24
Ckap2
Ovol2
Gclm
Pald1
Zfp687
Pdp1
B230219D22Rik
Slc30a9
Csrp2
Csnk2a1
Mef2d
4930453N24Rik
Ppfibp2
Negr1
Trim25
Fbp1
Camta2
Tyw3
Cryz
Pmp22
Napepld
Tmsb10
Tmem106b
Zyg11a
Dnajc10
Tdh
Rnps1
Letm1
Nnt
Cd63
Ubtd1
Mms19
6430571L13Rik
Gpn3
Fam216a
Cnn3
Cops3
Dnajc5
Tgfbrap1
AI597479
Cdh24
Rbm38
Glul
Kdm2b
Ttc21b
Snap29
Pi4ka
Fam219b
Ctbp1
Nemp1
Klhl1
Spint1
Gcnt4
Apcdd1
Egfl7
Cbln1
Dusp15
Mettl14
Mink1
Gngt2
Abi3
Tfg
Mapkapk2
Grk3
Dolk
Cdh7
Efr3b
4930402H24Rik
Dctn4
Slco4c1
Erc1
Brwd1
Tdp2
Acot13
Tmem189
Cfap97
Cuedc2
Amd2
Amd1
Irx2
Bcl11a
Rmi1
Hnrnpk
Wdr61
Xbp1
Tubb5
Sec24d
Erbin
Gpr27
Lrrc24
Cfap20dc
Setx
Sco2
Rufy3
St7
Plaat3
Epb41l4b
Mdm1
Nat14
Prkab1
Inafm2
Neil1
Rgl1
Arpc5
Six5
Pcbp1
Lonrf1
Pdxp
Cnnm4
Tcf12
Rimkla
Nmnat3
C77080
Nt5c3
Fus
Tmem44
Lrrc8c
Alg10b
Osgin2
Rcc2
Cracdl
Islr2
Lrrc8e
Adcy9
Slc30a3
Polr1d
Lnx2
Rnf34
Vash1
Cdc42ep2
Prkg1
Tapbp
Kank2
Fyn
Iars2
Hacd3
Ints13
Fgfr1op2
Abcb4
Vars
D17H6S56E-5
Syndig1
Fxr2
Acbd5
Set
Gab1
Nadk2
Gls
Tmx3
Kpnb1
H2-DMa
Brd2
Slc22a23
Mgat1
Mindy2
Hcn1
Acp6
Foxe1
Adam22
Pm20d2
Snrnp35
Atl2
Pou5f1
Mylpf
Tbc1d10b
Kcng3
Pusl1
Acap3
Dicer1
Mmp15
Avl9
Ppp2r5a
Rap1b
Homer3
Kcnh2
Zfyve9
Zfp532
Katnal1
Stard6
4930503L19Rik
Glcci1
Gpank1
Csnk2b
Kin
Atp5c1
Actl6b
Zfp977
Cnbp
Lcor
Slc26a2
Srcin1
Tomm20
Tpm1
Fcho2
Ppp1r8
Nudt8
Cdk6
Ece1
Fam81a
Strip1
Spata2l
Kpna1
Ubqln1
Slit3
Ost4
Clasp1
Map3k20
Wipf1
Krba1
Zyg11b
Fhod1
Ptpre
Ptpn9
Sash1
Slc9a5
Igsf9
Trim28
Ttc13
Arv1
Trip12
Fbxo36
Tle4
Tmem229a
Phactr2
Lrig3
Tamm41
Akirin2
Agfg1
Lhx1
Gdpgp1
Cib1
Ddx3x
Grap2
Agpat5
Gm27021
Emc8
Cox4i1
Trp53bp1
Ppp1r36
Fam171a1
Dusp10
1700056E22Rik
Phax
Aldh7a1
Megf8
Nrep
Ate1
Banp
Psd3
Tbc1d1
Dlk2
Mpp5
Marchf1
Kl
Zdhhc24
Actn3
Usp10
Loxl3
Dok1
Sap18b
Sap18
Klhl23
Dym
Mapk6
Pex5l
Sec22b
Nid2
Hmgb3