ChIP-Atlas: Target genes

Potential target genes for CPSF3

Query protein: CPSF3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX8018230 | 293
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
CPSF3's Target genes

◢ CPSF3: Average

◢ SRX8018228: 293

◢ SRX8018229: 293

◣ SRX8018230: 293

◢ SRX8018231: 293

◢ SRX10448664: HeLa

◢ SRX10448665: HeLa

◢ SRX10448666: HeLa

◢ SRX10448667: HeLa

◢ SRX5441330: HeLa

◢ SRX5441331: HeLa

◢ SRX5441334: HeLa

◢ SRX5441335: HeLa

◢ SRX9237243: K-562

◢ SRX9237244: K-562

◢ SRX9237245: K-562

◢ SRX9237246: K-562

◢ SRX8945051: U2OS

◢ SRX8945057: U2OS

◢ CPSF3: STRING

H4C14
H3C15
H3C14
H2AC19
H2AC18
H4C15
DUX4
POLR2J3
H2AZ1
DNAJB14
FRG2C
COL23A1
CIRBP
FAM174C
EFNA2
KMT2A
ENAH
MORC3
VPS52
RPS18
B3GALT4
TLCD1
RPL23A
RAB34
NEK8
H2BC21
H2AC21
H2AC20
H3-3A
IRF2BP2
WDR37
IDI1
RRP36
MEA1
CTDSP1
GH1
CSHL1
ZC3H10
RPL41
ESYT1
H2BC5
H1-4
SCRIB
ATP6V0C
AMDHD2
MORF4L1
VEZF1
RCOR3
ZNF34
RPL8
H4C9
H2BC11
H2AC11
EGLN1
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
H4C2
H3C2
H2AC4
H4C1
KLF12
COX20
C6orf226
SECISBP2
CKS2
KIF27
CTNNB1
MAMDC2
TARS3
RANBP6
KIAA2026
PPP3CB
HNRNPU
RHBDL1
WDR24
STUB1
JMJD8
PIP4K2B
VPS28
PRRC2B
CHD2
H1-2
H3C3
DESI2
ABL2
POGZ
PYCR2
TRAPPC8
MMP24OS
MMP24-AS1-EDEM2
EIF6
AKT3
TMEM230
PCNA
HMGN1
RNASEK
C17orf49
BCL6B
ACTL10
NECAB3
MUC1
HMGN2
FBXL3
PRSS27
ZWILCH
SNAPC5
RPL4
NUDT4B
NUDT4
LMBR1
EPN1
H3C1
H1-1
ZBTB2
SYNRG
H4C12
H4C11
H2BC14
H2AC14
TBC1D13
SRSF11
MEMO1
ZNF276
VPS9D1
RAB4A
ZNF398
SETD5
FAM118A
IBA57
GATAD2B
POLG2
DDX5
CEP95
H3C13
H2BC18
HIPK1
TNRC18
LOC100129484
ADARB1
PARP1
DEDD
AGK
ZNF581
ZNF580
CCDC106
TPTEP2-CSNK1E
NCOA7
RPS5
ZNF513
SNX17
EIF2B4
GTPBP3
ANO8
H4C3
H1-6
PPP1CC
EYA4
EDC4
NOXA1
KMT2C
UBP1
CLK3
CUL1
NFKBIA
PCDH9
FRG2
QSOX1
PANK3
CYB561D1
ATXN7L2
ID2
MAP3K21
EZH2
BRWD1
AKAP8
EIF2D
ZFAND6
AP2S1
ARHGAP35
AKT2
SUPT4H1
ZBTB26
RABGAP1
HNRNPF
CDC42BPA
C15orf39
FAM177A1
ZBTB20
YBX1
MRPS16
DNAJC9
RAD54L
RRNAD1
ISG20L2
CTNNA1
DRAP1
C11orf68
PDE4DIP
TTC5
ACBD3
RUFY2
SP3
TFAP4
PDCD2
HSPG2
TAF10
RRP8
ILK
TPP1
BHLHA9
BRAF
SP1
SVBP
ERMAP
FNBP1
MAN2C1
HYI
SPIN1
SSX2IP
MAP3K2
HECTD1
EDARADD
RAVER2
DYRK1B
H2BC12
H2AC12
CMTM7
SLC25A10
MRPL12
NUB1
B3GALNT2
STAU1
ULK3
GDPGP1
CIB1
RPL17-C18orf32
RPL17
C18orf32
FPGS
MSL3
PHF23
GABARAP
DVL2
DPY19L4
TFAP2A
OTUD7B
VANGL2
PCBD2
SMIM19
SLC20A2
CCSAP
NAXE
GPATCH4
NUCKS1
ZNF768
ZNF747
USP21
UFC1
PPOX
DPH7
RRM2
MKRN1
RNF11
COMMD3-BMI1
COMMD3
BMI1
JAK1
ARHGEF11
PRRT2
MAZ
PAGR1
MVP
SLC25A53
FAM199X
CCDC200
STMP1
SKIDA1
MLLT10
CCDC88A
TGDS
GPR180
ASH1L
ITGB3BP
EFCAB7
LEKR1
ESR2
DSG2
NCAM2
FBXO11
MRPL2
KLC4
CUL7
DONSON
NKIRAS1
DDX59
NR1D2
UBE2D2
TRABD
SCAMP3
FAM189B
ZNF48
OPN3
CHML
HIVEP1
EPHX1
CIZ1
AGO3
ARID3B
KANSL1L
RASA4B
EFCAB2
UBE2J2
SCNN1D
CATSPERE
ADSS2
ZMYM4
NOTCH1
LUC7L2
KANSL1
THAP11
NUTF2
CENPT
MSX2
SPOPL
SRCAP
LOC730183
RAD9A
PPP1CA
SMYD2
MCL1
TBC1D10C
UBE2M
CHMP2A
NR2C2
PHACTR2
SATB1
ATP11B
NFAT5
SMARCD2
UBA3
ARL6IP5
GALNT11
ZBTB18
URB2
TAF5L
REPIN1
GPAA1
EXOSC4
CDC42EP4
SNX11
CBX1
NCOA2
WIZ
PABPN1
HDHD5
ADNP
ZNF341
USP39
TMEM150A
RNF181
C2orf68
KMT5B
TP53BP2
CHD1L
PRKAB2
PEX7
ITGB1
PRKAG2
NPIPB9
SUMF2
H4C5
H3C4
H2BC7
H2AC7
H4C4
SLC22A23
ANKRD50
CLCN5
KDM3B
REV3L
STC2
H3C10
H2BC13
H2AC13
EIF3L
ANKRD54
SLAIN1
BACH1
SPRY2
PRPF40B
NT5C2
PEAK3
OAZ1
THAP9
SEC31A
RAD54L2
USF3
SCRN1
PHF19
WDR48
SCN11A
RWDD3
LRRC37A3
CHAF1B
MKRN2OS
MKRN2
MSI2
ZNF70
VPREB3
ATXN2
USP12
UNC5A
TATDN2
C7orf26
LPGAT1
THAP12
GVQW3
ANKRD36C
HOXA3
PACS1
UGT1A4
UGT1A3
EPS15
CASC3
ATXN7
KCNIP2
DISC1
TBXAS1
HIPK2
PHYKPL
TLK1
SYT14
SAMD1
C19orf67
MTF2
ZNF862
LRRFIP2
DNAJC6
SOD2
ANP32B
PPP4R2
ZNF445
THRB
SLC35D1
DHX9
TACC1
NRAS
HSPE1-MOB4
HSPE1
HSPD1
C21orf91
ZNF213
ZBTB37
DENND4B
ARL4D
UBA2
TIGD1
EIF4E2
JAGN1
GAREM1
ZNF397
MRPL40
HIRA
AP1S2
TMEM68
TGS1
UFSP1
ACHE
DBN1
ABCB10
GPC4
INPP5E
GLRX2
TXLNA
FAM53C
CDC25C
H1-7
DIDO1
GCLC
ATXN2L
LPAR3
NAA10
ARHGAP4
RBX1
H2BC15
H2AC15
BMP2K
ANKRD28
TRAM2
RILPL1
MIER1
DNAI4
TUBB2A
RBBP8
STX18
PBX3
DSTYK
KCNN1
HPRT1
DENND2B
TRDMT1
C18orf21
FNDC3A
SDCCAG8
CEP170
SULT1B1
PPFIA4
DNAJB12
EPM2A
SLC27A4
B4GALT6
TRIM24
DYNLL2
NPIPB6
PHF21B
PTMA
RPEL1
USP34
PLPPR3
ACBD6
DEGS1
MPP5
SESN1
MIB1
LAMC1
HMGB1
POMZP3
STAG1
PRR7
NBPF15
ZNF652
KEAP1
B4GALT1
PHIP
NBPF1
PIAS1
FHOD3
C15orf61
HECTD4
PIK3R1
SNAP47
JMJD4
KANSL3
FER1L5
TGIF2-RAB5IF
TGIF2
MPC2
DCAF6
CMTM3
APBB2
TM2D3
DNAJC25-GNG10
DNAJC25
ZMYND11
CDC42
STARD4
GREB1L
SETD6
ZNF76
RNF220
SRRM3
CYREN
PHC1
H2AZ2
TLN1
CREB3
BCAP29
PURA
INTS9
HMBOX1
UBE2V1
MAX
RPLP0
GCN1
N4BP3
PITRM1
PFN2
MID2
KCNB2
PRKRA
PJVK
ZBTB17
FAH
RAD23A
CALR
PNRC1
LATS1
UBE2Z
EXOC2
ARHGAP10
UNK
H3-3B
IGF1R
GALNT2
RFK
SQSTM1
MGAT4B
NOTCH2
SGPL1
PKP4
CCDC148
TCAF1
ERICH2
PACSIN3
ARFGAP2
ARHGEF12
H2BC6
MYBL1
ZBTB6
RC3H2
PXK
NEU1
PSEN2
TPGS2
ZBTB44
RPL26
KRBA2
SLC39A4
SRSF4
CPSF1
ZNF740
CSAD
ZNF865
ZNF524
FIZ1
RFX1
ERMARD
BTBD1
CD276
IQSEC1
RCN2
PSTK
DYNC1LI2
SMIM13
PCBP2
ZBTB38
CAPN7
RBM15
PAFAH1B2
WDR17
HOXB9
DDHD1
C19orf48
LOC105372440
ACP4
ZFYVE9
RALB
BPTF
SERTAD2
ARL8B
RNF138
WRNIP1
MYLK4
STON2
PGBD5
ADPGK
DTD1
E2F3
COG2
SBF2
ATF1
ATXN7L3
AFAP1
TAB2
SPACA6
LMO7
ZNF697
IMPACT
RYR2
TSC1
GFI1B
ANKRD18B
TARBP1
PEX3
ADAT2
DSP
CREBRF
SRD5A3
FBXO30
TBC1D5
NOVA1
SOWAHC
SEPTIN10
BHLHE40
TRIM3
TIMM10B
SPTAN1
FOXD3
PTPN14
RALGAPA1
ZNF207
C17orf75
DNAH14
STUM
JUP
CRIM1
SYNCRIP
FNBP1L
PLD4
THEM4
KMT2E
TGM1
RABGGTA
PTPN4
RASA4
EBAG9
HLCS
SLC2A11
GPRIN1
HOXD9
HOXD8
BPHL
TMEM132A
KAT6A
RNF38
GPBP1
MNX1
STRN
ZMAT1
PTPRU
PHF10
PRRC2A
AIF1
POLR3GL
LIX1L
FAXDC2
CNOT8
ANKRD34A
SS18L2
SEC22C
NKTR
IQGAP1
ATP1B1
PAQR3
TLE1
DCAF1
FAM131A
NME4
DECR2
FAM207A
CLN5
SRR
SMG6
SDC4
CRTAP
DYNC1LI1
FBXL4
TMEM223
TMEM179B
SRF
POLG
EPB41
RANBP17
CNIH1
CCDC92B
UBE2N
ROM1
EML3
B3GAT3
PARP16
TRIM44
FAM3C
CDC73
ARSG
ASPSCR1
ERO1A
SLC16A6
DDX23
CNTNAP1
CCR10
RXYLT1
TMED9
B4GALT7
CDK13
RNF139
LSS
NEK7
YPEL1
LHX4
GET4
TSPAN10
NPLOC4
PATJ
RBM26
RNF135
PRKCQ
CEP68
KCNH1
ZKSCAN2
NEMP2
SMARCB1
SLC5A6
CAD
ATRAID
GATA2
OTX1
INSIG1
LRIG2
TTC21B
SLC17A5
DCBLD1
SRXN1
FN1
USP33
UTRN
RMND1
ARMT1
RUVBL1
EEFSEC
GAA
TAOK1
LHX9
C1orf53
MSRB2
HDLBP
VDAC3
RMDN2
CSRNP2
ATF3
MAPK11
GOLGA1
PTEN
KLLN
SLC44A1
DGKH
ZNF644
BRPF1
UBE2L3
RIMBP3C
RIMBP3B
TRIM65
MRPL38
VPS4A
KRAS
ACTN2
SLC44A3
MAP2K7
CEP85L
FZD1
ID3
RPL6
ARSB
PTPN11
FBXW2
CDC5L
ANKRD36
PAFAH1B1
GOLGA6L10
KLHL25
PLEKHF2
SENP8
MYO9A
SUSD5
H2BC4
H2AC6
WDR27
C6orf120
COA6
MTHFS
OAT
XYLB
HES1
PHGDH
UIMC1
RMC1
LYST
RASAL2
RAPH1
LRRC8A
KYAT1
MECP2
OSBPL6
RBSN
MAPK8IP3
PNMA1
TYMP
SCO2
ODF3B
NCBP3
DNAJB2
AKAP13
LARP4B
BRPF3
CHRNA5
C3orf80
KLF9
LCN12
FBXW5
C8G
TTC23
LRRC28
CPOX
CLASP2
RAB43
KAT8
BCKDK
CCDC38
AMDHD1
ING5
COX5A
SPTSSA
TBC1D14
AHCYL1
EIF4G1
COL6A1
RPL27A
LBR
TMEM250
SLC6A9
GTF2H2
NT5DC1
ZC3H4
ZNF609
TTLL11
CXADR
LMNB1
NOL7
EDEM1
ACADM
GOLGA6L4
LRP11
PSG5
SURF6
AK1
ZBTB10
DOCK7
PDE6D
COPS7B
HOOK1
ATP2A2
SSBP2
ACVR1C
PGBD1
MAIP1
RCBTB1
PYGL
EAPP
POGLUT3
MACROD1
RNF214
PCSK7
DTX2
ABI2
RGMA
RCOR2
IGSF3
MMAA
TMCC1
SHC1
PYGO2
PBXIP1
LOC101928120
COMT
TXNRD2
PKM
HNRNPA3
SCAF8
KCNF1
DUSP14
JARID2
CDC7
YPEL3
TBX6
GNB2
TTYH2
RPL38
H2BU1
H2AW
ASXL1
NPTN
ACTR1B
LYPLA1
SLC48A1
GPX1
OVCA2
UAP1L1
MAN1B1
FOXP1
METTL9
MLLT1
ARRDC3
KIAA1522
TASOR2
STK40
PSKH1
NRN1L
SAPCD2
RCAN3
KIF13A
ROCK2
TVP23B
FGGY
SYNE2
GMNN
SIRT7
PCYT2
MAFG
NOXO1
GFER