ChIP-Atlas: Target genes

Potential target genes for Zic3

Query protein: Zic3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX147572 | ES cells
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Zic3's Target genes

◢ Zic3: Average

◣ SRX147572: ES cells

◢ SRX6879008: ES cells

◢ SRX7546911: ES cells

◢ SRX7546912: ES cells

◢ SRX7546913: ES cells

◢ SRX7546914: ES cells

◢ SRX823607: ES cells

◢ SRX12142046: mESCs, differentiated

◢ SRX12142051: mESCs, differentiated

◢ SRX12142055: mESCs, differentiated

◢ SRX15057955: mESCs, differentiated

◢ SRX15057958: mESCs, differentiated

◢ SRX15057960: mESCs, differentiated

◢ SRX9896071: mESCs, differentiated

◢ Zic3: STRING

Cd38
Pou5f1
Gatad2a
Wsb2
Slc6a16
Timp4
Letmd1
Prdm4
Rif1
Neurog3
Oas1g
Arfgef1
Agfg1
Cerkl
Asxl1
Slc12a4
Man2a2
Adgra2
Plekhg5
Znrf1
Atrn
Trabd
Oas1a
Apbb2
Pabpc1
Ubr5
Grb2
Trp53bp1
Mreg
Trim7
Gadd45g
Ywhae
Slc16a9
Smc6
Gen1
Stk38
Pik3r3
Phldb1
Stmn1
Tbc1d9
Serpini1
Pdcd10
Slc39a4
Lama1
Has3
Kif17
Gid8
Mpped2
Rasgef1a
G2e3
Spred1
Wdr59
Arap2
Kdm2b
Sall4
Ccdc194
Pdp2
Skil
Exoc6b
Cep70
Vezt
Fgd6
Trim72
Eno1
Myo10
Scd1
Sbk1
Prkag1
Zcrb1
Pphln1
Fubp3
Tpd52
Plcb3
Slc27a2
Coq2
Zfp964
Kmt2c
Spata24
Plcxd1
Garre1
Cep112
Stx11
Ccdc60
Ppp2r5b
Alg14
Shroom3
Fbxo5
Cacng2
Terf2
Sgk3
Car14
Mllt6
Ints9
Hmbox1
Pou2f1
Faim
Caprin1
Tgfbr1
Ywhag
Usp10
Fndc3b
Oplah
Ndrg1
Gid4
Apc
Nrros
Akt2
Tor1aip2
Tada1
Clk1
Ptch2
Glul
Rnf125
Hnrnpa2b1
Cbx3
Sbk2
Pxdc1
Donson
Dcaf11
Asap2
Meaf6
Slc38a2
Marchf7
Tulp4
Tmem131l
Cst3
Tcl1
Ksr2
Fam169b
Ngfr
Trip12
Fbxo36
Pvr
Gjc1
Hspb1
Sox2
Mapk14
Stmn2
Zscan10
Syne1
Smad7
Dnajc6
Tmeff1
Ttc9b
Snx17
Eif2b4
Cdkl2
Spry4
Tmem62
Flywch1
Kifc3
Akip1
Smarca1
Itm2b
Rtcb
Ypel1
Msc
Rbm47
Pcif1
Itga9
Nacc1
Trmt1
Fgr
Zfp410
Ncdn
AU040320
Etv6
Tbc1d5
Ubtf
Set
Cpsf4l
Msh6
Slc37a3
Prkar1a
Mmp25
Ttc28
Ndrg4
Arhgap42
Trim25
Klhl34
Gpr1
Fam81a
Pdcd2
Rpp14
Htd2
1700008O03Rik
Zfp64
Usp37
Cnot9
Skor1
H3f3a
Dhx32
Tfeb
Gab2
Zfp9
Hmx3
Cul5
Ptpdc1
Ppm1n
Calm2
Sspn
Ptpra
Ppp2ca
Gngt2
Abi3
Cmas
AI661453
1700001C19Rik
Lrrc8d
Zfp217
Efna4
Ccdc30
R3hdm2
Fam227b
Dtwd1
Cnpy1
Tcea3
Chrac1
Spag4
C1ql1
Cds1
Col13a1
Mios
Hinfp
Bmp8a
Yars2
Socs2
Shc4
Enah
Sfxn2
Arl3
Zfp36
Mxi1
Arhgap12
Nudt1
Rsph4a
Arl2
Ppp1r36
Hhip
Zdhhc6
Vti1a
Rgs12
Pde8a
Picalm
Atp2c2
Ddx20
Sptb
Zyg11a
Caps2
Inafm2
Ddx3x
Ddah2
Fam107a
Ralb
Immp2l
Prnp
Prn
Cbs
Pitx3
Nkiras2
Klhl2
Unkl
Slc14a1
Acvr1b
Smad6
Exd2
Dnttip2
Mfap3l
Mkx
Actr10
Enpp4
Tprn
Cd24a
Utp23
Grk3
App
Mllt1
Bmpr1b
Slc13a2
Glra1
Timm9
2700049A03Rik
Slc66a2
Ptdss1
Mterf3
Gprc5a
Unc13a
Ptprz1
Stx8
Cfap52
Gsx1
Fam169a
Dmtn
Idnk
Ankrd55
Abcb8
Mt1
G0s2
Lpgat1
Serinc5
Umad1
Rpa3
Gab1
Slc35f2
4930402H24Rik
Slc22a23
Ap1s1
Rnf114
Lhx1
Tle6
Dmap1
Trmt1l
Swt1
Ripply1
Nmt2
Atp2b1
Slc12a2
Fam118a
Castor1
Tmem168
Fam117a
Mov10
Bcl7c
Tmco4
Pdha1
Proser2
Tcirg1
Rbpj
Cuedc1
Hif3a
Rest
Patj
Myo1b
Chid1
Vrtn
Irgm1
Pald1
Gabbr1
Lrrn4
Pcbp2
Gna13
Timm44
Ropn1l
Epb41l4a
Trmt9b
Hip1
Smad4
Dnajc5
Thbs2
Itga5
Plaat3
Il17d
Aqp3
Slc17a5
Plin3
Shmt1
Kif5c
P3h1
AU022252
AI413582
Ppat
Paics
Mkrn2
Phactr2
Apold1
Prss38
Cd37
Brms1l
Dennd1a
Noct
Myadml2
Tent4b
Ppp1ccb
Ppp1cc
Slc25a1
L3mbtl2
Pde3a
Mlf2
Sh3rf1
Upp1
Otulin
Jak2
Cdhr1
Ap1g1
Lsm14b
Tvp23a
Prom1
Cds2
Zbtb24
Col27a1
Eapp
Prelid3a
Foxf1
Retreg1
Trerf1
Sec24d
Mroh6
Noxo1
Gfer
Mnt
Wiz
Plekha2
2410141K09Rik
Sfi1
Mapre2
Arhgap32
Zbtb25
Zbtb1
Slc25a22
Klf6
2510009E07Rik
Nanog
H1f2
Mapk4
Adgrb3
Fahd2a
Pcgf6
Parp12
Tob1
Dyrk4
Fam241b
Sco2
Usp44
Pum3
Ttc14
Tcim
Actr6
Tsga10
Pnrc1
Spag16
Ubap2
Tmem63b
Mrpl14
Adam22
Prrc1
Col8a1
Clasp2
Colec12
Tagln3
Prrc2b
Src
Abcd3
Mtfr1l
Pdzd4
Slco5a1
Cops3
Arid3c
Cutc
Cox15
Adgrg5
Mbd3
Rab4a
T2
Yod1
Tmem199
Poldip2
Zfp976
Adnp
Ccdc6
Dmkn
Klf5
Zfp62
Fam102a
Hesx1
R3hdml
Wdr61
Zfp341
Aktip
2210016F16Rik
Dhrs7b
Ccpg1os
Ccpg1
Cit
Syncrip
Gpbp1
Mapk8ip2
Rasgrp2
Gja4
Dvl1
Map4
Abca8b
Plekhh1
Shoc2
Bbip1
Ahdc1
Rbm25
Ube3c
Adgrg1
Nadk2
Zyg11b
Stra6l
Stat4
Grid2ip
Ube2d1
Polg2
Sema6a
Msra
Hsp90ab1
Gpm6a
Tbl1x
Gtf3c6
Mpc1
Acot11
Galnt16
Timp2
Ncoa1
Csrp2
Frg2f1
Foxj3
Fgfrl1
Igf2bp3
Gmcl1
Mrps15
Slc9a9
Bloc1s5
Ubl3
Chd1
Lgmn
Btf3l4
Ugp2
Mall
Lbr
Epb41l1
B3gnt2
Cux2
Slc30a2
Cyrib
Nphp3
Fam222b
Wipf1
Tjp2
Chn1
Esyt2
Rflna
Fblim1
Zdhhc2
Pxk
B3gnt7
Dynll2
Mterf1a
Loxl3
Dok1
Scgn
Crocc
Nfe2l2
1700019D03Rik
Rnf8
Map3k20
Lifr
Csnk2a1
Pdp1
Setdb2
Gm45935
Cab39l
Dgkd
Hr
Actl6b
Fzd10
Ppp1r13l
Cd3eap
Atp1b1
Kank2
Adamts7
Cfap20dc
Eif4enif1
Pipox
Kat6b
Hnrnpll
Cd55
Gm9508
Ap3b2
Trim66
Cdx1
Esrp2
Qpct
Slc25a5
Nid2
Tfg
Ppara
Ido1
Mindy2
Otud4
Rassf1
Stk32a
Hsdl1
Dnaaf1
Phyhipl
Aox1
Med12l
Rmi1
Hnrnpk
Chst15
Foxd2
Sdc4
Mettl9
Utp25
Tmed7
Eif1a
Tmem117
Apoe
Vgll3
Ginm1
Fgf4
Afap1l1
Rap2a
Hes3
Txlng
Cfhr3
Nefh
Ap1b1
Maneal
Hcfc2
Kcnj4
Nfix
Ppp1r14a
Uhrf2
Npepps
Slc9a3
Pygo2
Nup85
Ctif
Tlr2
Chst5
Wipi2
Pdpr
Rab37
Mon2
Gm20346
C1qtnf3
Fam136a
Smim14
Ist1
Tdrd3
Pum1
Slc46a3
Ndufab1
Ptdss2
Anapc10
Abce1
Gclm
Ppp3cb
Scrn3
Cir1
Bdkrb2
Slc39a3
Lpar6
Dsn1
Tdh
Dixdc1
Actn1
Ttc21b
Afg1l
Tbl1xr1
Rcsd1
Krtap10-10
Arid3b
2300009A05Rik
Per3
Tbx1
Cenpb
Igfbpl1
Dsg2
Kcnq3
Irx4
Zfp868
Reep2
Serpine1
Dnmt3l
Rheb
Zhx1
Klf13
Ints13
Fgfr1op2
Hnrnph1
Pgap6
Tvp23b
Rbbp7
Zfp169
Notch2
Recql4
Lrrc14
Pm20d2
C77080
Klhl22
Dpf1
Ints14
Ran
Sec22b
Napepld
Gtf3c4
Phax
Aldh7a1
Cped1
Mamstr
Hps3
Ccn2
Rtkn
Rnf220
Bag3
Got2
Tuba1c
Crtc1
Wdsub1
Impdh2
Mcam
Tspan17
Ccdc3
Lgi2
Nr2f6
Ppp2r2b
Pou4f2
Tab1
Srpr
Foxred1
Atrnl1
Csrp1
Cdkn1c
Ssh1
Grap2
Dym
Syndig1
Prkacb
Pik3cd
Mad2l2
Nectin2
Draxin
Secisbp2l
Urgcp
Jup
Zfp397
Eif5
1700016H13Rik
Zfp768
Prmt9
Smim1
Brpf1
Slc12a5
Katnbl1
Chst13
Cd63
Sulf1
Uhrf1bp1
Jade1
Neurog1
Maml2
Atxn3
Sh3tc1
Pccb
Ezh1
Sox12
Trim47
Traf2
Nr3c2
Tmem42
Klhl13
Socs5
Dll1
Cdh7
Wdr86
H2az2
Cdkn2aip
Cd47
Rhbdf1
Kif5a
Rell2
Hmga1b
Hmga1
Naa16
Pdgfra
Rab33b
Cass4
Mael
Otud1
Nudt8
Elavl2
Zbtb12
Slc25a36
Icam1
Daxx
Atg4c
Steap4
Gm19668
Pelp1
Appl2
Tada3
Arpc4
Bicdl1
Pot1b
Zfp518a
Hdac1
Abi2
Plekha7
Pus3
Ddx25
Sirt2
Nfkbib
Zfand6
Prickle1
H1f4
Srek1
Tent5c
Chrm4
Ssr1
Myef2
Fam13c
Fbxl15
Triobp
Smndc1
Togaram1
Klhl28
Suz12
Stk32b
Hs3st3a1
Pard6g
Phf12
L1td1
S100a10
Coil
Hectd1
Zfp977
Itsn2
Sumf2
Rprd2
Irx2
Tbc1d30
Spink2
Ntng1
Pcgf1
Fam20b
Cecr2
Tspan14
Pdk1
Ptpn11
E030030I06Rik
Cdk6
Atp11a
Gpr68
Paip1
Mrps23
Grifin
Sclt1
D3Ertd751e
Hipk2
Tor4a
Mturn
Tmcc1
Psap
Dst
Bend6
Rab30
Ipp
Cdh10
Fstl1
Slc4a2
Hmgxb4
Baz1b
Tafa3
Camk1d
Tusc1
Camk2n1
Ago3
Aldh5a1
B4galt1
Nynrin
Dync1i1
Tm4sf5
Klhl23
Nap1l1
Lrmp
Map2k5
Nudt19
Ppp2r3a
Kcnc2
Hcn1
Samhd1
Erf
Spryd4
Uchl5
Ro60
Lcor
Hectd3
Ccdc15
Ptpn3
Ptges2
Fam193a
Sin3a
Ufsp1
Rassf8
Ptch1
Pdxdc1
Mpv17l
Pld6
Ppfia1
Serp1
Eif2a
Tlk2
Bcl7b
Slc25a13
Elf4
Cep170b
Lrrtm3
AB010352
Mfsd13b
Cdr2
Ggact
Pdrg1
Fignl1
Vti1b
Ggnbp2
Gpr162
Khnyn
Cbln3
Rnf19b
Polr2d
Abl2
Sh3bp2
Tgfbrap1
AI597479
Aasdh
Erbin
Dhx40
Frzb
Fgfr2
Arhgap19
Ddb2
Pigq
Mrpl49
Fau
Neil1
Tor1b
Ldlrad4
Herpud2
Tnrc6c
Runx1t1
Papola
Tob2
Asap1
Ccdc9
Lpar2
Htr1d
Synj2
Bnc2
Btbd6
D5Ertd579e
Gne
Fam90a1b
Apoo
Wnt16
Gas2
Fancf
Plag1
Chchd7
Amacr
Fas
Lefty1
Tiparp
Cfl1
Cbll1
Coch
Pdlim5
Ntn4
Cldn4
Shank3
Trpc6
Mier2
Cep55
Trim33
Rasa2
Zfp598
Yrdc
1110065P20Rik
Zfp710
A630001G21Rik
Trim36
B4galt2
Spint1
P2ry1
Mpzl1
Mast1
Gpam
Hmces
Dcaf10
Plcb4
Mmp15
Numa1
Gdap1
Pbld2
Hnrnph3
Nedd4
Adgrl1
Fbxo27
Trp53inp2
Fbxo22
Zfp532
Rnf180
Foxp1
Nup153
Oxt
Rap1b
Nudcd3