ChIP-Atlas: Target genes

Potential target genes for CPSF3

Query protein: CPSF3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10448667 | HeLa
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
CPSF3's Target genes

◢ CPSF3: Average

◢ SRX8018228: 293

◢ SRX8018229: 293

◢ SRX8018230: 293

◢ SRX8018231: 293

◢ SRX10448664: HeLa

◢ SRX10448665: HeLa

◢ SRX10448666: HeLa

◣ SRX10448667: HeLa

◢ SRX5441330: HeLa

◢ SRX5441331: HeLa

◢ SRX5441334: HeLa

◢ SRX5441335: HeLa

◢ SRX9237243: K-562

◢ SRX9237244: K-562

◢ SRX9237245: K-562

◢ SRX9237246: K-562

◢ SRX8945051: U2OS

◢ SRX8945057: U2OS

◢ CPSF3: STRING

PGK1
CCDC200
C6orf226
SYCE2
GNG14
DHPS
PHF23
GABARAP
DVL2
PPP1R10
MRPS18B
ATAT1
ZC3H10
RPL41
ESYT1
RPL26
KRBA2
MRI1
C19orf53
SYNGAP1
PHF1
CUTA
EPN2
H4C3
H1-6
H2BC4
H2AC6
EDC4
RPL17-C18orf32
RPL17
C18orf32
MRPS16
DNAJC9
NRAS
JMJD7-PLA2G4B
JMJD7
MSH5
MPIG6B
LY6G6C
DDAH2
CLIC1
ARL4D
H4C12
H4C11
H2BC15
H2AC15
UBE2M
CHMP2A
SYNRG
TMEM107
VAMP2
VPS28
ZFP36L1
H4C9
H2BC11
H2AC11
H2BC14
H2AC14
VPS52
RPS18
B3GALT4
SCRIB
SUMF2
RPL22L1
NADSYN1
DHCR7
SLC35E3
H4-16
H2AJ
GPN2
MRPL2
KLC4
CUL7
NDUFAF3
DALRD3
FAM131A
WDR6
MAMDC2
COX20
PRRT2
MAZ
PDE4A
MOGS
MRPL53
NAT10
PACSIN3
ARFGAP2
CXorf38
GADD45B
IFITM3
IFITM1
IFITM2
CHD2
ADM
H4C6
H4C7
H3C7
H2BC9
ID3
PTPN6
C12orf57
ATN1
IER5L
FAM228B
TP53I3
SF3B6
RHOB
MPDU1
LOC100996842
EIF4A1
CD68
SOX15
ZWILCH
SNAPC5
RPL4
FOSL1
FIBP
CCDC85B
PRDX2
JUNB
VTI1B
VEZF1
SCAMP3
FAM189B
ATP6V0C
AMDHD2
SLC38A2
IKBKG
G6PD
GGA2
TUSC2
RASSF1
HYAL2
ZNF628
NAT14
SSC5D
H4C2
H3C2
H2AC4
H4C1
H3C1
H1-1
RIT1
ABTB1
RELA
PRKRIP1
DUX4
SLC39A7
RXRB
RING1
HSD17B8
HES7
ALOXE3
INPP5E
ZNF653
STAG1
FRG2C
GTF2A2
H2BC12
H2AC12
POLG2
DDX5
CEP95
PFDN5
MYG1
H2BC5
H1-4
CAPNS1
MSH4
H1-2
H3C3
PRKAG1
SIT1
CCDC107
ARHGEF39
E2F3
STX10
IER2
ISL2
H2AZ1
DNAJB14
AKAP8
SAR1A
RPS2
RPL3L
RNF151
NDUFB10
ZNF34
RPL8
MT2A
TNFRSF12A
THOC6
HCFC1R1
CLDN6
MT1M
MT1E
MID1IP1
RAD23A
CALR
C6orf47
BAG6
APOM
GPANK1
CSNK2B
LY6G5B
TUBB
MDC1
H2BC21
H2AC21
H2AC20
CDK11B
CDK11A
KIF2C
CITED4
NOP53
MRPL40
HIRA
FLYWCH1
HPDL
MUTYH
DYNLL1
MTA2
TUT1
TRIM41
TMSB4X
SIRT7
PCYT2
MAFG
NAA10
ARHGAP4
IGF2BP3
EEF1A1
ZNF446
ZNF324
H3C6
H2BC8
H2AC8
EIF4A2
SECISBP2
CKS2
ZNF581
ZNF580
CCDC106
P4HB
ARHGDIA
MYC
TRIM8
RRP36
MEA1
EPN1
WDR45
PRAF2
SH3BGRL3
PAGR1
MVP
CYRIB
FLOT2
DHRS13
H3C13
H2BC18
VARS2
GTF2H4
HNRNPA1
CBX5
HMBS
DPAGT1
H2AX
CCDC24
MTRNR2L1
DDIT4
FUT11
CHCHD1
H4C14
H3C15
H3C14
H2AC19
H2AC18
RPL13
CPNE7
FTL
WDR74
SLC3A2
HMCES
ARID5B
POLD1
NR1H2
CDK16
FTH1
BEST1
RPS28
NDUFA7
TRIM37
TSSK4
MDP1
CHMP4A
WBP1
INO80B
POMZP3
MOV10
SCFD1
FADS2
FADS1
CDH24
ID1
CCDC34
RPL27A
SPOUT1
H4C15
CDKN1C
IER3
FLOT1
TBK1
PSMG1
RPS23
ATP6AP1L
STPG3
FAM166A
NELFB
TUBB4B
CD320
MST1
PATZ1
PTMA
UQCC3
LBHD1
CSKMT
C11orf98
TMSB10
SLC25A39
CDC42EP1
LGALS2
SPEN
LDHC
ANKH
TRMT112
PRDX5
ESRRA
DONSON
WDR81
TLCD2
TCTEX1D2
UXT
ELK1
UCKL1
RAB40C
RPS15A
KMT5B
SNAP47
JMJD4
GMPPB
AMIGO3
RPS11
RPL13A
PDCD2L
ATF4
VWA7
CIRBP
FAM174C
NXF1
H4C5
H3C4
H2BC7
H2AC7
TEDC2
IRF2BP2
TLL2
SORBS2
SGK1
IRF2BP1
MYNN
ACTRT3
ZNF48
ZNF771
ZNRD2
FAM89B
EHBP1L1
INTS5
GANAB
NOLC1
SLC35A2
PIM2
STYX
MATR3
CD79A
ARHGEF1
PHLDA1
GMEB2
PCF11
SNX14
H4C4
ARHGAP39
SLC39A4
FAM210B
GINS2
NUDT1
MRM2
MAD1L1
HMGN2
UBTF
CTDSP1
LMNB1
SFN
MAT2A
TSKU
SLC25A11
RNF167
PFN1
ENO3
ZBTB37
KLHL11
PHOX2A
TOM1
GPAA1
EXOSC4
RNASEK
C17orf49
BCL6B
SHC1
PYGO2
PBXIP1
LOC101928120
S100A6
S100A5
NPM3
FGF8
ZBTB45
SLC27A5
GSTO2
H3C12
H2BC17
H2AC17
ZFX
ING1
CARS2
BORCS6
MUC3A
NDST2
METTL8
DCAF17
RCC1
GATD3B
GATD3A
GFAP
IGF1R
CAMK2N2
SFT2D3
SRSF11
RPL35A
LMLN
IQCG
RPL10
DNASE1L1
C5orf24
RPL12
LRSAM1
DUSP2
ASTL
JADE2
HAX1
RPL35
ARPC5L
EIF1
INPP5K
RPL37
WDR46
RGL2
PFDN6
TOB2
TSEN54
LLGL2
CASKIN2
C8orf37
HMGA1
LARP1
MAPK8IP3
SNAPC4
PMPCA
ENTR1
WDR90
MCRIP2
KRT10
PHF8
UBB
GAS2L1
DNAJB4
H1-10
GAPDH
UBC
ILF3
PNRC1
WBP1L
VEGFB
TRPT1
NUDT22
DNAJC4
POLR3D
COX18
RHBDL1
WDR24
STUB1
JMJD8
RBM4
ICA1L
DUSP5
PWP2
LOC102724159
MTIF3
SIX5
DMPK
RPS29
TRIM45
ANAPC4
DPH7
MRM1
DHRS11
PRKDC
MCM4
BAZ2A
ATP5F1B
CEBPB
SP3
JUN
SLC5A5
RPL18A
TTLL3
GINS3
TRIM25
BRF2
GTF2A1
PCBP1
TEX45
OGFOD2
ARL6IP4
DAPK3
NFE2
TUBGCP6
HDAC10
FRG2
NAPRT
MROH6
MLLT6
GET4
MTMR10
VGF
NAT16
ABCF3
PYCR3
TIGD5
EEF1D
SPHK2
SPACA4
RPL18
FAM83E
TYMP
SCO2
ODF3B
RILP
PHLDA2
FSTL3
GRAMD2A
ACVR2B
SMG9
TIMM13
TSC22D1
USP34
XRN1
ZCCHC14
SURF6
FBF1
ZGLP1
FDX2
FIGN
MAML1
SELENOH
BTBD18
ABCB6
TLE3
DYRK1B
NOP56
IDH3B
SYF2
TIMMDC1
ETV6
UNK
H3-3B
NAA80
IFRD2
HYAL3
BAG2
TBR1
TMEM132A
TMEM109
APOLD1
CDKN1B
PPP1R37
CISD3
TRIP6
SRRT
MVB12A
H3C10
H2BC13
H2AC13
CHD5
RAB23
ADK
NKIRAS1
RPL15
PIP5KL1
DPM2
STX5
FAM72B
NOL3
UAP1L1
MAN1B1
HSF4
TRADD
FBXL8
WDR38
ACTN4
SNX16
ARF3
REEP4
HR
KIAA0895L
SELENOI
ADGRF3
TMEM223
TMEM179B
MAPKBP1
TM4SF1
KLF6
LAMP1
PRPF38B
CCNT1
TEX49
ROPN1L
IMPDH2
ATP5F1E
PRELID3B
ZFP36
PLEKHG2
MYL6B
MYL6
PTAR1
PIDD1
SLC25A22
RPLP2
NPRL3
TBC1D22A
RPL3
DRAP1
C11orf68
C19orf71
RPL19
CACNB1
CXCR5
EFCAB13
CDC6
C16orf46
LRP2BP
ANKRD37
PMM1
MAF1
WDR97
CEBPA
CCDC138
YAP1
QSER1
QTRT1
SLC25A10
MRPL12
H4C8
DPH2
B4GALT2
ATP6V0B
YIF1A
TMEM151A
SETD1A
ORAI3
PHF10
IRX3
TCIM
PNMA1
HAGHL
CCDC78
ANTKMT
METRN
APTX
TMEM230
PCNA
RECQL4
LRRC14
LRRC24
C8orf82
ANKRD12
SGF29
TNNC2
UBE2C
NANOS1
SLC39A1
CRTC2
CREB3L4
MRPL28
TTC33
CPS1
TUBA1B
SLC25A28
TNS2
SERINC4
SERF2
HYPK
NARF
CYBC1
H3-2
PXDN
RHOT2
PCBP4
ABHD14B
ABHD14A-ACY1
ABHD14A
CENPA
CALM2
PRMT3
CEBPD
SLC25A35
RANGRF
THOC5
SIGMAR1
ARID3C
CSNK1G1
GPR137
KCNK4
BAD
ARID1B
RABGEF1
LONP1
CATSPERD
TAF2
ZNF782
SPDYE5
POM121C
ZNF513
SNX17
EIF2B4
ZNF35
SLC25A6
CENPH
SLC50A1
EFNA1
DPM3
COA6
XAB2
STXBP2
PCP2
CAVIN3
ACACB
MARCHF6
H3C8
H2BC10
RAB1B
SLC30A7
EXTL2
DPP3
CCND1
RPLP0
GCN1
LENG9
EXOSC6
SHOX2
RSRC1
SEMA4C
MCCD1
PIM1
KATNBL1
PEAK3
OAZ1
P2RY11
EIF3G
PPAN-P2RY11
PPAN
ZNF451
LRP8
NMT1
DCAKD
ATG4D
PHF14
MRPS34
EME2
NME3
SYP
PRICKLE3
NME6
TFPT
PRPF31
MMP24OS
MMP24-AS1-EDEM2
EIF6
ZNF276
VPS9D1
YWHAH
C22orf24
C1orf56
LRPPRC
LRRC25
GDF15
CRK
CS
MICAL3
TAOK2
DDAH1
CCN1
MTFR2
SNX5
MGME1
PMS1
ORMDL1
TAF4
PCBD2
LEPROTL1
TAF10
RRP8
ILK
TPP1
SRSF4
CLN8
NR4A2
PANK1
CEP192
N4BP2
GADD45A
LAG3
FANCC
NCOA5
PTMS
COX8A
SRL
MAP1LC3B
FBXO31
ZDHHC5
FNBP1
RCC2
ADAT1
ROMO1
CELF1
RRAGC
TMEM242
SLC35B2
HSP90AB1
NFKBIE
AQP11
C19orf48
LOC105372440
ACP4
POLR2H
CLCN2
SPAG9
MPHOSPH8
SRCAP
LOC730183
TTYH2
RPL38
NUDT17
BASP1
PAIP2
IL10RB
TPCN1
IQCD
FERMT1
GAMT
ZBTB12
EHMT2
C2
HDAC7
PBLD
HNRNPH3
ZNF143
FOSB
FOS
PYROXD1
GRIN3B
THEM6
TRIM3
TIMM10B
SLURP1
ISY1-RAB43
ISY1
SEMA3B
TBC1D10B
MYLPF
SAT1
SEPTIN1
POP5
TRIM52
CAPN15
LY6L
SIPA1
CHEK1
TYK2
ADGRA1
MAN2C1
MNT
TUBA1C
TPD52L2
ABHD16B
SMTN
JOSD2
ASPDH
ZIC5
ZIC2
NFKBIA
TFAM
ARF6
VAV2
MLXIP
TYW1
SBDS
C1QBP
FAM117B
PCMTD2
THAP7
TLCD1
RPL23A
RAB34
NEK8
RPS27A
CLHC1
COASY
MLX
CLIC3
URGCP
URGCP-MRPS24
SETD1B
RHOF
ZNF696
URB1
SEC14L1
OVCA2
SLC12A6
NUTM1
NOP10
KLC2
UNC13D
WBP2
PHF2
RPL23
C17orf98
RRS1
ADHFE1
SETD5
ATXN2L
EID1
ART1
HYKK
CSGALNACT1
GLE1
NDUFS3
KBTBD4
FAM180B
ZBTB22
TAPBP
DAXX
JUND
IQCN
TRIM69
PDF
NIP7
COG8
RPUSD1
CHTF18
CFD
ELANE
GABARAPL1
CDKN2A
PNPLA6
HUWE1
XBP1
NME4
DECR2
MAP3K1
PHIP
RNF223
DPY30
ARID2
CACNB3
TMEM243
USP8
UBL4A
SLC10A3
LAGE3
MADD
RABL6
CCDC183
FAM156B
FAM156A
TNFSF13
SENP3
IL34
MYOZ3
USP21
UFC1