ChIP-Atlas: Target genes

Potential target genes for CPSF3

Query protein: CPSF3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX8018228 | 293
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
CPSF3's Target genes

◢ CPSF3: Average

◣ SRX8018228: 293

◢ SRX8018229: 293

◢ SRX8018230: 293

◢ SRX8018231: 293

◢ SRX10448664: HeLa

◢ SRX10448665: HeLa

◢ SRX10448666: HeLa

◢ SRX10448667: HeLa

◢ SRX5441330: HeLa

◢ SRX5441331: HeLa

◢ SRX5441334: HeLa

◢ SRX5441335: HeLa

◢ SRX9237243: K-562

◢ SRX9237244: K-562

◢ SRX9237245: K-562

◢ SRX9237246: K-562

◢ SRX8945051: U2OS

◢ SRX8945057: U2OS

◢ CPSF3: STRING

H4C14
H3C15
H3C14
H2AC19
H2AC18
H4C15
COX20
VPS28
VEZF1
DUX4
H2AZ1
DNAJB14
CTDSP1
VPS52
RPS18
B3GALT4
ZC3H10
RPL41
ESYT1
RRP36
MEA1
WDR37
IDI1
FRG2C
SYNRG
CIRBP
FAM174C
EFNA2
GH1
CSHL1
RABL6
CCDC183
COL23A1
ACTL10
NECAB3
POLR2J3
SCRIB
ZNF276
VPS9D1
EDC4
ZNF34
RPL8
KMT2A
POLG2
DDX5
CEP95
ZNF581
ZNF580
CCDC106
DONSON
THAP9
SEC31A
TLCD1
RPL23A
RAB34
NEK8
PHF23
GABARAP
DVL2
INPP5E
RHBDL1
WDR24
STUB1
JMJD8
ID2
EPN1
SNAP47
JMJD4
H3-3A
PRRT2
MAZ
PAGR1
DPH7
UBE2M
CHMP2A
RNASEK
C17orf49
BCL6B
MRPL2
KLC4
CUL7
MUC1
TARS3
ZWILCH
SNAPC5
RPL4
ENAH
IRF2BP2
PCDH9
OTUD7B
FRG2
MVP
BTNL9
PIP4K2B
TMEM132A
HYI
NUMBL
C19orf48
LOC105372440
ACP4
ZNF862
MMP24OS
MMP24-AS1-EDEM2
EIF6
NANOS1
NUDT4B
NUDT4
NRAS
GPAA1
EXOSC4
MAMDC2
MRPS16
DNAJC9
ZNF513
SNX17
EIF2B4
ADNP
RIT1
AKAP8
GGA2
EIF3L
ANKRD54
H2BC5
H1-4
ADARB1
ULK3
DYRK1B
TMEM230
PCNA
ATP6V0C
AMDHD2
ABTB1
ZNF653
CABYR
HNRNPU
BCAP29
SETD1A
ORAI3
SUMF2
RPL17-C18orf32
RPL17
C18orf32
MEMO1
RPLP0
GCN1
NAXE
GPATCH4
PCNX2
MTHFS
RAB4A
MTRF1L
H2BC21
H2AC21
H2AC20
MAN2C1
HIPK1
RACK1
RPS5
CTNNAL1
NAA10
ARHGAP4
CHAF1B
SECISBP2
CKS2
DLG4
ACADVL
FNBP1
RAD54L
CHD2
TAF10
RRP8
ILK
TPP1
RRM2
RCOR3
ID3
SDCCAG8
CEP170
SHC1
PYGO2
PBXIP1
LOC101928120
ZNF865
ZNF524
FIZ1
CXorf38
ST3GAL3
MPDU1
LOC100996842
EIF4A1
CD68
SH3BGRL3
PRR7
ARL4D
FOXP1
MAML1
COMMD3-BMI1
COMMD3
BMI1
SLC25A10
MRPL12
CCDC138
STIMATE-MUSTN1
STIMATE
KCTD5
H3C13
H2BC18
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
TOM1
SLC25A53
FAM199X
AKAP5
POGZ
WDR48
SCN11A
DENND4B
CASP6
MORF4L1
AKT3
LMBR1
FBXL3
ATP5F1E
PRELID3B
PPP3CB
KLF9
ECI1
PRRC2A
AIF1
TYMP
SCO2
ODF3B
MRM1
DHRS11
TRIM8
MORC3
SYCE2
MRPL40
HIRA
VANGL2
SMIM19
SLC20A2
KIF27
HDHD5
RUFY2
NCOA7
LAMTOR3
SEC61A2
PABPN1
SRSF11
PPFIA4
ZFAND6
TGDS
GPR180
KLF12
RPL26
KRBA2
ZNF398
GPS2
EIF5A
C7orf26
GTF2IRD2B
GTF2IRD2
PCBP4
ABHD14B
ABHD14A-ACY1
ABHD14A
AGK
MAPK8IP3
EXOSC6
C6orf226
DPY19L4
ADCK2
TGM1
RABGGTA
SIMC1
CACFD1
NCAM2
FAM76A
SPATA1
GNG5
IL10RB
SLC25A42
LATS1
PHIP
ZNF207
C17orf75
STC2
PEX7
RNF139
RPEL1
PANK3
PEAK3
OAZ1
CYB561D1
HOXA3
LRRC37A3
ATXN7L2
HOXA4
ZBTB26
RABGAP1
HMGN2
RBM26
FAM219B
ZNF326
CLCN5
SCAI
NBPF1
KDM3B
AGO3
PRRC2B
EDEM1
SYNGAP1
PHF1
CUTA
FLOT2
DHRS13
KAT6A
ACBD6
FAM131A
POMZP3
SMYD2
TBK1
REV3L
TIMM13
PIDD1
SLC25A22
PHF19
CEND1
ZFP37
FSTL3
STRIP1
KANSL1
LSS
AP2S1
ARHGAP35
EPB41
GPX1
B3GALNT2
OPN3
CHML
MACROD1
SLC44A5
H4C2
H3C2
H2AC4
H4C1
TM2D3
DERA
ATXN7
KANSL3
FER1L5
H4C9
H2BC11
H2AC11
SOD2
ACBD3
FAM177A1
RPS6KB2
CARNS1
H1-2
H3C3
CELF1
DESI2
POMT1
UBXN2A
ZNF197
TADA1
USP21
UFC1
PPOX
EGLN1
MRPS34
EME2
NME3
CLK3
SPSB3
CCDC38
AMDHD1
POLR2C
PDCD2
CNIH4
NDUFB2
ZNF445
GATA2
PACS1
DAPK3
BOLA3
TEX38
ATPAF1
CYB5R1
ADIPOR1
AKT2
HFM1
H4C5
H3C4
H2BC7
H2AC7
SLAIN1
TMEM223
TMEM179B
RPL7
RDH10
PHACTR2
ADAM17
SCAMP3
FAM189B
RMI2
PPP1R10
MRPS18B
ATAT1
SKIDA1
MLLT10
MSI2
CD320
STMP1
ARHGEF11
PPP4R2
EPM2A
YBEY
MCM3AP
BACH1
NEU1
UGT1A4
UGT1A3
TRIM65
MRPL38
PLPP5
NOXA1
NEIL1
NUP93
NRN1
TUBGCP6
HDAC10
KIAA1522
MAPK12
KMT5B
ZNF148
CCZ1B
NDST2
MAPK11
NUB1
ABL2
UCKL1
TRIM3
TIMM10B
BRAF
LRRC24
C8orf82
TMEM35B
RHOU
RPL27A
MLLT6
EFCAB2
PXK
FUT11
CHCHD1
TP53BP2
FARP2
C8orf76
WIZ
FBXO28
PRKAG1
DDX59
PPP2R5D
PEX6
RPS27A
CLHC1
SS18L2
SEC22C
NKTR
C1orf21
PYCR2
INTS9
HMBOX1
PIN4
ABHD17A
IKZF4
ZBED6CL
LRRC61
ACTR3C
GOLGA1
CLN5
OCRL
FOSL2
FBF1
UNC119
TBC1D5
DENND2B
TTC21A
GORASP1
KCNJ4
VARS1
ACADM
SSRP1
P2RX3
TOMM20L
C5orf24
ZNF48
NFAT5
TBC1D10B
MYLPF
SUPT4H1
LIN9
CCDC200
E2F3
PWP2
LOC102724159
TPTEP2-CSNK1E
WDR27
C6orf120
MIER1
DNAI4
POLR3GL
LIX1L
ANKRD34A
SRSF4
GDI1
FAM50A
ATP6AP1
PRKAG2
GGPS1
ARID4B
TPK1
PACSIN3
ARFGAP2
TMED9
B4GALT7
DISC1
ARL5A
TSPAN10
NPLOC4
RNF220
TMEM184B
LRRFIP2
RAD23A
CALR
BAG2
KHDRBS1
CISD3
GAGE2A
CAMTA1
ZNF786
GAGE12H
GAGE12E
GAGE12D
GAGE12C
PGP
E4F1
FAM20B
TIRAP
SATB1
TPGS2
DNAH14
TRAPPC8
MAN1A2
TFAP2A
PATJ
MARCHF7
COX5A
WDTC1
MOV10
PARP1
H4C3
H1-6
FAM118A
DNAJC25-GNG10
DNAJC25
KMT2C
CZIB
AP1S2
RAP2C
ZNF621
RNF4
NDUFAF3
DALRD3
IMPDH2
JAK1
VPS36
CKAP2
TNFRSF6B
MRI1
C19orf53
SLC35E3
ICA1L
MYBL2
LMO7
KCTD3
NADSYN1
DHCR7
GPR137
ZNF341
GTPBP3
ANO8
GATAD2B
EXOG
TICRR
PDE6D
COPS7B
CMTM6
ZNF35
ROM1
EML3
B3GAT3
TRAF4
MKRN1
SMARCD2
MPC2
DCAF6
BTBD1
HNRNPF
MAP3K2
MPP5
REEP2
RECQL4
LRRC14
URB2
TAF5L
GET4
SRCAP
LOC730183
ZNF76
TMUB1
FASTK
AGAP3
GAB2
SIRT7
PCYT2
MAFG
ZNF771
ERLIN1
RAD54L2
SP1
TASOR2
PHC2
EYA4
CDC42BPA
NF2
SLC37A3
RAB19
RILP
ARID3B
THRB
NCR3LG1
SNX5
MGME1
TMA7
CCDC51
ATRIP
HEBP2
AMMECR1L
PRKRIP1
SP3
ZNHIT2
TM7SF2
MRPL49
FAU
TBXAS1
HIPK2
GOLGA6L10
CAPZA2
SPDYE5
POM121C
PURA
NUDT16L1
TXLNA
ACAT2
LRRC37B
YWHAZ
ZNF77
TIGD3
SEMA3B
PITPNM2
PAM16
PSMA4
DET1
GTF2I
CAPN7
CCSER2
MRPL28
CCSAP
MAT2B
PPIL2
HGSNAT
DNAJC11
CCDC130
SQSTM1
MGAT4B
FOCAD
TAOK2
RABIF
ARHGEF12
PPP1CC
EZH2
INTS5
GANAB
SETD6
UBA2
CUL1
DOCK7
NID1
BRWD1
PIP5KL1
DPM2
DRD4
TLL2
MTARC1
DSG2
CD276
SETMAR
CSTB
NAT10
NCKIPSD
NOTCH2
TBC1D4
ZBTB37
TSEN54
LLGL2
CASKIN2
STAU1
PUM2
GPC4
PCBD2
UQCC3
LBHD1
CSKMT
C11orf98
KANSL1L
SAMD1
C19orf67
THAP3
DBN1
STK40
SPECC1L
URGCP
URGCP-MRPS24
RANBP6
KIAA2026
YIPF3
POLR1C
LRRC73
CHUK
ZNF706
GCLC
XYLB
UBA3
ARL6IP5
IQGAP1
RPS11
OVCA2
RNASE10
TTC13
ARV1
KIF23
GMPPB
AMIGO3
IAH1
SEMA4B
FBXW2
KLHL25
WEE2
DENND11
PLPPR3
TFAP4
IBA57
ZBTB6
RC3H2
FYN
TTC5
ATXN10
MSX2
CD2AP
ATF3
MSRB2
CACNA2D3
GPN2
NUDT1
MRM2
MAD1L1
NOXO1
GFER
SYNGR3
UNC119B
NUBP2
STX6
ELOA
CIZ1
ANKRD36B
DHX9
PHGDH
DNM1
MAPK8IP2
PTCH1
FAM207A
FAM149B1
ECD
PBRM1
GNL3
LPGAT1
SUMO2
SIT1
CCDC107
ARHGEF39
RPL6
RIPK1
AQP11
FPGS
PTPN11
GALNT2
PDE8A
NUAK1
USP6NL
EIF3C
EIF3CL
SCFD1
TMEM250
USF2
FBXO10
NMD3
VWA7
PAFAH1B1
GOLGA6L4
XPO5
POLH
TMPPE
GLB1
RUVBL1
EEFSEC
MFSD14A
SELENOK
ACTR8
UTP4
DERPC
CHTF8
YBX1
MIB1
HDLBP
SEPTIN2
STX7
RALGDS
YWHAB
THSD1
SETD5
LRIG2
FANK1
FAM135A
H3C1
H1-1
CELSR3
ZNF644
PRC1
ATXN2
TRIM52
SSX2IP
ACTN2
GINM1
SELENOH
BTBD18
MARCHF6
JPT2
TAOK1
ATXN7L3
MYCBP2
CTF1
BCL7C
SNX7
RTN4
PCSK6
VPS26A
ZNF282
KCTD18
TAB2
ZNF860
OSBPL10
SBNO1
OSBPL1A
H4C4
LMNB1
GAGE2B
PDE4DIP
RFX1
NCOA2
TWF1
UNC5A
NOMO1
MBOAT2
GAGE7
GAGE5
GAGE4
GAGE2E
GAGE2D
GAGE2C
GAGE12I
WDR73
NMB
POGLUT3
STON2
CAPRIN2
DCUN1D4
SH3D19
NFKBIA
LONP1
CATSPERD
NANS
C20orf144
TPM4
CYREN
IMPACT
IL13RA1
ZNF629
DCT
ZMYM4
RANBP17
SLC44A3
C1orf198
TTLL4
ARSB
COG2
CEP350
TLCD3A
DGKH
UBALD1
MGRN1
DEK
UBE2R2
RNF180
ZGLP1
FDX2
SMIM22
ROGDI
SRF
CUL9
CTNNB1
ZFYVE9
SMARCB1
FAM53C
CDC25C
DTNBP1
TLE4
UBE2J1
FGF18
NXF1
PRKACB
NFIB
LTC4S
RPP21
RPL36
ATP1B1
PNPLA7
MRPL41
AKAP13
PRKD3
RNF135
MAP2
KLHL22
RAP1A
VARS2
GTF2H4
MYL6B
MYL6
NPRL3
RALB
N4BP3
H2BC6
STUM
MOCS2
BMP8B
TMEM121B
DIS3L
LRCH2
HAGHL
CCDC78
ANTKMT
STYX
SBF2
SH3GLB1
MNX1
KCNF1
DDX17
CSRNP2
NUCKS1
RNF187
POLR2D
RHOBTB1
VDAC3
GTDC1
RNF217
CDK11B
CDK11A
DRAP1
C11orf68
ZBTB2
HNRNPA2B1
CBX3
TLK1
RP9
NLRX1
NPM3
FGF8