ChIP-Atlas: Target genes

Potential target genes for Zic3

Query protein: Zic3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: Zic3 | Average
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Zic3's Target genes

◣ Zic3: Average

◢ SRX147572: ES cells

◢ SRX6879008: ES cells

◢ SRX7546911: ES cells

◢ SRX7546912: ES cells

◢ SRX7546913: ES cells

◢ SRX7546914: ES cells

◢ SRX823607: ES cells

◢ SRX12142046: mESCs, differentiated

◢ SRX12142051: mESCs, differentiated

◢ SRX12142055: mESCs, differentiated

◢ SRX15057955: mESCs, differentiated

◢ SRX15057958: mESCs, differentiated

◢ SRX15057960: mESCs, differentiated

◢ SRX9896071: mESCs, differentiated

◢ Zic3: STRING

Alg14
Cd38
Gatad2a
Timp4
Ufsp1
Letmd1
Znrf1
Pabpc1
Atrn
Smc6
Gen1
Eno1
Gid4
Asxl1
Prdm4
Man2a2
Spata24
Zcrb1
Pphln1
Slc6a16
Arfgef1
Ywhae
Vezt
Fgd6
Zfp964
Wsb2
Trabd
Donson
Zfp410
Apbb2
Lama1
Colec12
Tbc1d5
Qpct
Rnf125
Grb2
Sbk1
Apc
Fbxo5
Exoc6b
Sfxn2
Arl3
Enpp4
Cerkl
Chd1
Rbm47
Wdr59
Ubr5
Pitx3
Slc12a4
Pacsin2
Faim
Notch2
Ints9
Hmbox1
Mkx
Ptprz1
Myo10
Slc16a9
Car14
Itm2b
Rnf114
Ndrg1
Arap2
Mreg
Ptpra
Slc37a3
Tagln3
Ccdc30
Serpini1
Pdcd10
Coq2
Marchf7
Cep70
Irgm1
Mbd3
Tmco4
Polg2
Ncdn
AU040320
Mpped2
Zfp9
Tbc1d9
Ddx20
Adgra2
Tmem62
H1f2
Glul
Ubtf
Terf2
Tmed7
Eif1a
Nkiras2
Mios
Flywch1
Prkag1
Rheb
E030030I06Rik
Cul5
Wipi2
Tmem131l
Ptch2
Adnp2
Kif17
Ddah2
Pdcd2
B3gnt7
Rif1
Pou2f1
Asap2
Pde3a
Pou5f1
Chrac1
Sh3rf1
Arid3c
Mapk14
Ppp2ca
Atxn3
Zdhhc6
Vti1a
Trim72
Pcif1
Slc12a2
Pxdc1
Rpp14
Htd2
Hcfc2
Dynll2
Brms1l
Plcxd1
Cuedc1
Arl2
Nudt1
H3f3a
Cdhr1
Fbxl7
Dhx32
G2e3
Sptb
Lrrn2
Tprn
Prelid3a
Golm2
Pvr
Mylpf
Rtcb
App
Agfg1
Nphp3
Kdm2b
Tulp4
Tbc1d10b
Smad7
Cep112
Coro2a
Gjc1
R3hdm2
Abl2
Arhgap32
Zbtb25
Zbtb1
Tmc7
Trim7
Tfeb
Stmn1
Ccn2
Slc35f2
Ppp2r5b
Klf5
Frzb
Mapk4
Lhx1
Sema6a
Fam107a
Slco5a1
Pdp2
Chid1
Slc15a1
Shoc2
Bbip1
Pum3
Tsga10
Slc13a2
Tanc1
Pik3r3
Zfp36
Zfp64
H2az2
Tgfbr1
Coil
Hnrnpll
Mterf1b
Ralb
Ncoa1
Hnrnpa2b1
Cbx3
Garre1
Stx11
Usp13
P3h1
AU022252
Mllt1
Cacng2
Syne1
C1ql1
Arhgap42
Fnta
Mterf1a
Neurog3
Fam227b
Dtwd1
Tada1
Zfp868
Kif5c
Snn
Shroom3
Mmp25
Med12l
Gm10318
Tfpi
Sclt1
D3Ertd751e
Fahd2a
Ccdc60
D5Ertd579e
Pnrc1
Mapre2
Slc39a4
Lrrc8d
Casc3
Mib2
Klhl1
Dcaf11
Pdia3
Catsper2
Rab4a
Hif3a
Tmem63b
Mrpl14
Trim36
Ryr2
Exd2
Cdkl2
Ifitm1
Msc
Rtkn
Slc14a1
Rassf8
Phf10
Fcor
Cdkn2aip
Ssh1
Nacc1
Usp37
Cnot9
Snx17
Eif2b4
Zfp976
Rmi1
Hnrnpk
Stk32a
Gm9736
Snrnp70
Grid2ip
T2
Wdr61
Slc25a22
Lifr
Cpsf4l
Parp6
Cd47
Mllt6
Ppp2r3a
Gsx1
Crocc
Rnf8
Hdac1
Lsm14b
Slc9a3
Rgs12
Smad4
Scd1
Usp10
Set
Loxl3
Dok1
Vrtn
Gdpgp1
Cib1
Hipk2
Prnp
Prn
Ypel1
H2-DMa
Brd2
Mt1
Gm19668
Bcl10
Zdhhc2
Inafm2
Fstl1
Phlpp2
Kcnj4
B3gnt2
Chst15
Dennd1a
Zfand6
Tapbp
Gm3285
Msh6
Coq8b
Ube2d1
Tmeff1
Hsdl1
Dnaaf1
Gne
Cds1
Zfp62
Lefty1
Fam118a
Trip12
Fbxo36
Umad1
Rpa3
Smarca1
Unc5b
Tdrd3
Pik3cd
Lrrn4
Tor4a
Rest
Timm44
Mthfd2l
Asap1
Zfp341
Trim25
Pcgf6
Ost4
Tab1
Meaf6
Gpsm2
Ust
Slc9a3r1
Togaram1
Klhl28
Prkar1a
Actn1
Pgrmc2
B3gnt4
Lrrc8b
Pelp1
Spag4
Pdrg1
Ap1g2
Col13a1
Akip1
Klhdc8b
Ccdc71
Spg20
Usp36
Prmt9
Cst3
Dmtn
Mturn
Mrpl49
Fau
Zhx1
Castor1
Ttc21b
Enah
Tmem117
Tle4
Trp53bp1
Scrt2
Hmga1b
Hmga1
Mov10
Glra1
Mafg
Phc2
Sbk2
Prrc2b
Mamstr
Gngt2
Abi3
Tmem42
Srd5a3
Pygo2
Obsl1
Inha
Ppp1r36
Prex1
Ptch1
Nefh
Ap1b1
Naa16
Cfap300
Mapk8
Zyg11a
Foxf1
Ttc28
Mapk3
Pald1
AI413582
Syde2
Phldb1
Mtap
Ptk7
Pdpr
Ndrg4
Abca8b
Spred1
Tle6
B4galt2
Cd24a
Smarce1
Atg5
Fam136a
Mnx1
Foxp1
Cep63
Anapc13
Sec22b
Ift140
Cramp1l
Unkl
Spint1
2300009A05Rik
Napepld
Adam22
Pum1
Kcnn2
C2cd2
Ptpdc1
Ropn1l
Cd55
Plcb4
Slc4a2
Abi2
Rnf220
Il17rd
Stk38
Rasgef1a
Oplah
Aktip
Cep55
Mmp15
Vrk1
Klf6
Nid2
Mrps15
Kank2
Dnttip2
Bcl7b
Parp12
Bag3
Apoe
Timm9
2700049A03Rik
Tvp23a
Gab1
Cd63
Suz12
Vdac3
Prickle1
Rasgrp2
Kcnc2
Akt2
Ptpn14
Skil
Nup85
Clip4
Mpc1
Hmgxb4
Gja4
Trim68
Ttc9b
Utp14b
Rbm24
Acsl3
Spink2
Gm9508
Mtfr1l
Col27a1
Prom1
Sec22c
Baz1b
Pdxdc1
Mpv17l
Fn1
Picalm
Slc17a5
Sulf1
Fgfr2
Syne2
Trmt1
2210016F16Rik
Hivep2
Gab2
Adamts7
Gm3233
Foxd2
Nfix
Tafa3
Efemp1
Ednrb
Tpd52
Tent5c
Neil1
4930402H24Rik
Yars2
Tfg
Plaat3
Tbl1xr1
Nsrp1
Tsc22d3
Setdb2
Gm45935
Cab39l
H3c13
H2bc18
Chn1
Fbrsl1
Got2
Has3
Rybp
Dhrs7b
Poll
Dpcd
Immp2l
Dctn4
Fads1
Tmem161a
Pcbp2
Recql4
Lrrc14
Rbpjl
Per3
Proser2
Lpgat1
Slc30a10
Coa4
Hinfp
Steap3
Smad6
Cox5a
Kcnq3
Reep2
Rcsd1
Ccdc9
Gabrb3
Slc31a1
Fkbp15
Cmas
Slco4c1
2510009E07Rik
Tcirg1
Rbm45
Slc66a2
Ptdss1
Mterf3
Lgmn
Pdha1
Nbea
Ppp1ccb
Ppp1cc
Jade3
Cand2
Krtap10-4
Kctd9
Cdca2
Stc2
Tmem229a
Scaf11
Hectd1
Tef
Numa1
Rprd2
Camk1d
Slc46a3
Mad2l2
Zfp687
Plin3
Nadk2
Klhl34
Csnk2a1
Yod1
Dyrk4
Appl2
Phyhipl
Ctif
Ptdss2
Col26a1
Acot11
Snx15
Pms1
Ormdl1
Phf20
Fam241b
Dgkd
Fbxl15
Bcl7c
Trip10
Ppat
Paics
Gtf3c4
Slc30a9
Csrp2
Wnt11
Cluh
Dnajc10
Trmt61a
Fndc3b
Mnt
Gm19402
Chrna9
Tusc1
Ksr2
1700008O03Rik
Trim33
Srpr
Smim1
Foxred1
Mkrn2
Etv6
Wscd2
Cdk6
H3c15
H3c14
Rab37
Slc9a9
Rrbp1
Tbx1
Maz
Mettl14
Klhl13
Dsn1
Nmnat3
Tmem121b
Gna13
Socs5
Gm2696
Hmgb3
Hr
Tdh
Socs2
C1ql3
Gadd45g
Utp15
Ankra2
Pdpk1
Tmem104
Nat9
Rnf122
Krtap10-10
Zscan10
Nlgn2
Cenpb
Hspb1
Clasp1
Slc25a24
Kcng3
Slc25a1
Ppp1r14a
Tiparp
Fam169b
Hnrnpr
Tlr2
Dpf3
Mrc1
Wbp4
Elf1
Caprin1
Mob4
Frg2f1
Foxj3
Zfp319
Usb1
Tpm1
Ndufa6
Dmap1
Actr10
Sugt1
Ninj1
Lama5
Prmt8
Fut4
Nectin2
Fgfrl1
Atp1b2
Cds2
Ppp3cb
Draxin
Cnot2
Fam171a1
Myo1e
Bcap31
Abcd1
Map3k20
Sf3a1
Ccpg1os
Ccpg1
Ccdc157
P2ry1
Dusp10
1700056E22Rik
Tmcc1
Ntng1
Cfap20dc
Caps2
Eif4e
Slc22a23
Col5a1
Spast
Erc1
Uhrf1bp1
Pdgfra
Mgat1
Pm20d2
Fam90a1b
Apoo
Dennd2c
Chd7
Fyn
2700081O15Rik
Avl9
Usp32
Exosc6
Rell1
Chrm4
Ube3c
Trim8
Mfap3l
Rnf103
Retreg1
Galnt16
Ppara
Unk
Cltc
Trerf1
Arid4b
Pcgf1
Brwd1
Uhrf2
Nyap1
Fut10
Stx8
Cfap52
Plekhh1
Cxcl11
Itga9
Slain2
Clcn4
Abr
Dvl1
Tmem170b
Lpar2
Zbtb12
Tha1
Racgap1
Zeb2
Nadsyn1
Dhcr7
Zkscan5
Cdk19
Arhgap19
Afap1l2
Gcnt4
Sdc4
Pld6
Mob1a
Adamts18
Iqgap2
Xpo6
Adnp
Zbtb24
Zfp286
Ipo8
Iars2
Pkm
Clk1
P3h2
Clasp2
Tmtc4
Cdc16
Atp9a
Bloc1s5
Cacng7
Ap3b2
Rrm2
Wipf1
Usp48
Crh
Ahdc1
Malt1
Hes3
Cand1
Inf2
Ido1
Ptpn3
Sbno2
Camk2n1
Hhip
Epm2a
Amd2
Amd1
Cfl1
Hapln4
Dab1
Msra
Susd2
BC107364
Epn3
Btf3l4
Pcmt1
Lats1
Fam102a
Hs3st5
Pdzd2
Plekha7
Dse
Poc1b
Mindy2
Cnn3
Cachd1
Epb41l4a
Tor1b
Ddx3x
Jak2
Adam12
Fam107b
Lamb1
Mink1
BC031181
Setx
Myadml2
Rnf216
Atp6v1c2
Trmt9b
Mn1
Phactr2
C77080
Tob1
Xbp1
Upp2
Kcnab3
Nfe2l2
Fbp1
Pyurf
Midn
Fam161a
Stk32b
Zfp787
AB010352
Vsx1
Gmeb2
Impdh2
Hey1
Hcn1
Vgll3
Igf2bp3
Rhbdl3
Slc27a2
Triobp
Zdhhc4
Phax
Aldh7a1
Snap29
Pi4ka
Fcho2
Utp23
Adamts20
Spry4
Ugp2
Mettl9
Sco2
Tmem119
Hmx3
Smyd2
Sh3gl3
Hoxd3
Cbll1
Gpbp1
Mpzl1
Klf1
Ripply1
Dab2ip
Chrd
Rbms1
Pnkd
Jpt1
Lingo1
Tubb5
Tmem168
Krba1
Ccdc6
Mycl
Wbp11
Pdp1
Pdik1l
Hs3st3a1
Dner
Nrros
Ppm1n
Htr1d
Slc35g2
Fubp3
Lypd6b
Wnt16
Mapkapk2
Axl
Zyg11b
Raph1
Hoxc13
Slc22a17
Ubtd1
Mms19
Iqch
Aagab
Ap1g1
Tmem178
Hsp90ab1
Nt5c3
Sap18b
Sap18
Txlng
Dus2
Ddx28
Coch
Cux2
Kcna2
Grap2
Pcbp1
Wiz
Prune1
Ccdc194
Pex11g
Fbxo25
Trmt1l
Swt1
Mylip
Kmt2c
Klhl22
Fam20b
G0s2
Afg1l
Rnaseh2b
St6galnac2
Ghitm
Zfp217
Zfp839
Plekhg5
Fignl1
Klf4
Kctd12
Rad52
Ago3
Hnrnpu
Hip1
Actl6b
Podn
Trim66
Fitm2
Top3b
Pcdhgb6
Cped1
Gabpb2
Ginm1
Elmod1
Aff4
Pus3
Ddx25
Fbxl19
Tmem198
Chpf
Tcf7l2
Herc6
BC049715
Tdp2
Acot13
Tmem189
Tmem200c
Speg
Rock2
Rgl2
Mob1b
Galk1
Rhbdf1
Gse1
Cecr2
Ddb2
Skor1
Rab11fip1
Irx2
Barx2
Ccdc66
Sowahc
Septin10
Gm9639
Nfatc3