ChIP-Atlas: Target genes

Potential target genes for CPSF3

Query protein: CPSF3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10448664 | HeLa
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
CPSF3's Target genes

◢ CPSF3: Average

◢ SRX8018228: 293

◢ SRX8018229: 293

◢ SRX8018230: 293

◢ SRX8018231: 293

◣ SRX10448664: HeLa

◢ SRX10448665: HeLa

◢ SRX10448666: HeLa

◢ SRX10448667: HeLa

◢ SRX5441330: HeLa

◢ SRX5441331: HeLa

◢ SRX5441334: HeLa

◢ SRX5441335: HeLa

◢ SRX9237243: K-562

◢ SRX9237244: K-562

◢ SRX9237245: K-562

◢ SRX9237246: K-562

◢ SRX8945051: U2OS

◢ SRX8945057: U2OS

◢ CPSF3: STRING

MAMDC2
MTRNR2L2
MSH3
DHFR
MTRNR2L1
FRG2C
ZC3H10
RPL41
ESYT1
DUX4
PGK1
ARL4D
IER3
FLOT1
H4C9
H2BC11
H2AC11
MTRNR2L8
MUC3A
PRDX2
JUNB
CCDC200
FRG2
H2BC4
H2AC6
SYNGAP1
PHF1
CUTA
HES7
ALOXE3
PRRT2
MAZ
PHF23
GABARAP
DVL2
UBE2M
CHMP2A
MSH4
IFITM3
IFITM1
IFITM2
SYCE2
GNG14
DHPS
ADGRA1
SLC38A2
H2BC5
H1-4
SNX16
TMEM242
ID3
NDUFAF3
DALRD3
WDR6
H4C14
H3C15
H3C14
H2AC19
H2AC18
VPS52
RPS18
B3GALT4
H4-16
H2AJ
MYC
H4C15
MPDU1
LOC100996842
EIF4A1
CD68
NAT10
SOX15
C6orf226
STX10
IER2
H4C12
H4C11
H2BC15
H2AC15
IER5L
GADD45B
PPP1R10
MRPS18B
ATAT1
SIX5
DMPK
RPL17-C18orf32
RPL17
C18orf32
WDR74
STX5
ART1
ADM
FTH1
BEST1
DDIT4
H4C3
H1-6
H4C2
H3C2
H2AC4
H4C1
H3C1
H1-1
PTMA
H2BC12
H2AC12
ZBTB45
SLC27A5
TMSB4X
GAPDH
H2BC14
H2AC14
RAD23A
CALR
RCC1
SYNRG
PSMG1
EDC4
RHOB
RPS28
NDUFA7
RPL26
KRBA2
C1QTNF8
RPS2
RPL3L
RNF151
NDUFB10
PACSIN3
ARFGAP2
EIF4A2
JMJD7-PLA2G4B
JMJD7
MRI1
C19orf53
SUMF2
MT2A
H2BC21
H2AC21
H2AC20
H2AZ1
DNAJB14
MRPS16
DNAJC9
P4HB
ARHGDIA
RELA
NPDC1
ENTPD2
PRKAG1
SLC35E3
CEBPB
TUBB
MDC1
COL23A1
UCKL1
PTPN6
C12orf57
ATN1
GPAA1
EXOSC4
MID1IP1
DUSP2
ASTL
SLC3A2
RPL12
LRSAM1
RPL13
CPNE7
LY6L
NOP53
ARHGAP39
COX18
VPS28
RIT1
ZNF34
RPL8
ABTB1
CLN8
H4C6
H4C7
H3C7
H2BC9
WDR46
RGL2
PFDN6
DAPK3
CCDC24
SLC50A1
EFNA1
DPM3
NRAS
CDK11B
CDK11A
RPL22L1
PDCD2L
GRAMD2A
LOC102724770
DGCR6
TRIM8
VTI1B
ZWILCH
SNAPC5
RPL4
FAM228B
TP53I3
SF3B6
RPS15A
UPF3A
H3C12
H2BC17
H2AC17
MRPL28
RCE1
SLC25A11
RNF167
PFN1
ENO3
ZNF628
NAT14
SSC5D
SLC39A7
RXRB
RING1
HSD17B8
CFD
CCDC34
ZBTB12
EHMT2
C2
HNRNPA1
CBX5
NFE2
POLG2
DDX5
CEP95
PAGR1
MVP
GAMT
IKBKG
G6PD
P2RY11
EIF3G
PPAN-P2RY11
PPAN
KMT5B
H3C6
H2BC8
H2AC8
RPL35
ARPC5L
WDR38
MT1M
MT1E
PFDN5
MYG1
SLC16A3
ZNF48
ZNF771
PDE4A
ZFX
UBTF
ZBTB37
VEZF1
H1-2
H3C3
EIF1
PHLDA1
CHD2
MAML1
ADAMTS10
SECISBP2
CKS2
ATP5F1E
ID1
GTF2A2
BRF2
SIT1
CCDC107
ARHGEF39
PIP5KL1
DPM2
FAM131A
TMEM230
PCNA
CYRIB
CXorf38
RABL6
CCDC183
SCRIB
GMEB2
LDHC
PHOX2A
CTDSP1
MRM1
DHRS11
H4C5
H3C4
H2BC7
H2AC7
H4C4
BTNL9
NADSYN1
DHCR7
MAPKBP1
HMCES
FTL
MAF1
WDR97
TNFRSF12A
THOC6
HCFC1R1
CLDN6
COX20
MOGS
WBP1
INO80B
APOLD1
CDKN1B
TRIM37
NOP56
IDH3B
OGFOD2
ARL6IP4
AKAP8
IGF2BP3
POMZP3
PHRF1
UNK
H3-3B
H1-10
AQP3
FLOT2
DHRS13
ZNF446
ZNF324
GGA2
YY1
CIRBP
FAM174C
SCAMP3
FAM189B
MRPL2
KLC4
CUL7
SYF2
SETD1A
ORAI3
INTS5
GANAB
RECQL4
LRRC14
CD79A
ARHGEF1
MFSD3
GPT
WDR37
IDI1
SHC1
PYGO2
PBXIP1
LOC101928120
MTA2
TUT1
IRX3
MAT2A
RRP36
MEA1
H3C13
H2BC18
GPN2
HMBS
FUT11
CHCHD1
DPAGT1
H2AX
C6orf47
BAG6
APOM
GPANK1
CSNK2B
HAGHL
CCDC78
ANTKMT
GSTO2
METRN
CDK16
ATP6V0C
AMDHD2
TMSB10
ANAPC4
RPS11
H3C8
H2BC10
E2F3
TOM1
H3C10
H2BC13
H2AC13
RPLP0
GCN1
SCFD1
CDC42EP1
ZBTB22
TAPBP
LGALS2
DAXX
FAM156B
FAM156A
RHBDL1
WDR24
STUB1
JMJD8
DRD4
RPEL1
TUSC2
RASSF1
SH3BGRL3
HYAL2
TSC22D1
ARID5B
PYCR3
TIGD5
EEF1D
RGS19
OPRL1
LKAAEAR1
STPG3
FAM166A
NELFB
TUBB4B
NAA10
ARHGAP4
SLC12A6
NUTM1
NOP10
LGR6
EEF1A1
MAPK8IP3
UXT
ELK1
TLCD1
RPL23A
RAB34
NEK8
DPH7
ZNHIT2
TM7SF2
MRPL49
FAU
TUBA1B
ZNF584
ROPN1L
RPS29
SEC14L1
ZNF285
FAM210B
CENPA
MVB12A
SNAP47
JMJD4
NKIRAS1
RPL15
MRPL53
ICA1L
ROMO1
RNASEK
C17orf49
BCL6B
RPL27A
LRRC24
C8orf82
CDKN1C
ABHD10
UBC
HMGN2
UBB
PRKRIP1
ZNF581
ZNF580
CCDC106
ISY1-RAB43
ISY1
NOLC1
THEM6
GNE
TMEM134
SLURP1
RPL13A
NPM3
FGF8
CEBPA
MUC1
BASP1
KLRC2
C19orf48
ZFP36L1
LOC105372440
ACP4
MLLT6
RPL10
DNASE1L1
ZNF703
MAPK11
SIRT7
PCYT2
MAFG
NDST2
TUBGCP6
HDAC10
PLPP5
NUDT1
MRM2
MAD1L1
GMPPB
AMIGO3
MYOZ3
KAZALD1
UQCC3
LBHD1
CSKMT
C11orf98
C5orf24
SLC5A5
RPL18A
ZNF653
FLT4
OSTC
TEDC2
STYX
SFN
MOV10
PCF11
CAMK2N2
CDH24
MTFP1
TMEM132A
RAB40C
PRMT3
VEGFB
TRPT1
NUDT22
DNAJC4
TBCD
RPL37
GFAP
PDPK1
CEMP1
RPL35A
LMLN
IQCG
CDC34
SRSF11
ADAT1
SSH3
TNFRSF6B
RILP
SP3
SLC35A2
PIM2
SEMA3B
FBF1
PCBP4
ABHD14B
ABHD14A-ACY1
ABHD14A
NFKBIA
EPN1
MFN1
DYRK1B
CELF1
GATD3B
GATD3A
NME4
DECR2
CCDC97
TBR1
CKB
MSH5
MPIG6B
LY6G6C
DDAH2
CLIC1
KLHL11
INPP5K
PCBP1
SGK1
RNF223
TSSK4
MDP1
CHMP4A
TMEM121
SCGB1C2
SCGB1C1
ODF3
WDR90
MCRIP2
ATF4
TAF10
RRP8
ILK
TPP1
TMEM223
TMEM179B
C1QTNF12
SDF4
B3GALT6
SRSF4
ZNRD2
FAM89B
EHBP1L1
TCTEX1D2
PDF
NIP7
COG8
POLB
TPD52L2
ABHD16B
PPP1R15B
MYL6B
MYL6
HMGA1
SMIM29
RAB5B
PMEL
CDK2
CISD3
MRPS34
EME2
NME3
SPATC1L
NR3C1
PTOV1
ADK
CSNK1G1
VWA7
FLYWCH1
DLG4
ACADVL
ZFP37
SLC39A10
TFAP2A
GAS2L1
COASY
FNBP1
MLX
PRR7
DBN1
C16orf46
NOL7
TUBD1
RPS6KB1
TTC33
VPS4A
CLIC3
SPOUT1
TBK1
MMP24OS
MMP24-AS1-EDEM2
EIF6
KIF2C
TMUB1
FASTK
AGAP3
CTNNAL1
GPS2
EIF5A
SLC25A17
NFATC3
C8orf76
DONSON
NAA80
IFRD2
HYAL3
HYAL1
C11orf91
BAZ2A
H4C8
ATP5F1B
XRN1
LARP1
CRK
SLC25A6
NUMBL
CHD5
CEP192
CAPNS1
SNX14
KLC2
PHLDA2
GET4
BAG2
CASP6
CACFD1
TNFSF13
SENP3
SLC2A6
MST1
ST3GAL3
MAP1LC3B
FBXO31
NMT1
DCAKD
STAG1
C19orf71
S100A6
S100A5
KIAA0895L
NOL3
TMEM107
VAMP2
PLPPR3
KRT10
RBM4
ABCB6
NOXO1
GFER
NUDT17
FHL3
SYNGR3
SF3A3
TNS2
TBL3
SLC39A4
TNNC2
UBE2C
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
TRABD
SELENOO
RASD1
RPL10A
DUSP1
CITED4
SRSF2
MFSD11
METTL23
JMJD6
POLD1
NR1H2
HPDL
CXCR5
RPL23
C17orf98
ZNF35
TAOK2
MCCD1
HES3
ICMT
ZASP
SAP25
NXF1
SLC25A39
INPP5E
ACTL10
NECAB3
SELENOH
BTBD18
RABGEF1
GAS1
SPHK2
SPACA4
RPL18
FAM83E
RPL3
CAPN15
TFPT
PRPF31
NOP2
PARP10
PLEC
RPS5
TSEN54
LLGL2
RNF225
POMT1
DPP3
PRR25
C7orf26
RPL19
CACNB1
MLH3
SURF6
SNX5
MGME1
IAH1
ANKRD12
CEBPD
WDR81
URGCP
PIDD1
URGCP-MRPS24
SLC25A22
TLCD2
RPLP2
DBP
ACOX3
TAP2
TAP1
PSMB9
PSMB8
NANOS1
IGF1R
LRP2BP
ANKRD37
LENG9
TTLL3
MAN2C1
TRAF7
RAB26
MYO1G
HAX1
CELSR3
TSPAN31
MARCHF9
CDK4
AGAP2
HSPB1
SLC25A10
MRPL12
NAPRT
MROH6
OR2T1
AJM1
METTL26
ZNF865
ZNF524
FIZ1
SHOX2
RSRC1
WDR62
THAP8
ANKRD39
RPS23
ATP6AP1L
IRF2BP1
C5orf15
FADS2
FADS1
MPHOSPH8
TIMM13
TENT4A
RGP1
MSMP
GBA2
PYGM
SLC25A42
CS
TXN2
HCN2
PTCH1
TIMM17B
PQBP1
PFN2
TIGD3
BAHCC1
GPR137
CRELD1
IL17C
PLEKHN1
NOC2L
KLHL17
PEAK3
OAZ1
ACTG1
ETS2
ABCF3
SLC35B2
HSP90AB1
WDR27
C6orf120
TEX22
WDR45
PRAF2
PABPN1
GDI1
FAM50A
ATP6AP1
ANP32B
RRM1
AEBP1
ZNF517
RCC2
RPL36
RPLP1
ZNF335
GH1
CSHL1
MAPKAPK5
TSN
RABL2B
RABL2A
SRD5A1
NSUN2
POLR3F
DZANK1
CACTIN
NVL
DYNC1LI2
NUP85
MRPS7
MIF4GD
GGA3
ICE1
VDAC2
IPO13
NME6
RWDD1
OAZ3
REXO1
PSMD12
LYRM4
FARS2
SLC35B1
S1PR4
NCLN
SUCLG1
ZNF576
IRGQ
TAOK3
SUDS3
HSPA9
CAPRIN1
FAM187A
EFTUD2
CCDC103
UBE2I
POLR2E
GPX4
RBBP5
PSMG2
GOSR2
CEP76
UPF2
EXOSC5
BCKDHA
SMIM14
DCTN1
VARS1
NNAT
BLCAP
MRPL11
MRPS5
NUP205
HADHB
HADHA
HMGB1
STAM2
CDC73
ACTR10
COX7A2L
PSMD1
POLR2J3
TSNAX
PAK1IP1
C6orf52
SEC61B
COMMD1
CCT4
STAM
USP29
SART3
ISCU
RPS27A
CLHC1
SKP1
PI4KB
RABGGTB
SUPV3L1
USP1
PDAP1
BUD31
PES1
MRPL40
HIRA
NDUFA4
ZRANB2
RPL21
UGT1A4
UGT1A3
EIF2S3
FARSB
ATP5MG
IRF2BP2
EPN2
TM9SF1
IPO4
KMT2A
SFI1
EIF4ENIF1
HDGF
PTGES2
TAF9
RAD17
AK6
SELENOF
HS2ST1
EFNA2