ChIP-Atlas: Target genes

Potential target genes for CPSF3

Query protein: CPSF3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10448665 | HeLa
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
CPSF3's Target genes

◢ CPSF3: Average

◢ SRX8018228: 293

◢ SRX8018229: 293

◢ SRX8018230: 293

◢ SRX8018231: 293

◢ SRX10448664: HeLa

◣ SRX10448665: HeLa

◢ SRX10448666: HeLa

◢ SRX10448667: HeLa

◢ SRX5441330: HeLa

◢ SRX5441331: HeLa

◢ SRX5441334: HeLa

◢ SRX5441335: HeLa

◢ SRX9237243: K-562

◢ SRX9237244: K-562

◢ SRX9237245: K-562

◢ SRX9237246: K-562

◢ SRX8945051: U2OS

◢ SRX8945057: U2OS

◢ CPSF3: STRING

PGK1
MAMDC2
ZC3H10
RPL41
ESYT1
MTRNR2L2
MSH3
DHFR
MTRNR2L1
SYNGAP1
PHF1
CUTA
ARL4D
DUX4
C6orf226
H2BC4
H2AC6
FRG2C
MUC3A
GNG14
DHPS
UBE2M
CHMP2A
IER3
FLOT1
H4C9
H2BC11
H2AC11
PHF23
GABARAP
DVL2
MTRNR2L8
PRDX2
JUNB
PRRT2
MAZ
PAGR1
PPP1R10
MRPS18B
ATAT1
SLC38A2
HES7
ALOXE3
RPL17-C18orf32
RPL17
C18orf32
CCDC200
TMEM242
H4-16
H2AJ
SYCE2
NDUFAF3
DALRD3
IER5L
STX10
IER2
H4C12
H4C11
H2BC15
H2AC15
IFITM3
IFITM1
IFITM2
TMSB4X
ADM
EDC4
SNX16
VPS52
RPS18
B3GALT4
MYC
ID3
FRG2
H4C3
H1-6
MSH4
H4C14
H3C15
H3C14
H2AC19
H2AC18
JMJD7-PLA2G4B
JMJD7
MPDU1
LOC100996842
EIF4A1
CD68
SOX15
NAT10
GADD45B
ZBTB45
SLC27A5
PACSIN3
ARFGAP2
H2BC5
H1-4
RPL26
KRBA2
H4C15
WDR74
STX5
RELA
MT2A
IKBKG
G6PD
VPS28
H2BC14
H2AC14
ADGRA1
FTH1
BEST1
PDE4A
RPS2
RPL3L
RNF151
NDUFB10
SUMF2
SYNRG
EIF4A2
RABL6
CCDC183
GAPDH
NRAS
RCC1
H2AZ1
DNAJB14
P4HB
ARHGDIA
RPL22L1
H4C2
H3C2
H2AC4
H4C1
H3C1
H1-1
PTPN6
C12orf57
ATN1
CDK11B
CDK11A
SLC39A7
RXRB
RING1
HSD17B8
RPL12
LRSAM1
PTMA
RPS28
NDUFA7
MRI1
C19orf53
CTDSP1
NOP53
CHD2
ZNF628
NAT14
SSC5D
ART1
H2BC12
H2AC12
RHOB
DDIT4
RAD23A
CALR
ABTB1
H2BC21
H2AC21
H2AC20
COX18
SLC3A2
RPL13
CPNE7
PDCD2L
NPDC1
ENTPD2
AKAP8
TUBB
MDC1
TRIM8
CCDC24
MRPL2
KLC4
CUL7
H4C6
H4C7
H3C7
H2BC9
SIX5
DMPK
SLC35E3
WDR46
RGL2
PFDN6
ZFX
ZBTB22
TAPBP
DAXX
C1QTNF8
PRKAG1
WDR37
IDI1
PSMG1
MT1M
MT1E
POLG2
DDX5
CEP95
CLN8
MRPS16
DNAJC9
SLC25A11
RNF167
PFN1
ENO3
BRF2
POMZP3
ZBTB37
WDR6
DUSP2
ASTL
GRAMD2A
FTL
RRP36
MEA1
MID1IP1
RHBDL1
WDR24
STUB1
JMJD8
MOGS
WBP1
INO80B
SCRIB
CEBPB
H3C12
H2BC17
H2AC17
UNK
H3-3B
FAM131A
ZNF446
ZNF324
MRPL28
H1-2
H3C3
H3C6
INTS5
GANAB
H2BC8
H2AC8
ZNF34
RPL8
ZBTB12
EHMT2
C2
DAPK3
VTI1B
MVP
CXorf38
LY6L
TMEM230
PCNA
GGA2
GAMT
TRIM37
MRM1
DHRS11
LOC102724770
DGCR6
SLC50A1
EFNA1
DPM3
ADAMTS10
UCKL1
ZWILCH
SNAPC5
RPL4
SECISBP2
CKS2
P2RY11
EIF3G
PPAN-P2RY11
PPAN
CIRBP
RIT1
FAM174C
TMSB10
LDHC
SIT1
CCDC107
ARHGEF39
MAF1
WDR97
PFDN5
MYG1
SH3BGRL3
FAM228B
TP53I3
SF3B6
FLOT2
DHRS13
ZNF48
ZNF771
RPS15A
CDK16
NADSYN1
DHCR7
GPAA1
EXOSC4
RPL10
DNASE1L1
ZNF703
TNFRSF12A
THOC6
HCFC1R1
CLDN6
CENPA
ARHGAP39
RCE1
C6orf47
BAG6
APOM
GPANK1
CSNK2B
KIF2C
RPL35
ARPC5L
WDR38
BORCS6
PRKRIP1
EIF1
NOP56
IDH3B
UBB
ZNF581
ZNF580
CCDC106
TSSK4
ZNF653
MDP1
CHMP4A
SLC16A3
TOM1
SETD1A
ORAI3
NFKBIA
MRPL53
ID1
PHLDA1
NAA10
ARHGAP4
PIP5KL1
DPM2
IRX3
RPS11
RPL13A
MAML1
SFN
SCAMP3
FAM189B
COX20
TUBA1B
CCDC34
ATP5F1E
MAPKBP1
ABCB6
RNASEK
C17orf49
BCL6B
MSH5
MPIG6B
LY6G6C
DDAH2
CLIC1
MAT2A
RABGEF1
H4C5
H3C4
H2BC7
H2AC7
H4C4
HNRNPA1
CBX5
STPG3
FAM166A
UBC
NELFB
TUBB4B
KMT5B
TEDC2
NOLC1
HAX1
NPM3
FGF8
C2CD4C
RECQL4
LRRC14
LRRC24
C8orf82
HPDL
MUTYH
KLRC2
RNF223
IGF2BP3
H3C10
H2BC13
H2AC13
EPN1
MTFP1
GPN2
UBTF
GAS2L1
HMBS
DPAGT1
H2AX
PDPK1
CEMP1
AQP3
CEBPA
CDH24
CXCR5
TSC22D1
MLLT6
PYCR3
TIGD5
EEF1D
SP3
TBK1
VEZF1
TNFSF13
SENP3
SURF6
DYRK1B
CD79A
ARHGEF1
ZNF584
H3C13
H2BC18
H1-10
ABHD10
NFE2
CDC42EP1
ICA1L
LGALS2
HAGHL
CCDC78
ANTKMT
METRN
GATD3B
GATD3A
VPS4A
ATP6V0C
AMDHD2
MTA2
TUT1
CFD
ZNF285
RPEL1
UQCC3
LBHD1
CSKMT
C11orf98
ZNHIT2
TM7SF2
MRPL49
FAU
PRMT3
C19orf48
LOC105372440
ACP4
NUDT1
MRM2
MAD1L1
NKIRAS1
RPL15
PHRF1
HMCES
UXT
ELK1
EEF1A1
GMPPB
AMIGO3
RAB40C
VWA7
MRPL40
HIRA
HCN2
CAMK2N2
SNAP47
JMJD4
TSPAN31
MARCHF9
CDK4
AGAP2
PHOX2A
PCBP1
TUSC2
RASSF1
HYAL2
ISY1-RAB43
ISY1
ROPN1L
FUT11
CHCHD1
RPL10A
COL23A1
INPP5K
GET4
NXF1
NAPRT
MROH6
SLC12A6
NUTM1
NOP10
CELSR3
RPS29
GAS1
INPP5E
FBF1
S100A6
S100A5
TIMM17B
PQBP1
RPL27A
TAOK2
ZFP36L1
SLC35A2
PIM2
PCF11
MYOZ3
NDST2
CAPNS1
OGFOD2
ARL6IP4
RBM4
GMEB2
MFSD3
HMGA1
GPT
FADS2
FADS1
VEGFB
TRPT1
NUDT22
DNAJC4
PTOV1
NANOS1
CYRIB
SELENOH
BTBD18
TRAF7
RAB26
TMEM132A
BTNL9
TMEM109
CACFD1
KIAA0895L
NOL3
PRR25
SLC2A6
CAPN15
SHC1
PYGO2
PBXIP1
LOC101928120
CTNNAL1
FHL3
PIM1
SF3A3
UPF3A
YY1
H3C8
H2BC10
TMEM134
SMIM29
TPD52L2
ABHD16B
SAT1
DRD4
TBCD
NUDT17
SRA1
SLC35A4
APBB3
EIF4EBP3
RPL23
C17orf98
SMTN
MVB12A
POMT1
FLYWCH1
STAG1
ANAPC4
FAM156B
FAM156A
CHD5
TMEM107
SGK1
VAMP2
SPOUT1
PWP2
LOC102724159
BASP1
MAPK8IP3
GTF2A2
MAN2C1
SLC25A39
C19orf71
IAH1
RPS9
DPH7
IRF2BP2
H4C8
TFPT
PRPF31
LMNB1
ARID5B
URGCP
URGCP-MRPS24
CLIC3
PPP1R15B
PSMB10
LCAT
CTRL
FAM210B
DUSP1
TMEM121
CSNK1G1
XRN1
RILP
MMP24OS
MMP24-AS1-EDEM2
EIF6
SCFD1
SNX14
NMT1
DCAKD
HMGN2
CDKN1C
TIGD3
SHOX2
RSRC1
CEBPD
HTR6
APEX2
TCIRG1
NDUFS8
ZNF513
SNX17
EIF2B4
SLC35B2
HSP90AB1
ADAT1
NFKBIE
EPN2
TAF10
RRP8
ILK
TPP1
MYL6B
MYL6
TXNIP
RPLP0
GCN1
MCCD1
ATG4D
TNS2
WDR45
PRAF2
LENG9
CRELD1
SUOX
TUBGCP6
HDAC10
SYF2
ATF4
KAZALD1
E2F3
CISD3
SPHK2
SPACA4
RPL18
FAM83E
NAA80
IFRD2
HYAL3
HYAL1
DONSON
RPL35A
LMLN
IQCG
MOV10
RPL37
PCBP4
ABHD14B
ABHD14A-ACY1
ABHD14A
THOC5
SEC14L1
PNMA1
NME4
DECR2
POLB
LGR6
TLCD1
RPL23A
RAB34
NEK8
GSTO2
SLC25A6
TBR1
C5orf15
STYX
TXN2
TTLL3
GPR137
PHF19
PTCH1
PNRC2
SLC39A1
CRTC2
CREB3L4
RGS19
OPRL1
LKAAEAR1
TULP3
C5orf24
FOSL1
FIBP
CCDC85B
PLPPR3
GNE
CKB
ROMO1
LRP2BP
ANKRD37
PYGM
FBXW4
GFAP
C11orf91
RPS15
APC2
ADK
ACTL10
CCDC138
RPL3
TTYH2
RPL38
SLC5A5
RPL18A
KRT10
KCNK4
BAD
AK1
C20orf144
PITX3
GBF1
SRSF11
VARS2
GTF2H4
MLXIP
ANP32B
TEX52
MRPS7
MIF4GD
GGA3
TRIP6
SRRT
CRK
SETD1B
RHOF
PIP4K2B
HAMP
CD320
POLD1
NR1H2
ZNRD2
FAM89B
EHBP1L1
IGF1R
APTX
CYBA
ABCA7
IL17C
ZASP
SAP25
TRABD
SELENOO
TMEM223
TMEM179B
TLL2
REEP4
HR
RBM3
TSEN54
LLGL2
CASKIN2
APOLD1
CDKN1B
C16orf46
PHLDA2
ABCF3
NUMBL
RPS27A
CLHC1
TIMM13
EFNA2
PABPN1
PIDD1
SLC25A22
RPLP2
FBXO4
SIGMAR1
ARID3C
SSH3
GNB1
RRAD
CDH16
PEAK3
OAZ1
ZNF358
KRT8
KRT18
MCOLN1
CDC6
HSPB1
ZACN
SRP68
GALR2
MRPS34
EME2
NME3
IMPDH2
RPL6
COASY
MLX
SPDYE5
POM121C
THEM6
SFXN4
SLURP1
TMED4
DDX56
HSPE1-MOB4
HSPE1
HSPD1
TAF6
MBLAC1
CNPY4
ZNF35
SLC25A42
AJM1
ZFP36L2
NGRN
AEBP1
NDUFS3
KBTBD4
FAM180B
FNDC7
C1QTNF12
SDF2L1
SDF4
B3GALT6
PIRT
SIRT7
PCYT2
MAFG
KLHL11
CELF1
PATZ1
WDR90
MCRIP2
MATR3
POP5
TUBD1
RPS6KB1
C19orf25
TFAP2A
RGP1
MSMP
GBA2
BUD13
DRAP1
C11orf68
TTC33
DYNLL1
KLRC1
TARBP2
MAP3K12
C7orf26
NPFF
PPIL2
SLC25A5
SRSF2
MFSD11
METTL23
JMJD6
PITPNA
RAB1B
DNAJB4
JADE2
HNRNPDL
ENOPH1
LARP1
GADD45A
CEP192
DPH2
B4GALT2
ATP6V0B
KPNB1
CDKN1A
FBXO46
RAB44
SCML1
NECAB3
FNBP1
ZNF865
ZNF524
FIZ1
TRIM52
IRF2BP1
TSFM
CFAP410
SLC25A10
MRPL12
RPS5
EXOSC6
RNF225
WDR81
CITED4
SPEN
BAHCC1
TLCD2
NOP2
UBE2S
APOE
APOC1
ULK3
CDK5R1
RNF44
CDHR2
USP21
UFC1
PPOX
CASP6
NOL7
CHEK1
MTFR2
PNPLA2
BAG2
PNRC1
MRNIP
ZNF3
COPS6
RHOV
KCNJ14
GRWD1
MCM7
FUT8
ETS2
RRM1
CDC34
ADM2
NDUFS1
EEF1B2
MIOX
FSTL3
TEX45
ACOX3
MST1
RPS12
PLPP5
ARHGEF12
ACACB
KCNK7
CCAR2
C8orf58
SEC16A
C9orf163
WDR83OS
WDR83
MAN2B1
RPS23
ATP6AP1L
PPFIA4
PPP1R37
RPL19
CACNB1
ZNF251
USF2
RPL27
IFI35
RPUSD1
CHTF18
LZTS2
TTC16
PTRH1
CFAP157
TNNC2
THAP7