ChIP-Atlas: Target genes

Potential target genes for Zic3

Query protein: Zic3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: Zic3 | Average
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Zic3's Target genes

◣ Zic3: Average

◢ SRX147572: ES cells

◢ SRX6879008: ES cells

◢ SRX7546911: ES cells

◢ SRX7546912: ES cells

◢ SRX7546913: ES cells

◢ SRX7546914: ES cells

◢ SRX823607: ES cells

◢ SRX12142046: mESCs, differentiated

◢ SRX12142051: mESCs, differentiated

◢ SRX12142055: mESCs, differentiated

◢ SRX15057955: mESCs, differentiated

◢ SRX15057958: mESCs, differentiated

◢ SRX15057960: mESCs, differentiated

◢ SRX9896071: mESCs, differentiated

◢ Zic3: STRING

Alg14
Cd38
Cldn34d
Gatad2a
Slc25a4
Timp4
Ufsp1
Letmd1
Znrf1
Pabpc1
Atrn
Smc6
Gen1
Eno1
Acp5
Gid4
Wrap53
Trp53
Asxl1
Prdm4
Slc7a7
Fgf5
Man2a2
Lypla1
Spata24
Mup4
Zcrb1
Pphln1
Mycn
Setd5
Slc6a16
Cd37
Arfgef1
Gm4861
Ywhae
Vezt
Fgd6
Tmem181a
Zfp964
Wsb2
Trabd
Donson
Zfp410
Apbb2
Lama1
Colec12
Tbc1d5
Qpct
Rnf125
Grb2
Sbk1
Abl1
Ccdc30
Apc
Fbxo5
Lsmem2
Exoc6b
Sfxn2
Arl3
Enpp4
Rnf220
Cerkl
Chd1
Rbm47
Wdr59
Ubr5
Pitx3
Gbf1
Slc12a4
Mdm4
Trim62
Pacsin2
Faim
Notch2
Ints9
Hmbox1
Mkx
Ptprz1
Zfp978
Myo10
Slc16a9
Car14
Itm2b
Rnf114
Ndrg1
Zfp991
Arap2
Mreg
Ptpra
Gata4
Slc37a3
Rab19
Tagln3
Slc15a1
Serpini1
Pdcd10
Mbp
Mrpl23
Coq2
Marchf7
Cep70
G2e3
Irgm1
Mbd3
Tmco4
Pef1
Polg2
Setd1b
Ncdn
AU040320
Mpped2
B3gnt7
Zfp9
Tbc1d9
Ddx20
Adgra2
Tmem62
H1f2
Glul
Ubtf
Terf2
Gdap1l1
Tmed7
Eif1a
Nkiras2
Dnajc7
Mios
Flywch1
Prkag1
Rheb
E030030I06Rik
Cul5
Wipi2
Tmem131l
Sh2d5
R3hdm2
Ptch2
Adnp2
Cdh1
Kif17
Hoxa2
Ddah2
Pdcd2
Mab21l1
Pou5f1
Rif1
Pou2f1
Ror1
Tfeb
Macroh2a2
Asap2
Sp5
Pde3a
Chrac1
Dnaaf3
Kif13b
Lrrn2
Hes7
Sh3rf1
Arid3c
Slc26a8
Mapk14
Ppp2ca
Atxn3
Zdhhc6
Vti1a
Trim72
Rmnd5b
Irgm2
Pcif1
Pmaip1
Slc12a2
Pxdc1
Rpp14
Htd2
Hcfc2
Dynll2
Gja1
Brms1l
Plcxd1
Mib2
Cuedc1
Arl2
Nudt1
H3f3a
Cdhr1
Defb46
Fbxl7
Dhx32
Mpi
Sptb
Smad7
Tprn
Prelid3a
Golm2
Pvr
Tbc1d10b
Mylpf
Rtcb
App
Agfg1
Onecut2
Nphp3
Kdm2b
Rps6ka3
Tulp4
Cep112
Coro2a
Gjc1
Tdrd3
Hook2
Hoxb13
Esrrg
Abl2
Arhgap32
Zbtb25
Zbtb1
Tmc7
Tmem121
Trim7
Tanc1
Stmn1
Ccn2
Mea1
Klhdc3
Mllt6
Ifitm7
Bmerb1
Slc35f2
Prickle1
Frzb
Ppp2r5b
Flrt2
Klf5
Mapk4
Lhx1
Sema6a
Fam107a
Gli2
Smarcd1
Slco5a1
Trh
Soga3
Marcks
Pdp2
Rps6ka5
Chid1
Mybph
Shoc2
Bbip1
Pum3
Tsga10
Kctd6
Slc13a2
Asah2
Setx
Mcf2l
Pik3r3
Zfp36
Zfp64
H2az2
Tgfbr1
Coil
Hnrnpll
Mterf1b
Dnmt3a
Ralb
Ncoa1
Hnrnpa2b1
Cbx3
Garre1
Stx11
Ncs1
Ankle2
Usp13
P3h1
AU022252
Mllt1
Snn
Cacng2
Syne1
C1ql1
Arhgap42
D030056L22Rik
Fnta
Mterf1a
Neurog3
Fam227b
Dtwd1
Zfp980
Tada1
Fam53b
D630039A03Rik
Zfp868
Kif5c
Shroom3
Capg
Mmp25
Med12l
Gm10318
Tfpi
Sclt1
D3Ertd751e
Fahd2a
Ccdc60
Hsd11b2
D5Ertd579e
Lefty1
Hif3a
Pnrc1
Mapre2
Ndufaf4
Slc39a4
Lrrc8d
Casc3
Cort
Gna13
Klhl1
Dcaf11
Pdia3
Catsper2
Rab4a
Tmem63b
Mrpl14
Trim36
Ryr2
Exd2
4930474N05Rik
Cdkl2
Loxl3
Dok1
Ifitm1
Msc
Cep55
Olfr1034
Rtkn
Slc14a1
Rtn4rl1
Dph1
Hnrnpdl
Enoph1
Zbtb7b
Rassf8
Zfp982
Phf10
Trappc5
Fcor
Cdkn2aip
Ssh1
Ccno
Trmt1
Nacc1
Usp37
Cnot9
Snx17
Eif2b4
Zfp976
Rmi1
Hnrnpk
Cachd1
Ptch1
Stk32a
Gm9736
Rragc
Snrnp70
Grid2ip
T2
Prrc2b
Wdr61
Slc25a22
Set
Lifr
Cpsf4l
Smyd4
Rpa1
Parp6
Ms4a10
Olfr52
Snai1
Vrk1
Cd47
Jarid2
Ppp2r3a
Bcl10
Gsx1
Crocc
Rnf8
Hdac1
Lsm14b
Tigar
Slc9a3
Rgs12
Slc9a3r1
Smad4
Fkbp14
Scd1
Pdpk1
Mt1
Usp10
Nr2f6
Vrtn
Gdpgp1
Cib1
Cpt1a
Hipk2
Emb
Sema4b
Rabggtb
Cspp1
Cops5
Prnp
Prn
Ypel1
Tmem59l
Crlf1
H2-DMa
Brd2
Tdgf1
Lrrc2
Foxp1
Gm9639
Gm19668
Zdhhc2
Rtl8c
Inafm2
Fstl1
Oplah
Phlpp2
Agtrap
Lrrn4
Kcnj4
Lama5
Cds1
B3gnt2
Chst15
Dennd1a
Tfap2c
Zfand6
Zbtb22
Tapbp
Cox5a
Slc25a17
Gm3285
Msh6
Itpkc
Coq8b
Fgf6
Tbl1xr1
Nkx2-5
Ube2d1
Tmeff1
Hsdl1
Dnaaf1
Espn
Gne
Radil
Zfp62
Psmb10
Ctrl
Plekha7
Fam118a
Tox3
Spry2
Jakmip1
Lrrc8b
Trip12
Fbxo36
Umad1
Rpa3
Ackr3
Smarca1
Foxa2
Ppp1r16a
Foxh1
Unc5b
Tctex1d1
Pik3cd
Tor4a
Rest
Timm44
Mthfd2l
Nid2
Asap1
Epp13
Aoc3
Zfp341
Trim25
Fgfr2
Serpinf2
Pcgf6
Cic
Ost4
Tab1
Meaf6
Gpsm2
Ust
Gm3250
Dnttip2
Ropn1l
Castor1
Togaram1
Klhl28
Prkar1a
Rps10
Actn1
Pgrmc2
Ctr9
B3gnt4
Pelp1
Spag4
Enpp3
Pdrg1
C77080
Ap1g2
Slc4a5
Col13a1
Akip1
Ywhag
Zfp267
Pdgfra
Klhdc8b
Ccdc71
Spg20
Usp36
Duxbl3
Duxbl2
Duxbl1
Prmt9
Cst3
Phf12
Gpr179
Dmtn
Znhit2
Mturn
Mrpl49
Fau
Zhx1
Ttc21b
Abcc4
Enah
Plaat3
Tmem117
Inha
Epha1
Tle4
Trp53bp1
Ncor2
Scrt2
Tal2
Ap2m1
Schip1
Hmga1b
Hmga1
Mov10
Ptms
Glra1
Proser2
Mafg
Tcte2
Phc2
Sbk2
Ephx2
Mamstr
Cltb
Gngt2
Abi3
Tmem42
Srd5a3
Rassf4
Hic1
Speer4f1
Pygo2
Magi1
Obsl1
Ppp1r36
Pramel13
Prex1
Nefh
Ap1b1
Naa16
Erfl
Mbtps2
Cfap300
Mapk8
Zyg11a
Zfp36l1
Foxf1
Ttc28
Mapk3
Meox1
Pald1
Max
AI413582
Gpr108
Spred1
Cd300lg
Syde2
Phldb1
Mtap
Ptk7
Pdpr
Ndrg4
Abca8b
Tle6
Gbx2
B4galt2
Atp6v0b
Strn3
Ap4s1
Kazn
Cd24a
Smarce1
Shc1
Cks1b
Atg5
Flacc1
Dpp10
Tent5c
Fam136a
Mnx1
Slc7a9
Cep63
Anapc13
Sec22b
Ift140
Cramp1l
Unkl
BC003965
Fbrsl1
Spint1
Skil
2300009A05Rik
Napepld
Adam22
Chmp4c
Bcl6
Pum1
Kcnn2
C2cd2
Ptpdc1
Cmas
Cd55
Plcb4
Vdac3
Slc4a2
Cdk5
Abi2
Il17rd
Rtl8b
Stk38
Rasgef1a
Ccer2
Sall4
Slc25a44
Aktip
Tpst2
Polr2h
Fn1
Rev3l
Mmp15
Klf6
Mrps15
Kank2
Pitpnm1
Cdk2ap2
Plk3
Foxd2
Lzts2
Dab2ip
Arrb1
Itga9
Bcl7b
Parp12
Bag3
Apoe
Timm9
2700049A03Rik
Tvp23a
Gab1
Rcsd1
Cd63
Csrp1
Suz12
Cx3cl1
Rasgrp2
Kcnc2
Akt2
Rock2
Uhrf2
Ttc9b
Olfr1028
Ptpn14
Cyp51
Nup85
Clip4
Mpc1
Hmgxb4
Gja4
Trim68
Spef1
C4bp
Csn1s2a
Igfbpl1
Nodal
Utp14b
Rbm24
Acsl3
Spink2
Gm9508
Phf20
Mtfr1l
Col27a1
Prom1
Sox2
Pbk
Sec22c
Epb41l1
Baz1b
Pdxdc1
Mpv17l
Brinp1
Dab1
Picalm
Slc17a5
Sulf1
Nrf1
Olfr813
Osbp2
Lag3
Tsc22d3
Syne2
2210016F16Rik
Hivep2
Gab2
Med4
Adamts7
Gm3233
Ltc4s
Gzme
Trim8
Nfix
Tafa3
Ppm1j
Efemp1
Ednrb
Tpd52
Zfp36l2
Neil1
4930402H24Rik
Yars2
Tfg
Nsrp1
Setdb2
Gm45935
Cab39l
Zfp600
H3c13
H2bc18
Galnt12
Chn1
Got2
Plekhg5
Has3
Rybp
Dhrs7b
Poll
Dpcd
Immp2l
Dctn4
Fads1
Tmem161a
Prmt8
Slc25a47
Tle2
Sumo3
Pcbp2
Recql4
Lrrc14
Zbtb34
Hes3
Rbpjl
Matn4
Coa4
Per3
Nat8f5
Steap3
Lpgat1
Slc30a10
Zfp91
Lpxn
Stc2
Rffl
Ptpn3
Jade2
Hinfp
Smad6
Kcnq3
Reep2
Ccdc9
Gabrb3
Bhlhe40
Slc31a1
Fkbp15
Pik3r4
Slco4c1
Tigd4
Gimap3
2510009E07Rik
Tcirg1
Rbm45
Slc66a2
Ptdss1
Mterf3
Acta1
Lgmn
Trip10
Pdha1
Nbea
Fam178b
Ppp1ccb
Ppp1cc
Jade3
Cand2
Krtap10-4
Kctd9
Cdca2
Tenm4
Kcnc1
Tmem229a
Scaf11
Zbtb8a
Hectd1
Tef
Atp1a2
Numa1
Rprd2
Kcnab3
Camk1d
Slc46a3
Mad2l2
Zfp687
Zscan10
Zfp13
Plin3
A630095N17Rik
Nadk2
Klhl34
Mtfp1
Phc1
Ppat
Csnk2a1
Ralgps2
Yod1
Pfkfb2
Dyrk4
Appl2
Phyhipl
Slc22a23
Ctif
H2-T-ps
Smarcd3
Sdc1
Ptdss2
Epha4
Col26a1
Acot11
Snx15
Prr5
Pms1
Ormdl1
Fam241b
Pkm
Dgkd
Mgat1
Zfp979
Psd
Fbxl15
Ctf1
Bcl7c
Paics
Gtf3c4
Slc30a9
Csrp2
Mtarc1
Wnt11
Nkx2-2
Rab33b
Nanos3
Gadd45g
Cluh
Dnajc10
Trmt61a
Cox8b
Jund
Iqcn
Fndc3b
Mnt
Cdk6
Tspear
Gm19402
Chrna9
Tusc1
Ksr2
Abr
1700008O03Rik
Otop1
Zfp532
Trim33
Srpr
Smim1
Foxred1
Mkrn2
Igsf23
Etv6
Wscd2
H3c15
H3c14
H2ac19
H2ac18
Lax1
Slc44a4
Rab37
Slc9a9
Rrbp1
Gm9507
Gm2696
Mesp1
Tbx1
Hey1
Dusp4
Dll4
Maz
Mettl14
Klhl13
Dsn1
Zfp839
Vmn1r1
Plekhf1
Nmnat3
Tmem121b
Sp2
Ubl3
Socs5
Arhgef3
Hmgb3
Hr
Tdh
Socs2
C1ql3
Npm3
Fgf8
Ezh1
Nkx3-2
Cxxc5
Utp15
Ankra2
Tmem104
Nat9
Rnf122
Tbx20
Krtap10-10
Uhrf1bp1
Wdr86
AI661453
1700001C19Rik
Tmem256
Nlgn2
Cenpb
Nrp2
Ltb4r2
Ltb4r1
Hspb1
Cideb
Dnajc21
Clasp1
Slc25a24
Kcng3
Ckb
Slc25a1
Spdef
Ppp1r14a
Tiparp
Fam169b
Hnrnpr
Rcc2
Tlr2
Commd4
Dpf3
Zfp981
Mrc1
Wbp4
Elf1
Caprin1
Mob4
Frg2f1
Foxj3
Zfp319
Usb1
Zkscan17
Fignl2