ChIP-Atlas: Target genes

Potential target genes for Zic3

Query protein: Zic3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX15057960 | mESCs, differentiated
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Zic3's Target genes

◢ Zic3: Average

◢ SRX147572: ES cells

◢ SRX6879008: ES cells

◢ SRX7546911: ES cells

◢ SRX7546912: ES cells

◢ SRX7546913: ES cells

◢ SRX7546914: ES cells

◢ SRX823607: ES cells

◢ SRX12142046: mESCs, differentiated

◢ SRX12142051: mESCs, differentiated

◢ SRX12142055: mESCs, differentiated

◢ SRX15057955: mESCs, differentiated

◢ SRX15057958: mESCs, differentiated

◣ SRX15057960: mESCs, differentiated

◢ SRX9896071: mESCs, differentiated

◢ Zic3: STRING

Cd38
Alg14
Ufsp1
Gatad2a
Timp4
Gid4
Atrn
Man2a2
Letmd1
Asxl1
Prdm4
Pabpc1
Car14
Znrf1
Eno1
Trabd
Smc6
Gen1
Lama1
Donson
Apbb2
Zfp410
Chd1
Arfgef1
Sbk1
Apc
Ywhae
Gm9736
Rbm47
Glul
Ints9
Hmbox1
Irgm1
Grb2
Terf2
Colec12
Zcrb1
Pphln1
Sfxn2
Arl3
Vezt
Fgd6
Itm2b
Mkx
Flywch1
Tbc1d5
Pxdc1
Ubtf
Spata24
Tagln3
Zfp964
Klhl1
Qpct
Hcfc2
Wdr59
Mreg
Ddx20
Slc12a4
Marchf7
Wsb2
Nkiras2
Gm19668
Pitx3
Adnp2
Pcif1
Fbxo5
Faim
Dynll2
E030030I06Rik
Coq2
Enpp4
Pacsin2
Pdcd2
Kif17
Ptprz1
Tmc7
Chrac1
Exoc6b
Tbc1d9
Wipi2
Mmp25
Mios
Prkag1
Ptch2
Arid3c
Arap2
Mylpf
Tbc1d10b
Brms1l
Fstl1
Snrnp70
Gm10318
Ptpdc1
Mapk3
Slc37a3
Polg2
Slc6a16
Pik3r3
Ndrg1
Ifitm1
H3f3a
P3h1
AU022252
Mrc1
Zfp9
Rnf125
Zdhhc6
Vti1a
Notch2
Arhgap32
Tmed7
Eif1a
Ptpra
Mapk14
R3hdm2
Plcxd1
Tfpi
Asap2
Cep70
Tmem131l
Cdkn2aip
Rtcb
Mpped2
Shoc2
Bbip1
Sh3rf1
Kdm2b
Abl2
Hipk2
Tanc1
H2az2
Nudt1
Ncoa1
Pde3a
Kif5c
Pnrc1
Arl2
H1f2
Neurog3
Lefty1
Tmco4
Ncdn
AU040320
Slc14a1
Frzb
Cfap300
Cerkl
Slc16a9
Prelid3a
Trip12
Fbxo36
Mthfd2l
Ccdc30
Pum3
Slco5a1
Col13a1
Trim36
Fcor
Pum1
Rnf114
B3gnt7
Fbxl7
Mterf1b
Dennd1a
Tsga10
Arhgap42
Gm3285
Prrc2b
Stk32a
Cacng2
Cul5
Lifr
Gm9508
Cep55
Snn
Bcl7b
Acot11
Pdrg1
Coil
C1ql1
Mbd3
Skil
Phlpp2
Ddah2
Tdrd3
Tmem62
Fgfr2
Ednrb
Rheb
Klf5
Pdpr
Enah
Arhgap24
B3gnt4
Phf10
Tada1
Pdia3
Catsper2
Ppp2r5b
Cdkl2
Agfg1
Zbtb25
Zbtb1
Rnf8
Ppp2r3a
Gm3233
Cds1
Adam22
Usp37
Cnot9
Grin2c
Sema6a
Mapre2
Vrtn
Rasgrp3
Atxn3
Lrrc8d
Snx17
Eif2b4
Pcdhgb6
Adgra2
Mapk4
Serpini1
Pdcd10
Slc12a2
Mterf1a
Tef
Chid1
Gdpgp1
Cib1
Ubr5
Zfp868
Pdp2
Hdac1
Gm2696
Myo10
Nacc1
Trmt1
Fam107a
Rpp14
Htd2
Garre1
Hnrnpa2b1
Cbx3
Cacng7
Hif3a
App
Apoe
Exd2
C2cd2
Vdac3
Ppp1ccb
Ppp1cc
Slc9a3r1
4930402H24Rik
Wdr61
Ppp2ca
Smarca1
Casc3
Epn3
Pou2f1
Smad7
Syne1
Crocc
Kcnn2
Slc39a4
Msc
Ypel1
Krtap10-4
Srrm4
Tfeb
Rtkn
B3gnt2
Lhx1
Zfp976
Mturn
Ppp1r36
Tmem119
Golm2
Tmeff1
Mllt1
Scd1
Nphp3
Srd5a3
Pald1
Dmtn
Ptch1
Slc4a2
Wnt11
Ccdc60
Trip10
Tor1b
Parp6
Pgrmc2
Pygo2
Zfand6
Lrrn4
Tgfbr1
Mpc1
Chst15
Tvp23a
Ptpn14
Actn1
Ttc28
Tor4a
Ttc21b
Rab4a
Sptb
Smad4
Mafg
Tmem161a
Pou5f1
Got2
Hapln4
Naa16
Jade3
Prex1
Prnp
Prn
Loxl3
Dok1
Aktip
Fam227b
Dtwd1
Hsdl1
Dnaaf1
Tle6
G2e3
H2-DMa
Brd2
Ropn1l
Msh6
Spink2
Cd24a
Napepld
Lgmn
Gsx1
Appl2
Dnajc10
2300009A05Rik
Hivep2
Cep112
Sec22b
Poc1b
Galnt4
Stmn1
Mapk8
Cdhr1
Ttc9b
Scrt2
Fam136a
Kcnq3
Ccn2
Hnrnpll
Glra1
Cd47
Kcnip4
Tprn
Grid2ip
Fam118a
Map3k20
B4galt2
Neil1
Actr10
Ralb
Akt2
Fut4
Tapbp
Trim25
Rasgrp2
Mrpl49
Fau
Slc22a23
Mamstr
Vsir
Ssh1
Chn1
Sorbs3
Pvr
Atg5
Tent5c
Meaf6
Phc2
Zfp64
Asap1
Prom1
Rbm24
Ptk7
Ift140
Cramp1l
Dmap1
Coro2a
Slc13a2
Lfng
T2
Mt1
Adamts7
Kctd9
Cdca2
Gngt2
Abi3
Trim68
Fn1
Spag4
Cep63
Anapc13
Zfp286
Fam178b
Klhdc8b
Ccdc71
Picalm
Sugt1
Atp1b2
Gab2
Brwd1
Usp13
Sdc4
Spg20
Utp14b
Acsl3
Retreg1
Cd160
Stx11
Tab1
Tmem42
Dgkd
Raph1
Srpr
Foxred1
Rrbp1
Tmem199
Poldip2
Cuedc1
Gpsm2
Cnn3
Usp10
Zfp62
Sec22c
Rab37
Shroom3
Stc2
Slc25a24
Pus3
Ddx25
Nbea
Socs5
Kcnj4
Zfp341
Adamts20
Pelp1
Unkl
Abi2
Coq8b
Spint1
Recql4
Lrrc14
Reep2
Phyhipl
Syde2
Ccdc9
Dleu7
Rmi1
Hnrnpk
Foxf1
Nsrp1
Slain2
Dcaf11
Tmem104
Nat9
Clic1
Zfp36
Slc66a2
Rcsd1
Fnta
Bcl10
Efemp1
Lpgat1
Ntng1
Tcirg1
Col27a1
Ppp3cb
Smarce1
G0s2
Phf20
Jak2
Ptk2b
Mad2l2
Draxin
Gm3250
Gjc1
Abca8b
Rassf8
Rbm45
Rtn4rl1
Klhl34
Uhrf1bp1
Myrip
Castor1
Rrm2
Pik3cd
Zyg11a
Cluh
Clasp1
Cfap20dc
Usp36
Mfap3l
Fbxl19
Med12l
Dhrs7b
Wbp4
Elf1
Synj2
Ost4
Efna3
Slc25a22
Tpm1
Umad1
Rpa3
Tlr2
Rif1
Foxp1
Mtfr1l
9930012K11Rik
Tmem63b
Mrpl14
Timm44
Mrps15
Slc30a9
Csrp2
Dner
Pcgf6
Cux2
Fahd2a
Gas2
Fancf
Gm19402
Prmt8
Tmem229a
Kcnc2
Plaat3
Ndufab1
Zfp217
Slc9a3
Tbl1xr1
Smim1
Tdh
Hr
Hoxc13
H3c13
H2bc18
Fbxo11
Zhx1
Mical1
Gm17660
Il17d
Ust
Immp2l
Xbp1
Kctd12
Rad52
Fam171a1
Lrrc8b
Cand1
Gne
Col26a1
Ugp2
Eif4e
Phldb1
Yars2
Fam90a1b
Apoo
Psd3
Gm3238
Dctn4
Ap1g2
Coa4
Zfp839
Gm9639
Rnf11
Tmem121b
Mob4
Thsd7a
Zeb2
Inf2
Hmx3
P2ry1
Wiz
Csnk2a1
Slc35d1
Cd63
Tfg
Wscd2
Ap1g1
Stra6
Angpt1
2210016F16Rik
H3c15
H3c14
Zbtb12
Per3
Cox5a
Ap3b2
Gm10100
Sall4
Maz
Klhl22
Fads1
Trim8
Prmt9
Epb41l4a
Dhx32
Gna13
Ddb2
Kank2
Caps2
Gm3739
Ndrg4
Tle4
Trerf1
Cpsf4l
Sap18b
Sap18
Tulp4
Hmgxb4
Ppat
Paics
BC107364
Aff4
Megf8
Rnaset2b
Rnaset2a
Hoxb3
Syne2
Proser2
Tha1
0610010K14Rik
Klhl2
Scaf11
Nfkb1
Plcb4
Gabrb3
Susd2
Iqch
Aagab
Ssr1
Myo1b
D5Ertd579e
Inafm2
Exosc6
Mnx1
Vrk1
C1ql3
Pkm
Rnaseh2b
Ago3
Lpar2
Adnp
Rgs12
Nup85
Snap29
Pi4ka
Slc46a3
Racgap1
Mink1
Obsl1
Inha
Pdha1
Tcf7l2
Cbs
Adgrg5
Pms1
Ormdl1
B3galt1
Tmem200c
Fermt2
Mgat1
Mob1a
Rnf38
Fhl3
Clip4
Tafa3
Trim7
Baz1b
Tbx1
Tiparp
Ido1
Cdr2l
Stat5b
Set
Hnrnpr
Zdhhc2
Kcnab3
Irx2
Scrt1
Fbrsl1
Ksr2
Pcmt1
Lats1
Gse1
Slc17a5
Fam241b
Hhip
AI413582
Ptdss2
Bloc1s5
Srpx
Rbpjl
Zbtb24
Cmas
Zfp319
Usb1
Dgkh
Oplah
Rhbdf1
Setx
Gja4
Trim72
Suz12
Hinfp
Nynrin
Atoh8
Myo5b
Plag1
Chchd7
Ptpn3
Zfp663
Exoc7
Dsn1
Scgn
Gosr2
Il17rd
Tsc22d3
Klf4
Dnttip2
Mob1b
Alx3
Ube3c
Hnrnpu
Accs
Sclt1
D3Ertd751e
Krtap10-10
Mef2b
Mkrn2
Msra
Slc25a44
Abr
Gpbp1
Slc35g2
Kcna2
Slc5a6
Atraid
Atrnl1
Pdpk1
Prune1
Hmga1b
Hmga1
Tmem168
Grap2
Hmgb3
Unk
Hacd3
Slc18a3
Chat
Hpca
Slco4c1
Dvl1
Gmeb2
Tmed3
Slc31a1
Fkbp15
Hsf2
Magi3
Ube2d1
Bcap31
Abcd1
Camk2n1
Hcn1
Mettl9
Fastk
Hectd1
Uhrf2
Sowahc
Septin10
Zfp36l3
Tnk2
Mycbp2
Ralyl
Csnk1g2
P3h2
Btbd1
Cdk6
Mboat1
Zfp977
B230219D22Rik
Shmt1
Epb41l3
Fam110c
Trmt61a
Vgll3
Zkscan5
Ints14
Sbk2
Ppfia1
Washc4
2610528J11Rik
Dtx1
Foxd2
Arid4b
Gcnt4
Timm9
2700049A03Rik
Rprd2
Zfp687
Plekha7
Trim66
Dyrk4
Cdk19
Hoxd3
Arhgap33
Adprh
Klhl13
Spry4
Prickle1
Ddx3x
Slc39a7
Rxrb
Lsm2
Prkar1a
Poll
Dpcd
Hspb1
Igdcc4
Lsm14b
Mov10
Numa1
Afap1l2
Uqcrq
Rflna
Ildr1
Klf6
Pcbp2
Vwa8
Steap3
Tmem178
Galk1
Gm3173
Traf2
Cpxm1
Dtnbp1
Foxp4
Gtf3c4
Nmnat3
Malt1
Wtap
Ndfip2
Ddr1
Sf3a1
Ccdc157
Phax
Aldh7a1
Spry2
9930021J03Rik
2700081O15Rik
Hs3st5
Igf2bp3
Ccdc6
Wdfy3
Gdnf
Axin2
Togaram1
Klhl28
Nectin2
Fitm2
Mcam
Slc25a13
Med4
Kcng3
Lrrc38
Mib1
Yod1
Slc25a36
Igfbpl1
Patj
Cdh11
Hes3
Phlda3
Lrrn1
Rnf138
Nos2
Mycl
Pdlim3
Pawr
Nfat5
Ptdss1
Mterf3
Camk1d
Impdh2
Top3b
Gm9507
Rest
Parp12
Nefh
Ap1b1
Lamb1
Sf3b3
Cog4
Htr1d
Tbc1d4
Hjurp
A730008H23Rik
Hsp90ab1
Igf2
Rela
Slc35f2
Cnot2
Fam102a
Ncoa7
Lef1
Krba1
Wnt16
Mylip
Podn
Secisbp2l
Shox2
Slc30a3
Slc39a8
Cnnm4
Adgb
Spata2l
Six2
Kcnt1
Setdb2
Gm45935
Cab39l
Zfp385b
Tmtc4
Rgl2
6430571L13Rik
Rnf220
Sulf1
Mnt
Col5a1
Mindy2
Synj1
Bag3
St6galnac2
Atp2b1
Bcl7c
Slc9a9
Vti1b
Dnm3
Clcn4
Cers2
Kmt2a
Anxa9
Clasp2
Rab18
Vash1
Gnaq
Vps51
Cln5
Ppp1r13l
Cd3eap
Pdxdc1
Mpv17l
Cct2
Stra6l
Rab42
Ccpg1os
Ccpg1
Serp1
Eif2a
Tmem70
Phf12
Btf3l4
Zfp113
Cxcl11
Rnf216
Itga1
Faap20
Mon2
Hey1
Krit1
Ankib1
3110082I17Rik
Xkr6
Sparc
Rragd
Lrrc8e
Tgfb1
Fbxl15
Anp32a
Adcy2
Ipo8
Pcbp1
Rasa2
Rgl1
Cttn
Arpc5