ChIP-Atlas: Target genes

Potential target genes for SOX9

Query protein: SOX9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10175283 | PANC-1
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
SOX9's Target genes

◢ SOX9: Average

◢ SRX718108: hESC derived pancreatic cells

◢ SRX4065343: hESC derived retinal cells

◢ SRX4065344: hESC derived retinal cells

◢ SRX4065345: hESC derived retinal cells

◢ SRX4065346: hESC derived retinal cells

◢ SRX4065347: hESC derived retinal cells

◢ SRX4065348: hESC derived retinal cells

◢ SRX11220467: HT-29

◢ SRX11220468: HT-29

◢ SRX768290: HT-29

◢ SRX11416753: KARPAS-422

◢ SRX11856133: LNCAP

◢ SRX11856134: LNCAP

◢ SRX11856137: LNCAP

◢ SRX11856138: LNCAP

◢ SRX11856139: LNCAP

◢ SRX11856140: LNCAP

◢ SRX11856141: LNCAP

◢ SRX11856142: LNCAP

◢ SRX359919: LoVo

◢ SRX13867212: MCF-7

◢ SRX13867213: MCF-7

◢ SRX13867216: MCF-7

◢ SRX13867217: MCF-7

◢ SRX10175282: PANC-1

◣ SRX10175283: PANC-1

◢ SRX1510444: VCaP

◢ SOX9: STRING

MTRNR2L2
MSH3
DHFR
MAMDC2
KIF5C
RGPD1
RGPD2
MTRNR2L8
EPN1
MUC3A
ZNF229
PMF1-BGLAP
PMF1
MTRNR2L9
ZNF285
MTRNR2L1
SNX16
ARL4D
VPS37B
SPAAR
HRCT1
PBX2
GPSM3
LOC102724770
DGCR6
FRG2C
CCDC200
ADGRA1
BCL9L
ART1
FOSL1
SPTBN1
WDR74
STX5
RGS19
OPRL1
LKAAEAR1
COL23A1
FRG2
CTDP1
TMEM242
TECR
DNAJB1
SLC6A19
MRPL23
DUX4
AFAP1
PHRF1
CHI3L2
PTPRN2
CYP4F11
MMP8
IRF2BP2
LGR6
MICAL2
BMP5
OR2T1
OSGIN1
MRPS10
TRIM48
SDF4
B3GALT6
C1QTNF12
CACNB2
NWD1
DRD4
SYT8
VWA1
TMEM88B
PSAP
YBEY
MCM3AP
GALR1
MYADM
NPDC1
ENTPD2
ADAMTS9
NOXO1
SYNGR3
GFER
NEUROG3
SH3KBP1
FGFR2
KIAA0895
ANLN
RORC
C2CD4D
WBP1L
FBN3
TRNP1
SART1
CFLAR
EGR2
LINGO1
FLT4
PLCE1
SPATA20
EPN3
PCBP2
PRR13
UBR7
GON7
USP17L20
USP17L22
USP17L11
USP17L18
USP17L17
USP17L19
OTUB2
CCSAP
AGPAT3
AURKAIP1
CRYAA2
CRYAA
SCGB1C2
SCGB1C1
ODF3
BTNL9
MTF2
ARHGEF12
TLCD5
HMX2
HMX3
NKX1-1
SBNO2
TMEM143
SYNGR4
MAST2
ZNF780B
SYNJ2
ZFP37
ARHGEF1
KRTAP21-2
UCKL1
ITGA6
MYEOV
ARRDC4
RNF13
PTF1A
MYT1
GBA
GSN
NEK6
KRT17
FCMR
PLA2G7
RPS7
ALG10
HLTF
PIH1D1
ALDH16A1
AGRN
ITGB3BP
EFCAB7
BAIAP2
COPS7B
PDE6D
SYTL2
USP30
PAFAH2
SDHA
CCDC127
HBP1
TNRC18
LOC100129484
PAX4
CCNC
LARP6
KIF12
ANKRD18B
GTF3C3
C2orf66
PDCD6
IL17RB
CHDH
FRA10AC1
PCDH9
SLC16A11
EAPP
PLD3
C19orf47
NPIPA1
WDR36
GFM2
SCNN1D
SEMA3B
CCDC9B
SMC4
IFT80
ALKBH3
RBBP5
ARID5A
ZNF24
PELI1
VGLL4
TINAGL1
TMEM262
SUGCT
MPLKIP
SUPT7L
SLC4A1AP
MDH1
WDPCP
BSG
PAQR4
KREMEN2
TM4SF1
RTKN
ZNF780A
GALK2
COPS2
BRSK2
LGALS16
KCNH8
KANSL1
DDAH1
CCN1
INPP5A
STX16
HCK
ZDHHC6
VTI1A
ZNF12
KMT2A
TBC1D3J
TBC1D3L
TBC1D3K
TBC1D3I
TBC1D3H
TBC1D3G
TBC1D3F
TBC1D3E
TBC1D3D
TBC1D3C
TBC1D3
NDUFS3
KBTBD4
FAM180B
NPEPL1
SLC33A1
TRIM2
PUS10
PEX13
GABPB1
NDUFB3
FAM126B
MRPL44
EFCAB2
ALG10B
GLI2
PTMA
WEE1
KRR1
ZBTB32
WDR11
ZNF644
CLC
EIF2D
NUF2
ETV6
RAG2
IFTAP
NXT2
DSTYK
EIF3F
MED23
BRD2
KDM3A
RRP15
ZNF391
G3BP2
SLC35E2B
PAX8
SLC35E2A
PKDCC
POR
PPDPF
ATG101
CDYL
SMARCD2
PDXDC1
SNAP29
PI4KA
PFDN4
POLG
PLEKHB1
IQCH
AAGAB
TBL3
PRKCI
LZTS2
TAF15
PARK7
DAB2IP
MYH14
PPIB
RNASEH2A
PRDX2
MYO5C
LRRC75B
GGT1
SOWAHA
FAM53C
CDC25C
EIF3B
OGA
CNOT6
KLK6
PTDSS1
MTERF3
LSR
DLST
AKIRIN1
GIT2
ANKRD13A
PCDH1
NOP56
PGBD4
EMC7
YY1AP1
DAP3
FAM227B
DTWD1
CENPP
LRATD2
MYL12A
GNB2
SMIM41
DOLPP1
EED
FRAT2
CLDN9
ATG16L2
WDR97
MAF1
CYC1
PIK3R3
RHBDD3
MYO9B
HAUS8
EWSR1
SLC35A5
ATG3
ZNF775
CMC2
CENPN
USP15
PLEKHG4
CYP2W1
COX19
FOS
SOX8
LMF1
TMEM129
TACC3
PRR19
PAFAH1B3
FAM102A
SLC25A41
KHSRP
FAM72B
RAB4B
MIA
NDST2
UNKL
MRPS24
UIMC1
C16orf91
FRAT1
FAM72C
PRKDC
MCM4
PDE8A
LY6L
MYL12B
CDCA7L
SETD5
TNNI3
DNAAF3
PMVK
PPP2R2C
CNFN
PTOV1
SLBP
DNMT1
ETNK1
UROS
BCCIP
NOTCH1
ZNF217
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
IQCE
TIGD5
EEF1D
KMT5B
SELENOW
COMMD6
ETV2
COX6B1
MAT2A
BCL6
FAM72A
HMGCS1
CFDP1
WWOX
PGP
DGAT2
TAF6
MBLAC1
FUS
CNPY4
TMEM63A
LEFTY1
ZNHIT1
PLOD3
PPP6R1
PDE4DIP
AMOTL2
LAMB3
ABHD11
PAXIP1
UCHL3
RPS29
WWP2
ATP6V0C
AMDHD2
FLCN
ZNF219
TMEM253
PPP5D1
CALM3
WASL
CIC
TSKU
XRRA1
WDR38
SPCS2
RPL35
ARPC5L
NCOA3
ACSS1
HMGB1
DGLUCY
USPL1
E2F6
KANSL3
FER1L5
BRICD5
MTBP
MRPL13
H3C6
H2BC8
H2AC8
TSPAN4
POLR2L
CD151
SAP30BP
RECQL5
ABTB2
RMND5B
SPATC1L
TESC
ARNTL
METTL25
CCDC59
PNPO
RNF103-CHMP3
RMND5A
ZNF609
NOCT
BZW2
ANKMY2
FAM72D
LIN54
PRDM10
NOL8
UBE2C
ZCCHC4
STK35
CDIPT
ZBTB3
CDON
USP3
TMEM160
MAPK6
PLP2
MAGIX
STIP1
MRPS31
TRIP4
PCLAF
PDE6A
DBP
CA11
TRAPPC6B
PNN
OXR1
FAM227A
CBY1
SHKBP1
FANCI
SLA2
NUCB2
UBE2B
GATAD2B
CDKL3
TMEM260
C6orf226
PROSER3
LIN37
HSPB6
ZFAND3
DPY19L4
DPP9
PIP4K2B
E4F1
SSBP1
FGFR4
KAT7
MRPS11
MRPL46
RASSF7
LMNTD2
DRAP1
C11orf68
PSMD14
C21orf91
RBM7
C11orf71
PITPNM1
ZNF335
KRT19
KRT15
TRAPPC9
PSIP1
CASKIN1
CABP7
LUC7L2
DNAJA4
SRI
RBM39
LAD1
ANKRD39
PRRC2B
TNS2
SLC25A42
TP53BP2
HNRNPL
LYSMD2
ZNF8
FAM83D
FRMD5
NDUFB1
CPSF2
TTLL7
CNP
HDAC2
TEDC1
HBD
HBB
SYVN1
LEPROT
LEPR
ARAF
UFSP2
C4orf47
CYP2R1
SMIM35
THOC1
TMOD2
DISP3
NCDN
KIAA0319L
WASHC5
NSMCE2
STK32C
LRRC27
SLC5A1
STX18
KANK1
TTC9B
SRPK2
CCNP
ANKRD12
TCP11L2
LRR1
RPL22
RNF207
MIA2
KPNA2
ANP32B
RRBP1
TES
RELA
PRCP
DDIAS
SULT1A4
SULT1A3
SLX1B
SLX1A
BOLA2B
BOLA2
PRDX1
ZNF3
COPS6
TARDBP
HHIPL1
CCDC85C
ATAD2
RNASEK
RABGEF1
C17orf49
H3C15
H3C14
FYN
ARHGEF19
H4C14
PRR3
GNL1
TBC1D14
CLDN12
RAB33B
UBA1
TMPRSS3
MRPL21
IGHMBP2
TEPSIN
NDUFAF8
SS18
LANCL2
STXBP3
DNAJC14
SLC38A2
ALDH3B1
ARHGAP19
MRPL20
CCNL2
TOP2A
C6orf62
SHROOM1
GLIPR1L1
CAPS2
TBC1D17
PNKP
AKT1S1
TSPAN8
ITGB8
ZNF180
UBE2A
CXorf56
CNOT3
GTF2IRD2
ANP32A
RUVBL1
ZFAND4
HSP90AB1
H2AC19
H2AC18
UQCRC2
OTUD7B
RPN2
MROH8
C2orf42
PLPP2
FMN1
PPP1R13L
POLR1G
FAM228B
NUP107
UQCRQ
LEAP2
GDF9
MBNL1
ATP8A1
SELENOH
PTPRH
PIF1
CCDC85B
INTS12
GSTCD
HECTD2
ZNRF3
ADAP1
WRAP53
TP53
MGRN1
ZNF572
PSMD6
BOLA2-SMG1P6
TSC22D1
H2BC15
H2AC15
TMEM167B
TANGO2
ARVCF
SP2
ACAP2
ATP5PD
MSANTD4
ZMYM5
PRR15L
FMC1-LUC7L2
FMC1
OGDH
FBXO5
ETV4
SSNA1
ATF7-NPFF
ATF7
ANAPC2
TMBIM4
PCYT1A
UGT2B7
OSBPL2
CBX5
CNOT1
POLR2J3
RUBCNL
NBEAL2
CCDC12
TMEM45A
RASEF
PTPRA
ARHGEF38
EFNA4
TBRG4
OTOGL
BAZ1B
PTP4A2
MYBL2
TRPV4
EIF1AD
CST6
BANF1
ATP5MC1
TMEM168
PSPN
ALKBH7
PRR7
DUSP6
HYAL1
VTCN1
RPS3
NFE2
HPS5
GTF2H1
CENPE
RPL19
CACNB1
MRPS23
SEPTIN9
BCAS3
MRPL40
HIRA
HDAC1
TRIM37
RRM2
GTF2IRD2B
TLE3
TMEM94
OPA1
USP17L21
USP17L12
PPM1D
LSG1
CALU
UBALD1
CALR
BCL2L1
NFYC
ADPGK
SPRYD3
INAVA
SLC35B2
NFKBIE
MADD
HNRNPUL1
FZR1
FRMD6
DOHH
KCNK4
GPR137
BAD
SORT1
ZMYM2
SLC24A1
GTF2H2
RNF43
RDH12
RDH11
UTP18
MBTD1
TP53I3
SF3B6
UXS1
FAM20B
CLTC
TSKS
AP2A1
SOD2
SKA2
PRR11
H2AZ2
PELATON
ABHD2
EMSY
DCLRE1B
AP4B1
SRCIN1
OLFML2A
NR6A1
SERTAD1
RNF6
SLC44A1
SLC11A2
H4C15
SMC3
PCYOX1L
HACD3
FDFT1
PEX3
ADAT2
SASH1
MTCH1
GOLGA6L4
KMT2E
CBWD5
EIF2AK3
ZNF484
MCM7
DYNC2I1
AP4M1
MYO19
GGNBP2
PRR14
FBRS
TMEM258
PDK2
FEN1
MAST4
KMT5C
TUBD1
RPS6KB1
RBM42
TUBB4B
FAM166A
SLC25A10
MRPL12
LRCH4
FBXO24
FAM86B1
CEP63
ANAPC13
MTSS2
GIPC1
ACVR1B
SSR3
HNRNPA1
SIRT2
NFKBIB
ZKSCAN1
MACC1
COMMD2
PRKACA
PDE8B
MRPL45
CNNM2
CBWD3
CANX
FZD1
UFD1
CDC45
BACE1
UBC
SCP2
TAF13
PRKAB2
CHD1L
ZNF519
ATG9B
ABCB8
C20orf204
COA1
TFPT
PRPF31
UTP23
SFXN5
ATP5F1E
GET3
FBXO32
SF3A3
TMED9
GPR84
B4GALT7
SREK1IP1
SHF
LYRM1
DCUN1D3
CWC27
CD164
SORBS3
MIA3
LEMD2
H4C9
H2BC12
H2AC12
FARSA
ARHGAP39
YWHAQ
RAB28
SNX17
EIF2B4
FMO5
PDIA4
ZNF687
PXMP2
POLE
NME1
VMP1
TMCC3
PTRH2
LMCD1
RAD23A
RAC3
FBXO33
CNPY3
NREP
PTCD3
POLR1A
EEFSEC
CUEDC1
TESK2
MMACHC
TREH
ZNF574
TADA3
DIAPH1
ARPC4-TTLL3
ARPC4
NDUFS7
ZNF300
TRAF2
IFT46
ARCN1
NOL11
GOLGA6L3
HMGCR
MAP11
PRORP
PPP2R3C
TOM1
AQP5
NHLH1
DICER1
ARID2
VIRMA
TMEM229B
CSPP1
COPS5
SRSF7
MPP7
MGLL
LRRC37A3
ZNF862
RPL26L1
RWDD1
ISOC2
DERL1
ANKHD1-EIF4EBP3
ANKHD1
RBM28
PARD6B
COQ8A
SUPT4H1
RPS11
RPL13A
ODC1
LMOD3
PSMG2
IVD
CDK12
ARHGAP27
UGP2
STEAP2
TBC1D30
HLF
NFIB
MTMR14
INTS5
ECHDC2
SCAND1
NLK
B3GALT2
GTF2H2C_2
GTF2H2C
THUMPD1
DENR
HEXIM2