ChIP-Atlas: Target genes

Potential target genes for CPSF3

Query protein: CPSF3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5441334 | HeLa
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CPSF3's Target genes

◢ CPSF3: Average

◢ SRX8018228: 293

◢ SRX8018229: 293

◢ SRX8018230: 293

◢ SRX8018231: 293

◢ SRX10448664: HeLa

◢ SRX10448665: HeLa

◢ SRX10448666: HeLa

◢ SRX10448667: HeLa

◢ SRX5441330: HeLa

◢ SRX5441331: HeLa

◣ SRX5441334: HeLa

◢ SRX5441335: HeLa

◢ SRX9237243: K-562

◢ SRX9237244: K-562

◢ SRX9237245: K-562

◢ SRX9237246: K-562

◢ SRX8945051: U2OS

◢ SRX8945057: U2OS

◢ CPSF3: STRING

MAMDC2
ZNF335
RABL2A
MAPKAPK5
SRD5A1
NSUN2
NVL
RABL2B
NRIP1
RWDD1
TSN
MRPS7
MIF4GD
GGA3
DYNC1LI2
PPARA
ICE1
FADD
DUX4
TAOK3
SUDS3
NUP85
GOLM2
CAPRIN1
REXO1
S1PR4
NCLN
VTI1B
H4C14
H3C15
H3C14
H2AC19
H2AC18
PRDM10
MYC
CACTIN
H4C15
RBBP5
PSMD12
C19orf48
VDAC2
H4C12
H4C11
H2BC15
H2AC15
OAZ3
RPLP0
GCN1
IPO13
SEC61B
VEZF1
ZC3H10
RPL41
ESYT1
FAM187A
EFTUD2
CCDC103
POLR3F
DZANK1
RIT1
SHROOM2
EXOSC5
BCKDHA
HSPA9
UPF2
ZWILCH
SNAPC5
RPL4
VARS1
NDUFA4
NME6
HDGF
MRPL24
SKP1
PES1
OAT
EDC4
MTRNR2L8
COX7A2L
PI4KB
TM4SF1
H1-2
H3C3
HADHB
HADHA
SGK1
UBE2I
H4C3
H1-6
LYRM4
FARS2
C6orf226
EPN1
EEF1A1
H2BC5
H1-4
ELMO2
RPS11
RPL13A
ZRANB2
POLG2
DDX5
CEP95
SECISBP2
CKS2
ZNF576
IRGQ
SUCLG1
ACTR10
SLC35B1
MED1
CDK12
NFKBIL1
DDX39B
ATP6V1G2
NNAT
BLCAP
AXDND1
H2BC14
H2AC14
MRPS5
GRAMD2A
TLCD1
RPL23A
RAB34
NEK8
MRPL11
COX20
ATP6V0C
AMDHD2
PSMD1
STAM
CDC73
UCKL1
POLR2E
GPX4
NAT10
C6orf47
BAG6
APOM
MPDU1
LOC100996842
EIF4A1
CD68
COMMD1
CCT4
DCTN1
HNRNPA1
CBX5
NFE2
TTC8
SUMF2
GOSR2
SNX16
EIF4A2
USP1
NUDT1
MRM2
MAD1L1
RCC1
MTRNR2L1
SFI1
EIF4ENIF1
NRAS
MRM1
DHRS11
ATP5F1E
MRPL2
KLC4
CUL7
AKAP8
MTRNR2L2
MSH3
DHFR
H2BC4
H2AC6
RPL17-C18orf32
RPL17
C18orf32
VPS52
RPS18
B3GALT4
BICRA
PAK1IP1
C6orf52
WDR90
MCRIP2
HOXC8
HOXC4
HOXC6
DDIT4
TSNAX
NUP205
RPN1
PSMG2
CEP76
PCBP1
RABGGTB
SUPV3L1
ANAPC7
SPATC1L
DAPK3
IER3
FLOT1
PDAP1
BUD31
PPP1R10
MRPS18B
ATAT1
INPP5E
DNAJC21
RPL26
KRBA2
H4C2
H3C2
H2AC4
EAPP
SELENOF
HS2ST1
FAM104A
C17orf80
STAM2
TAF9
RAD17
AK6
FARSB
BAZ2A
ATP5F1B
GPAA1
EXOSC4
VPS28
SART3
ISCU
H4C8
ATP5MG
H2BC21
H2AC21
H2AC20
MSH4
FAM131A
EIF2S3
MRI1
C19orf53
GADD45GIP1
SLC50A1
EFNA1
DPM3
PAXBP1
FRG2C
RPL21
RNF166
CTU2
FTH1
BEST1
ARF3
FRG2
RAD23A
CALR
RPL22L1
ADK
AP3M1
WDR74
STX5
ZBTB37
NPM3
FGF8
TBCK
AIMP1
PNO1
TIMM13
MRPS16
DNAJC9
ANKFY1
PRRT2
MAZ
C5orf15
TBK1
CCDC97
HAX1
TUBB
MDC1
ERCC6L2
PROZ
HMCES
MAML1
CDH24
RPS2
RPL3L
RNF151
NDUFB10
RPL19
CACNB1
RRP36
MEA1
PTMA
MAT2A
RBM39
ECI1
DENND4B
TOB1
TM9SF1
IPO4
GAPDH
SYNRG
MAPK8IP3
COX18
H3C13
H2BC18
H4C13
H3C11
H2AC16
H1-5
GPSM1
DNLZ
CARD9
PHF23
GABARAP
DVL2
SCRIB
SRSF11
COASY
MLX
TUSC2
RASSF1
HYAL2
SLC35E3
RHOB
UBE2M
CHMP2A
PRDX2
JUNB
SLC3A2
CCDC200
LOC102724770
DGCR6
ARL4D
GH1
CSHL1
ART1
PGK1
H4C9
SYCE2
H2BC11
H2AC11
H2AZ1
DNAJB14
MUC3A
SYNGAP1
PHF1
CUTA
COL23A1
TMEM242
GNG14
DHPS
ZNF34
RPL8
NDUFAF3
DALRD3
ID3
CIRBP
PAGR1
H4C1
FAM174C
PACSIN3
ARFGAP2
SMIM14
CHD2
H4-16
H2AJ
PTPN6
C12orf57
ATN1
IFITM3
IFITM1
H3C1
H1-1
CTDSP1
H2BC12
H2AC12
MVP
HMGB1
IFITM2
ABTB1
RHBDL1
JMJD7-PLA2G4B
JMJD7
ZNF581
ZNF580
CCDC106
POLR2J3
PRKAG1
TSSK4
PHRF1
WDR24
STUB1
JMJD8
STX10
RNASEK
IER2
GGA2
SOX15
HES7
ALOXE3
SLC38A2
C17orf49
BCL6B
PFDN5
MYG1
USP29
CXorf38
MSH5
MPIG6B
LY6G6C
DDAH2
CLIC1
SCAMP3
FAM189B
GADD45B
RPL27A
RPS27A
CLHC1
P4HB
IER5L
SIRT7
PCYT2
MAFG
NAA10
ARHGAP4
RPS23
ATP6AP1L
PRKRIP1
ADM
KMT5B
MOGS
WDR37
IDI1
SLC39A7
RXRB
RING1
HSD17B8
DPH7
ARHGDIA
TMEM107
NADSYN1
DHCR7
SHC1
PYGO2
PBXIP1
LOC101928120
RABL6
CCDC183
RELA
TMSB4X
MRPL40
HIRA
GPN2
H4C6
RPL13
ZNF653
ZBTB45
WDR6
PDE4A
MRPL53
TRIM8
SLC27A5
FAM228B
CPNE7
RPL35A
LMLN
IQCG
TP53I3
SF3B6
POMZP3
CDK11B
CDK11A
UGT1A4
UGT1A3
CCDC34
SNAP47
JMJD4
FLOT2
DHRS13
IRF2BP2
H4C5
H3C4
H2BC7
H2AC7
EPN2
TMEM230
PCNA
KMT2A
NOP53
E2F3
VAMP2
H3C6
PTGES2
SH3BGRL3
DONSON
FLYWCH1
HMBS
TMEM132A
ZNF285
MMP24OS
MMP24-AS1-EDEM2
EIF6
ZFP36L1
GET4
FUT11
CHCHD1
BTNL9
EFNA2
ZNF446
ZNF324
NDST2
H4C7
H3C7
H2BC9
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
MOV10
PEAK3
OAZ1
PSMG1
ZNF276
VPS9D1
MID1IP1
H3C12
H2BC17
H2AC17
ZNF628
NAT14
DPAGT1
CCDC24
H2AX
H4C4
C5orf24
SSC5D
TOM1
GPANK1
CSNK2B
MT2A
SIT1
CCDC107
ARHGEF39
SLC25A11
RNF167
PFN1
ENO3
BRWD1
GTF2A2
STPG3
NANOS1
FAM166A
PIN4
SLC25A10
MRPL12
SIX5
DMPK
RPL12
LRSAM1
PDHX
APIP
HMGN2
NOLC1
HSPA1B
ADGRA1
LOC105372440
ACP4
ACTL10
TMSB10
IKBKG
G6PD
FTL
WDR46
RGL2
PFDN6
ID1
ZNF48
DYRK1B
NECAB3
CAPNS1
INTS5
GANAB
RPS5
RPS28
NDUFA7
H2BC8
H2AC8
KIF2C
RECQL4
LRRC14
VPREB1
TRIM37
LRRC24
C8orf82
STAG1
DEFA5
ARHGAP39
CD79A
ZFX
SETD1A
ORAI3
ARHGEF1
CYRIB
WBP1
INO80B
AVPI1
IGF2BP3
VWA7
H3C10
H2BC13
H2AC13
PCBD2
RPS29
SURF6
CDK16
NXF1
CISD3
THAP9
SEC31A
SCFD1
RCOR3
MDP1
CHMP4A
TAF10
RRP8
ILK
EXOSC6
VARS2
GTF2H4
TPP1
TUBGCP6
HDAC10
PIP4K2B
PNMA1
TNFRSF12A
THOC6
HCFC1R1
CLDN6
PHLDA1
ZNF513
SLC39A4
TRIM65
NOP14
GRK4
RPL10
CCDC138
RPL3
PDCD2L
GMPPB
AMIGO3
RPL37
FOSL1
FIBP
CCDC85B
MAN2C1
TEDC2
DRAP1
C11orf68
GOLGA5
UQCC3
LBHD1
PCBP4
ABHD14B
ABHD14A-ACY1
ABHD14A
FBF1
ZNF771
UBC
SELENOH
MRPL38
CSKMT
C11orf98
RPL35
ARPC5L
CD320
NELFB
POLD1
NR1H2
HAGHL
CCDC78
ANTKMT
RCE1
SPHK2
RXYLT1
NKIRAS1
TMED1
GSTO2
SPACA4
RPL18
FAM83E
UNK
H3-3B
CEBPB
XRN1
TARBP2
MAP3K12
MRPL28
CDC42EP1
MRTO4
EMC1
LDHC
DNASE1L1
EIF1
RPS15A
MRPS34
EME2
SPOUT1
RHOT2
SMC2
KLHL11
FADS2
FADS1
TSEN54
LLGL2
MTA2
SNAPC4
BAG2
UBTF
NOP56
SNX14
TMEM223
TMEM179B
SNX17
EIF2B4
METRN
STYX
NME3
MT1M
MT1E
MAPKBP1
PIP5KL1
DPM2
TUT1
SP3
UPF3A
TUBB4B
NAPRT
MROH6
YJU2
ZGLP1
TSC22D1
FDX2
IMPDH2
H3-3A
ALLC
MAF1
C7orf26
PWP2
LOC102724159
LAMP1
CASKIN2
HPDL
P2RY11
EIF3G
INPP5K
WDR38
TYMP
SCO2
ODF3B
CELF1
MLLT6
TFAP2A
BTBD18
GLRX2
CYB561D1
UXT
ELK1
MATR3
WDR97
DPH6
WDR45
PRAF2
OGFOD2
ARL6IP4
TTC33
MST1
GATD3B
GATD3A
RPS12
GAS2L1
FNBP1
ROPN1L
PPAN-P2RY11
PPAN
ULK3
OR6B2
NDUFA10
CDKN1C
PRELID3B
SRSF4
LMNB1
SNX9
RBM4
LRRC6
RILP
TRIP6
SRRT
CTNNAL1
PROCA1
USP21
UFC1
TOP1MT
PPOX
RPL7
RDH10
TOB2
GTF3C4
DDX31
HOXA3
MUC1
NDUFS3
KBTBD4
FAM180B
THOC5
IDH3B
RNF225
ZNF35
LARP1
ZBTB26
RABGAP1
DUSP2
ASTL
ZNRD2
FAM89B
EHBP1L1
MARCHF6
VPS4A
TRABD
ARID5B
SLC39A1
CRTC2
CREB3L4
GPS2
EIF5A
IGF1R
TTYH2
RPL38
PABPN1
ICA1L
RBKS
BABAM2
AGO3
DENR
TMEM109
SLC35A2
PIM2
ZBTB12
EHMT2
C2
KIF27
DYNLL1
ABCB6
ANAPC4
ISL2
SLC25A39
NAA80
IFRD2
HYAL3
WDR81
RAB40C
BCAP29
ATXN2
RPL6
TAOK2
TUBA1B
CITED4
TSC1
PYCR3
GFI1B
NFKBIA
GAGE2A
ABHD17A
UBB
CENPA
URGCP
POLR2C
SAR1A
PIDD1
ZNF865
ZNF524
NME4
FIZ1
DECR2
LY6L
GFAP
PHOX2A
CNPY2
TRIM41
TIGD5
RPL15
PATZ1
EEF1D
APOLD1
NOXO1
MEMO1
SYF2
RGS19
OPRL1
LKAAEAR1
URGCP-MRPS24
ABCF3
CALM2
GMEB2
ENAH
TSKU
DRD4
SLC12A6
NUTM1
NOP10
SPEN
CDKN1B
FAM210B
C16orf46
FSTL3
ZCWPW1
PPP1R35
MEPCE
ATF4
RPEL1
PPFIA4
SLC35B2
HSP90AB1
SRCAP
LOC730183
SFN
ST3GAL3
LRP6
ADNP
SPDYE5
POM121C
ZBTB22
TAPBP
SLC25A22
LGALS2
DAXX
PACS1
MFSD3
ZNHIT2
TM7SF2
MRPL49
H2BU1
H2AW
FAU
MYL6B
MYL6
HNRNPU
SAMD1
C19orf67
TMPPE
GLB1
PNRC1
PROSER1
NHLRC3
PPP1R37
HMGA1
TXNIP
PCF11
PRMT3
LRRC37A3
GAMT
BRF2
GAGE2B
CASP6
SFT2D3
USP34
LENG9
GTF2IRD2B
GTF2IRD2
SLC25A42
CAMK2N2
TCTEX1D2
ATXN7L2
SEC14L1
SMIM22
ROGDI
H3C8
H2BC10
TLL2
CELSR3
NUDT4B
NUDT4
GFER
PGP
CENPVL3
RACK1
ROMO1
CRK
PPP3CB
TIGD3
THEM6
CSNK1G1
CSRNP2
CACFD1
CRELD1
PLPP5
LY6G5B
RABGEF1
C19orf71