ChIP-Atlas: Target genes

Potential target genes for Zic3

Query protein: Zic3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX15057955 | mESCs, differentiated
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Zic3's Target genes

◢ Zic3: Average

◢ SRX147572: ES cells

◢ SRX6879008: ES cells

◢ SRX7546911: ES cells

◢ SRX7546912: ES cells

◢ SRX7546913: ES cells

◢ SRX7546914: ES cells

◢ SRX823607: ES cells

◢ SRX12142046: mESCs, differentiated

◢ SRX12142051: mESCs, differentiated

◢ SRX12142055: mESCs, differentiated

◣ SRX15057955: mESCs, differentiated

◢ SRX15057958: mESCs, differentiated

◢ SRX15057960: mESCs, differentiated

◢ SRX9896071: mESCs, differentiated

◢ Zic3: STRING

Alg14
Cd38
Timp4
Ufsp1
Asxl1
Atrn
Smc6
Gen1
Itm2b
Pabpc1
Pitx3
Letmd1
Gatad2a
Eno1
Gid4
Slc6a16
Mkx
Rbm47
Man2a2
Ptprz1
Mylpf
Tbc1d10b
H2-DMa
Brd2
Ints9
Hmbox1
Enpp4
Sbk1
Adnp2
Pou5f1
Marchf7
Donson
Znrf1
Ubtf
Wsb2
Zfp964
Apc
Zcrb1
Pphln1
Ywhae
Pacsin2
Mmp25
Arfgef1
Irgm1
Sfxn2
Arl3
Pcif1
Tmco4
Fbxo5
Slc12a4
Lefty1
Apbb2
Asap2
Prdm4
Frzb
Lrrn4
Cul5
E030030I06Rik
Trip12
Fbxo36
Tmed7
Eif1a
Snrnp70
B3gnt7
Grb2
Trabd
Rnf125
Wipi2
Tbc1d5
Mapre2
Colec12
Coq2
Notch2
Cerkl
Vezt
Fgd6
R3hdm2
Spata24
Tmem131l
Ppp2ca
Lifr
Hnrnpa2b1
Cbx3
Stmn1
Glul
Slc37a3
Ptpra
Hcfc2
Golm2
Mpped2
Zfp410
Zfp9
Arap2
Pdcd2
T2
Ddx20
H1f2
Tagln3
Sh3rf1
Plcxd1
Slc9a3
Kdm2b
Sptb
Abl2
Pxdc1
Rpp14
Htd2
Cep70
Ptk7
Prelid3a
Rif1
Rnf114
Arhgap42
Brms1l
Ccdc30
Cds1
Mbd3
Zdhhc6
Vti1a
Zfp341
Zfp36
Smad7
Ndrg1
Hdac1
Ccdc60
App
Lrrc8d
Phf10
Tent5c
Ptch2
Mib2
Chrac1
Polg2
Agfg1
Sema6a
Pik3r3
Lama1
Kif17
Terf2
Rmi1
Hnrnpk
Ropn1l
Smad4
Tanc1
Mreg
AI413582
H3f3a
Slc39a4
Il17d
Wdr59
Mapk4
Hif3a
Ubr5
Usp13
Chd1
Prkag1
Pou2f1
Enah
Nudt1
Qpct
Aff4
Stat5b
Zfp62
Coil
Mterf1b
Wdr61
Pdia3
Catsper2
Obsl1
Inha
Fam241b
Trim72
Arhgap32
Tsga10
C1ql1
Tmc7
Pum3
P4hb
Slc16a9
Zdhhc2
Klf5
Myo10
Casc3
Phlpp2
Trim25
Zfp868
Fcor
Slco5a1
Klhl1
Ddah2
Tfeb
Foxd2
Rbm45
Tmem63b
Mrpl14
Prmt9
2610528J11Rik
Ncdn
AU040320
G2e3
Scd1
Rnf8
Fbxl7
Rrm2
Exoc6b
Pgrmc2
Inafm2
Skil
Loxl3
Dok1
Hnrnpll
Skor1
Unkl
Hoxc13
Mapk8
Mios
Fam227b
Dtwd1
Msc
Ap3b2
Dynll2
P3h1
AU022252
Pelp1
Zfp64
Flywch1
Dmtn
Fstl1
Pdxdc1
Mpv17l
Bcl7b
Cfap300
Atxn3
Reep2
Kif5c
Ccdc6
Mapk14
Nbea
Tle4
Chid1
Garre1
Cdkl2
H2az2
Cdhr1
Ccdc3
Cd47
Gdpgp1
Cib1
Aktip
Zbtb12
Mterf1a
Kcnc2
Pvr
Gsx1
Pum1
Syne1
Mthfd2l
Efemp1
Tapbp
Trim33
BC107364
Parp6
H3c13
H2bc18
Fut4
Ppp2r5b
Tpd52
Sugt1
Slc12a2
Ccn2
Cdkn2aip
Arid4b
Eml6
Trim7
Smarca1
Med12l
Nkiras2
Pnrc1
Pald1
Prrc2b
Kcnj4
Pdpr
Ksr2
Hmga1b
Hmga1
Pde3a
Stk32a
Ppp3cb
Faim
Arid3c
Slc4a2
Hivep2
Naa16
Got2
Zfp687
Mink1
Ddx60
Zfp787
9930012K11Rik
Snx17
Eif2b4
Tcf7l2
Camk1d
Set
Nsrp1
Rab4a
Fads1
Mt1
Ncoa1
Ypel1
Ccdc9
Rragd
Tbl1xr1
P2ry1
Shoc2
Bbip1
Cdk6
Picalm
Zbtb25
Zbtb1
Stx11
Msh6
Clasp1
Fbxo11
Klhdc8b
Ccdc71
Mmp15
Vdac3
Ednrb
Il18
Bco2
Cpsf4l
Ptprg
Tmem62
Shroom3
Foxf1
Col5a1
Gpsm2
Mnx1
Mcam
Tada1
Magi3
Tmeff1
Tgfbr1
Slc38a2
Ppp1r36
Vrk1
Lrrn2
Tulp4
Fbrsl1
4930402H24Rik
Prmt8
Gas2
Fancf
Gngt2
Abi3
Usp32
Hipk2
Trerf1
Serpini1
Pdcd10
Arl2
Dennd1a
Ttc21b
Coq8b
Dhx32
Immp2l
Exd2
Dgkd
Slc30a9
Mgat1
H3c15
H3c14
Parp8
Col13a1
Mllt6
Ust
Utp14b
Acsl3
Hapln4
Vrtn
Cd24a
Cd63
Chn1
Maz
Snn
Usp37
Cnot9
Ube2d1
Tab1
Sec22c
Meaf6
Pygo2
Kcnn2
Hmgxb4
Hr
Dennd2c
Epn3
Cct2
Napepld
Nup85
Gcn1
Adam22
Rasgrp2
Tdh
Zyg11a
Slc46a3
Scrt2
Ttc9b
Asap1
Stc2
Cds2
Adamts20
Kmt2c
Nphp3
Ralb
Fam107a
Chst15
Actn1
Rtcb
Mical1
Phyhipl
Spink2
Car14
Fam160b2
Tprn
Dctn4
Tmem42
Fgf4
Ttc22
Coa4
Apoe
Gm4925
Arl1
Dgkh
Xpo6
Zfp839
Tle6
Tvp23a
Tnk2
Mapk3
Phf20
Gm3285
Yars2
C2cd2
Adgra2
Spg20
Slc35f2
2300009A05Rik
Csnk2a1
Ndufa6
Tha1
Tfg
Rassf8
Eif4e
Sox2
Pcbp2
Spry2
Timm44
Fn1
Neil1
Spint1
Srpr
Foxred1
Slc25a36
Hinfp
Dna2
Rheb
Gm10318
Trim36
Fzd10
Fnta
Ptpn14
Baz1b
Ppm1n
Sclt1
D3Ertd751e
B3gnt2
Barx2
Hacd1
Dcaf11
H3c11
Sec22b
Cep112
Tor4a
Ptdss2
Slc27a2
Mylip
Pias3
Crocc
Prkar1a
Trim68
Tubb5
Gabbr1
Gm3173
St6galnac2
Klc3
Clip4
Per3
Gpm6a
Zfand6
Togaram1
Klhl28
Tob1
Slc14a1
Pdk1
Fbp1
Vgll3
Sspn
Afap1l2
Sdc4
Klhl22
Npcd
Cbx6
Gm19668
Ppara
Neurog3
Parp12
Tcirg1
Ddb2
Proser1
Nhlrc3
Usp36
Pcbp1
Slc39a7
Rxrb
Hsdl1
Dnaaf1
Trim8
Itga1
Dipk1c
Mafg
Faap20
Tpm1
Mob1b
Nfatc3
Ptp4a2
Srd5a3
B4galt2
Prickle1
Steap3
Mad2l2
Draxin
Ptpn3
Irx2
Sbk2
Upp2
Acvr1
Rufy3
Rsph4a
Plcb4
Pyurf
Zfp286
Ost4
Pdrg1
Setx
Vsx1
Dus2
Ddx28
Gapvd1
Cic
Tdrd3
Hcn1
Nacc1
Ptch1
Trmt1
Cand2
Nectin2
Rprd2
Chd7
Kank2
Zfp24
Cacng2
Umad1
Rpa3
Cox5a
Mob1a
Cers2
Anxa9
Shcbp1l
Mllt1
Kctd9
Cdca2
Dner
Tbc1d9
Mtap
Lama5
Arhgap24
Dvl1
Dab1
Csnk1a1
Ppm1a
Trp53bp1
Nmnat3
G0s2
Shc4
Rtkn
Unk
Herc6
Slc9a3r1
Pkm
Slc40a1
Coro2a
Cluh
Srek1
Rps23rg1
Pik3cd
Castor1
2210016F16Rik
Mnt
Slc25a22
Hdgf
Ndfip2
Fahd2a
Ptpdc1
Abi2
Axl
Klf13
Sec31a
Ryr2
Trim13
Mettl9
Atad2b
Gm2237
Hells
Trip10
Dis3l
Bag3
Scaf11
Ggnbp2
Pdp2
Caprin1
Hsp90ab1
Usp10
Pdzd2
Msrb2
Ran
Proser2
Fam102a
Cachd1
Hjurp
A730008H23Rik
Numa1
Plekha7
Slc35d1
Esrp2
Phc2
Fbxo25
Cit
Zfp976
Hspb1
Igf2bp3
Icam1
Zfp996
Fam162a
Ccdc58
Chrna9
Denr
Hhip
Mpc2
Dcaf6
Polr2b
Noa1
Fgfr2
Zhx1
Utp15
Ankra2
Cfap20dc
Kcnk9
Mturn
Mrpl49
Fau
Col27a1
Gtf3c4
Vti1b
Prlr
Git2
Tmem161a
Gabrb3
Zkscan5
Myrip
Utp18
Mbtd1
Cass4
Chst5
Calm2
Fam149a
Tvp23b
Morf4l2
Kcnq2
Zfp280d
Pcgf6
Csrp2
Zfp319
Usb1
Gpcpd1
Otud4
Polr3g
Mblac2
C1ql3
Malt1
Hes3
Mtfr1l
Tef
Cacng7
Pcolce2
Il17rd
Slc30a10
Avl9
Mboat1
Iqcc
B3gnt4
Tmem178
Rgl2
Zfhx3
Ncoa2
Plag1
Chchd7
Col2a1
D5Ertd579e
Kctd12
Csk
Kcnq1
Dhrs7b
Ubtd1
Mms19
Top3b
Adamts7
Sf3a1
Ccdc157
Sh3tc1
Ntng1
Cux2
Gm9639
B230219D22Rik
Bend3
Zfp385b
Gm3739
Csnk1g2
Pms1
Ormdl1
Mfap3l
Slc35g2
Tnfrsf8
Angptl4
Retreg1
Pard6g
Rps29
2510009E07Rik
Setdb2
Gm45935
Cab39l
Ccdc194
Kcnip4
Btla
Pdzd4
Slc26a5
Timm9
2700049A03Rik
Smim1
Socs2
Fus
Gm17660
Otulin
Med4
Lig4
Mcat
Dab2ip
Scgn
Gm3448
Gm3417
Gm3435
Epb41l2
Dap3
Mettl14
Celf4
Clcn4
Pnkd
Fignl1
Hnrnpu
Aamp
Atf2
Kbtbd2
Slc13a2
Rnf103
Hmx3
Neil2
Cmtr1
Mrps23
Unc5b
Foxp1
Elmod1
Ppp1r13l
Cd3eap
Cep63
Anapc13
Slc17a5
Hoxd3
Sntb2
Cenpm
Tfpi
Gmeb2
Sap18b
Sap18
Rnf220
Gm3233
Slc22a23
Wiz
Gclm
Hs3st4
Sh3pxd2a
Gm2696
Krtap10-10
Lpar2
Extl3
Pus3
Ddx25
Paip1
Phf23
Bcl10
Rrbp1
Raph1
AI661453
1700001C19Rik
Mib1
Add1
Lypd6b
Tmem189
Psd3
Gm42517
Vav2
Gm9736
Akt2
Fbxl15
Cnot2
Sco2
Ece1
Rab42
Lsm2
Ubr7
Nos1ap
Mov10
Phldb1
Lgmn
Tmem200c
Smndc1
Epb41l3
Mybl1
Suz12
Recql4
Lrrc14
Tmem121b
Zfp217
Igfbpl1
Slc25a44
Map1lc3a
Entpd4b
Entpd4
Tstd1
Nefh
Ap1b1
Slc66a2
Phlda3
Sf3b3
Cog4
Atf7
Mtf1
Spred1
Dll1
Cln5
Cenpb
Fam169b
Rell1
Ano6
Kcp
Mxd3
Lsm14b
Nadsyn1
Dhcr7
Efs
Slain2
Ahdc1
Rnaset2b
Ssh1
Pm20d2
Ap1g1
Slc19a1
Srsf6
Nid2
Dnttip2
Slc25a24
Uhrf2
Ghitm
Ddx3x
Rest
Oplah
Fam219b
Myef2
Sbno1
Ttc28
Krba1
Samd12
Afap1
Tmem170b
Gm14393
Smad6
Nadk2
Trmt61a
Ccdc66
Mlf2
Kcnq3
P3h2
Msra
Kmt2a
Robo1
Ppm1m
Adprh
Qser1
Dpf3
Klhl2
Tspan17
Gosr2
Phactr4
H2az1
Mamstr
Utp23
Nrros
Plekhh1
6430571L13Rik
Mfsd13b
Cdr2
Naaa
Lrrc8b
Cst3
Abca8b
Sowahc
Septin10
Sox7
9030025P20Rik
Fbxo30
Abl1
Cyp4x1
Rcsd1
Ipo8
Ugp2
Slc39a8
Dmkn
Actr1b
Tmem106c
Ehmt2
Tmem154
Snx15
Gcnt4
Fam20b
Epb41l4b
Atp11a
Ngf
Ccnjl
Ptdss1
Mterf3
Jade3
Klhl34
Tmem168
Prune1
Ndufab1
Adra1a
3110082I17Rik
Cap1
Ap1g2
Mpc1
Syne2
Ppat
Paics
Ninj1
Ctdsp2
N4bp1
Ube2t
Dsn1
B4galt1
Sall4
Limk2
Lhx1
Yod1
Mapkapk2
Klf4
Ago3
Npepps
Sun1
Eif4g2
Dmwd
Kcng3
Jpt1
Rad51ap1
D6Wsu163e
Nfkb1
Csrnp1
Ankrd6
Cxcl11
Epm2a
Btf3l4