ChIP-Atlas: Target genes

Potential target genes for SOX9

Query protein: SOX9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX13867217 | MCF-7
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX9's Target genes

◢ SOX9: Average

◢ SRX718108: hESC derived pancreatic cells

◢ SRX4065343: hESC derived retinal cells

◢ SRX4065344: hESC derived retinal cells

◢ SRX4065345: hESC derived retinal cells

◢ SRX4065346: hESC derived retinal cells

◢ SRX4065347: hESC derived retinal cells

◢ SRX4065348: hESC derived retinal cells

◢ SRX11220467: HT-29

◢ SRX11220468: HT-29

◢ SRX768290: HT-29

◢ SRX11416753: KARPAS-422

◢ SRX11856133: LNCAP

◢ SRX11856134: LNCAP

◢ SRX11856137: LNCAP

◢ SRX11856138: LNCAP

◢ SRX11856139: LNCAP

◢ SRX11856140: LNCAP

◢ SRX11856141: LNCAP

◢ SRX11856142: LNCAP

◢ SRX359919: LoVo

◢ SRX13867212: MCF-7

◢ SRX13867213: MCF-7

◢ SRX13867216: MCF-7

◣ SRX13867217: MCF-7

◢ SRX10175282: PANC-1

◢ SRX10175283: PANC-1

◢ SRX1510444: VCaP

◢ SOX9: STRING

DUX4
FRG2C
MYO5C
ZNF217
PPP2R2C
PLEKHB1
PDE6A
SMARCD2
FAM102A
DGLUCY
NCOA3
MYH14
LRATD2
FAM227B
DTWD1
ATG101
MAPK6
AMOTL2
SOX8
LMF1
CNP
SAP30BP
RECQL5
CLDN12
LYSMD2
WWOX
PPDPF
ARL4D
KPNA2
KANK1
UGT2B7
TMOD2
PFDN4
OTOGL
TSC22D1
PAQR4
KREMEN2
ART1
ANP32B
SORBS3
NHLH1
VTCN1
PDE4DIP
HSP90AB1
SLC35B2
NFKBIE
MTF2
RPS29
LRR1
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
SMIM35
SLC38A2
MTSS2
RUBCNL
FMO5
FYN
ITGB8
UXS1
ARHGEF1
DUSP6
LAD1
VPS37B
DNAJA4
RDH12
RDH11
RNF43
TRIM37
TUBD1
RPS6KB1
HLF
SOWAHA
SHROOM1
LZTS2
PSMD6
B3GALT2
POR
MBNL1
PRR7
STX16
TMBIM4
KMT5B
PARD6B
PPP2R2B
DAB2IP
ZKSCAN1
PRICKLE2
RTKN
TRNP1
PLCE1
PCYT1A
CDK2AP1
HBP1
RPS3
CENPP
ZNF3
COPS6
TMEM258
FEN1
VGLL4
HAO2
TSKU
TEDC1
FGD5
CALN1
ARHGAP39
ZNF831
BTBD3
ZFP3
TMEM167B
TAF13
FAM86B1
TSPAN8
RORC
C2CD4D
PXMP2
POLE
TREH
BACE1
HACD3
PRORP
PPP2R3C
PDE8B
PBX2
GPSM3
LMCD1
THUMPD1
KCNJ10
FMO1
SPTB
MGLL
CA12
BMP7
SPATA13
HR
PRR16
MAP4K5
ATL1
IFT46
ARCN1
MTMR7
HDHD3
FGFR2
DHX36
NFE2
TRPV4
LY6L
SLC25A24
DCLRE1B
AP4B1
GLDN
SEMA3B
TMEM229B
TBRG4
NREP
SLC35F1
ZCCHC4
CD55
ZHX3
FAM222B
ATXN2L
NIPAL4
CLDN11
SNX30
EMSY
SYT1
FAM71D
CNNM2
CYP2W1
COX19
KRT19
KRT15
S100A10
COL9A1
TEX50
FGD3
LAMA4
TCP11
PSMG2
SPIRE1
CNIH1
ABCA5
PTPRA
N4BP3
SLC5A11
TBX2
DRAP1
C11orf68
STX18
LMNB2
RPUSD3
CFAP70
CDYL
CTHRC1
C19orf38
BTNL9
BCL9L
PPP6R1
ZBTB3
DPY19L4
TM4SF1
CCDC130
CYB5R2
HEATR5A
EIF4G3
TRAF4
ZNF180
C8orf48
FRG2
ACVR1B
PAPSS1
SZT2
MED8
SRPK2
CEP97
TMEM94
CNPY2
CDH26
MYADM
AQP5
ARHGAP27
AQP6
IGFBP7
SART1
TRIM2
MAP11
HEXIM2
MECP2
STAG3
GPC2
GAL3ST4
VILL
CNDP1
GATAD2B
ZNF407
PCED1B
AMIGO2
IL16
SLC25A10
MRPL12
ZP3
LMNA
MEX3A
USP32
PSMD1
NCALD
SEC14L5
PDXP
ELK4
KANSL3
FER1L5
GPR33
YWHAQ
RIPOR3
PDXDC1
HPS5
GTF2H1
MCM7
AP4M1
SMIM5
ZNF609
NOCT
GLIPR1L1
CAPS2
CHST1
ACOT2
CIPC
RHOC
LOC102724770
DGCR6
ABHD11
H2BC15
H2AC15
AP4E1
MEF2C
DLST
CSDE1
CADM1
FXYD3
GPR25
ZNF281
PLEKHG4
KMT2A
ZNF24
E2F6
FAM227A
CBY1
INSC
RNFT1
HMGB1
USPL1
RMND5B
LMOD3
VMP1
PTRH2
DHRS11
MYH11
LCP1
SLC33A1
ARHGEF12
CRYM
DGKA
KIF12
ATP1B1
PCDH9
NPY4R2
NPY4R
EIF2D
TBC1D14
INTS5
EPYC
UQCC3
LBHD1
CSKMT
C11orf98
ANKDD1B
PRRC2B
OR6C68
WWP1
MPP7
HMG20B
MAST2
CLIP1
SERPINA1
FAM178B
TMEM100
RPH3A
MMP17
TBC1D30
SULF1
CA8
NWD1
PPFIBP2
FAM13C
TAF11
ANKS1A
TRIM50
FKBP6
PCDH1
KIN
ATP5F1C
SVOPL
ATP6V1G3
LSMEM1
KRT23
MAT2A
SSBP1
MAST4
GAS7
RAB8B
TNRC18
LOC100129484
PTCD1
CPSF4
NRAS
PRKCD
SLC35E2A
CUEDC1
PHLDA3
KRT16
TRIM33
EFNA4
PLA2G7
TRAK1
UBXN2A
SLC6A9
PTGES3
SLC11A2
EML4
PMP2
SGCE
PEG10
TMEM262
WDR31
BSPRY
PI16
ARHGEF10
HDAC11
C20orf204
COL2A1
USP15
TMCC2
SELENOI
ADGRF3
TMEM177
NOXO1
SYNGR3
GFER
SYT7
TMEM170A
LRRC74A
RHOB
SYCP2
PPP1R3D
FAM217B
CEP112
SCCPDH
LRRC75B
GGT1
SMC4
IFT80
S1PR2
KDM3A
WWTR1
TMEM129
TACC3
CFDP1
NOL4L
CCDC200
CNOT6
SCAF8
DCSTAMP
GYG2
ABTB2
HOXA3
HOXA4
ROPN1B
DLGAP4
LRRC63
COMP
EHF
SOX6
LOC389199
POU2F1
PERP
SLC27A1
PTP4A1
FGA
PIM1
SCRT1
DGAT1
EPC2
MINAR1
ZBTB48
SORT1
RPL26L1
YLPM1
RABGAP1L
NINJ1
SNX31
ETV4
H3C6
H2BC8
H2AC8
MED23
THEM4
SEC14L2
RNF215
BICRA
C18orf21
WDR53
FBXO45
VARS2
GTF2H4
APPBP2
ASB14
LCE2A
OTUD7B
NME1
SLC25A45
FRMD8
PRDX1
PLD4
AGR2
INTS12
GSTCD
RBBP5
ARL6IP1
ASPM
STARD13
PDE4D
MICAL2
CFTR
KRT76
KRT3
SUOX
WDR74
STX5
COL9A2
KLHL32
HSD17B7
CHST11
OTOA
RUVBL1
EEFSEC
SPEG
BMT2
IQSEC1
SRGAP2B
RPL32
SLC44A1
CFAP20
PRAMEF18
REEP1
CPM
MRPL22
GEMIN5
KDSR
FAM86B2
FGFR4
EXOSC10
SIX6
LOC105378979
DSC2
SLC35E3
B4GALNT1
FAM20B
INPP4B
ABCC5
UPF3A
OGA
MKRN2OS
MKRN2
ZNF787
ARF6
PPIB
FBXO32
SYT8
DDR1
ERO1A
AFAP1L1
YY1AP1
DAP3
MRPL21
IGHMBP2
VIRMA
ECH1
ANKRD35
RGMA
SFXN5
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
RSAD1
CHAD
DEPDC1B
ST3GAL4
PPP1R36
HSPA2
MIDEAS
PKN1
HDDC2
SELENOW
DCPS
SIVA1
POC1B-GALNT4
POC1B
GALNT4
GRK5
LOC100505841
RPS7
RNF103
LEPROT
LEPR
DERL1
SCRIB
PIK3R1
PUF60
SRGAP1
ANK3
SMIM6
SPP1
FAM78B
RNF19A
CYTH1
PRUNE1
MINDY1
TNKS2
ITGB4
AKIRIN1
NELFCD
ACSS3
ZNF277
DOCK4
CTNNB1
SVIL
KRCC1
NEMF
GBA
TPK1
SNORC
SEPTIN8
DAAM1
MFSD2B
KDM7A
FRAT1
USP3
AKR1E2
STRADA
HK3
SPATA2
EEF1A1
PRKAR2B
ANKS4B
WASF1
CDC40
USP8
HACL1
BTD
PLOD2
RAB4A
IFI35
RPL27
PLEC
NEDD4
FAM104A
C17orf80
UGT8
PARP10
CABP7
NFIB
PPME1
C2CD3
TACO1
ART4
CDH3
GOLGA6C
GKN1
MMP16
POMT2
GSTZ1
PAM16
ARID2
COL21A1
MLKL
MRPS18A
EIF2AK1
MRRF
OC90
AXIN2
MYL12A
SRP19
DKK3
FAM72B
PCYOX1L
NDUFAF6
DST
MYEF2
CTXN2
EIF3B
CGRRF1
TEX14
RAD51C
TBXAS1
HIPK2
PREX1
RABGEF1
MRPL40
HIRA
TSTD2
NCBP1
ALDH3B1
KMT2E
HNRNPH1
GPR89B
IRAK1
NT5C3A
SLIRP
ALKBH1
TRIM73
BARHL1
LHX9
ZDHHC17
RASGRP3
RAPGEF1
TYRO3
DMXL2
CFAP100
FAT1
SRGAP2C
MYL12B
HIPK1
SLC39A8
SBNO1
CDCP1
CTDSP2
DNAJC14
BRIP1
NEDD4L
NUCKS1
TAF1C
RPL30
ATXN7
VTI1B
ELMO1
DSTYK
NCSTN
COPA
GABPB1
DECR1
MARCHF8
CYP24A1
GPRC5D
SLC16A1
CORO2B
TRAF1
TBX4
CLCN3
BCAS4
NEK1
AURKAIP1
BCAS3
KLF10
NQO2
MARVELD1
LTBP1
SH3YL1
ACP1
POGZ
GALK2
PRKAB2
CHD1L
PADI2
TRIM16L
GPR75-ASB3
GPR75
TENT5D
BACH1
SLAIN1
GALNT11
IQGAP1
ADAT1
TNNI3
DNAAF3
LIMCH1
PAN3
CAV2
ABCB4
BNIP1
B4GALNT3
ARHGAP21
MAD2L1BP
GTPBP2
LHFPL6
PI4K2A
S100A13
S100A1
CHTOP
EFCAB2
RAB17
NKX2-8
CD244
LIME1
SLC2A9
BTN3A1
PRKCI
BCL2A1
PPM1D
AOPEP
TSC22D2
GPC3
LCK
FAM167B
PRKDC
MCM4
RAB33B
COMMD2
SPDYE14
SPDYE10P
CASTOR2
IFNAR2
POLR2J3
CALU
RNF169
TMX1
NRCAM
ARL8B
TPT1
TRIM74
PHRF1
DYNC2I1
NAP1L4
SRF
SMARCB1
KIF21A
PKIB
C11orf91
TAC4
CIDEC
GPC5
IDI2
CPLX2
DKC1
MGRN1
TESK2
MMACHC
SLC50A1
EFNA1
RPIA
PEMT
NFATC2
MOBP
MAP2
AMOT
RHOJ
ATP2B1
SETD5
TBC1D31
DRG2
ATP5MC2
CELF1
TSPAN14
RESF1
CPA5
CLUAP1
RNF144A
OPA1
EIF3E
HAO1
GNAS
NACA
NPIPB9
THAP12
GVQW3
ZNF444
ZNF775
MRPS31
HMGCR
NUDT2
KIF24
BPTF
FAM207A
SMAD3
NPC1
PELI1
SRSF7
SPAG1
POLR2K
MED9
TMOD1
RNF122
C10orf67
LTBP2
LRCH1
SMG8
UNK
TIAL1
SLC39A6
ELP2
SLC28A3
TRIP6
SRRT
CEP85L
RAP1A
NPIPA3
NPIPA2
PLA2G10
PARN
BFAR
CA6
RNASEH2A
PRDX2
EAPP
WDR11
MARCHF3
NDUFAF5
ESF1
TADA1
ZC3H3
SLC2A13
MAFF
AMOTL1
KHDC1
ACP7
HK2
FAM72C
FAM72A
MYBL2
RCN2
TUBA1B
RTL9
SFXN1
TECTB
PRTFDC1
PLCL2
CLTC
ADCY8
ATP10B
ARHGAP19
FZD1
LRRC37A3
ZNF488
STAP1
PROKR1
SPTBN1
ARNTL
CDIPT
METTL15
KIF18A
VCPKMT
OTUD6B
RASA1
NANOS2
SPRYD3
ADSS2
GSTA4
IGF2BP2
PARP1
PFKFB4
ZFHX3
LRRC70
MAP7D3
HUS1
HERPUD2
TAF1L
CSGALNACT1
RMDN1
CPNE3
ATP13A3
ZNF484
PLD1
C5orf15
CLASP1
TEN1
ACOX1
GNB2
ELF1
SPATA9
RHOBTB3
USF3
WIZ
FAM214A
PEX3
ADAT2
KRT8
BRWD1
HAUS5
NHP2
CYP19A1
RBM4B
KLK14
HSPB9
NSFL1C
POLR3E
NDUFAB1
EIF2S1
ATP6V1D
TPM4
SLC6A14
VGLL1
NBEAL2
CCDC12
MRPL44
TOM1
RHBDL1
RHOT2
UBE3C
SDC4
TBC1D12
IL13RA1
DCUN1D1
ARL4C
DENND2C
NOL11
RBBP8NL
MLEC
ITPK1
CCDC146
CDK5RAP3
OAZ3
ATP8B2
ZBTB10
ETNK1
EIF1AD
CST6
BANF1
COBLL1
COPS4
PARP4
CLDN4
KLHL21
CYB561
NUCB2
GTF2H2
TOP1MT
RHPN1
UBE2N
GNS
RIPOR1
RASAL2
PCCB
CERS2
MRGPRX3
IL17F
LSR
SNX11
CBX1
ZNF883
SLC35B1
MRGPRX4
IL25
CMTM5
CTSO
CARM1