ChIP-Atlas: Target genes

Potential target genes for SOX9

Query protein: SOX9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX4065346 | hESC derived retinal cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
SOX9's Target genes

◢ SOX9: Average

◢ SRX718108: hESC derived pancreatic cells

◢ SRX4065343: hESC derived retinal cells

◢ SRX4065344: hESC derived retinal cells

◢ SRX4065345: hESC derived retinal cells

◣ SRX4065346: hESC derived retinal cells

◢ SRX4065347: hESC derived retinal cells

◢ SRX4065348: hESC derived retinal cells

◢ SRX11220467: HT-29

◢ SRX11220468: HT-29

◢ SRX768290: HT-29

◢ SRX11416753: KARPAS-422

◢ SRX11856133: LNCAP

◢ SRX11856134: LNCAP

◢ SRX11856137: LNCAP

◢ SRX11856138: LNCAP

◢ SRX11856139: LNCAP

◢ SRX11856140: LNCAP

◢ SRX11856141: LNCAP

◢ SRX11856142: LNCAP

◢ SRX359919: LoVo

◢ SRX10175282: PANC-1

◢ SRX10175283: PANC-1

◢ SRX1510444: VCaP

◢ SOX9: STRING

MAMDC2
TRIM48
DUX4
HBD
HBB
SNX16
PMF1-BGLAP
PMF1
ARRDC4
DOLPP1
PTPRN2
LOC102724770
DGCR6
MTRNR2L2
MSH3
DHFR
MTRNR2L1
ZBTB32
TPBGL
ZNF114
HMGCS1
SLC25A41
KHSRP
HRK
PALM2AKAP2
FAM72C
FAM72A
KAT7
MTRNR2L8
GJD3
KCTD12
CLDN9
MICAL3
FAM72D
SLC35E2B
PAX8
FRG2C
BCL9L
PKDCC
TINAGL1
SLC35E2A
KIF5C
FRG2
POR
RORC
C2CD4D
SNAP29
PI4KA
RGPD2
RGPD1
MUC3A
TAF15
NOXO1
PBX2
GPSM3
POLG
ART1
PARK7
PHRF1
COL23A1
TBL3
SYNGR3
GFER
SH3KBP1
IQCH
AAGAB
PDXDC1
PRKCI
WDR74
STX5
PPDPF
KLK6
PPIB
SDF4
B3GALT6
FAM53C
CDC25C
PGBD4
EMC7
C1QTNF12
NOP56
OGA
RNASEH2A
PRDX2
CDYL
GIT2
ANKRD13A
CCDC200
DAB2IP
LRRC75B
GGT1
EIF3B
MTF2
PFDN4
KIF12
CNOT6
LZTS2
RHBDD3
EWSR1
PTDSS1
MTERF3
PIK3R3
ARL4D
FRAT2
AKIRIN1
LSR
EED
SMIM41
ATG101
RNF13
PCDH1
SLC35A5
ATG3
TECR
DNAJB1
DLST
MYO9B
HAUS8
GNB2
MTRNR2L9
ATG16L2
WDR97
MAF1
CYC1
PRR19
PAFAH1B3
MRPS24
NOTCH1
YY1AP1
DAP3
IQCE
NDST2
SEMA3B
COMMD6
SOWAHA
MYL12A
ETV2
COX6B1
KCNH8
LAMB3
PTOV1
ZNF775
CDCA7L
BCL6
USP15
RAB4B
MIA
UCHL3
TMEM129
TACC3
SLBP
ACSS1
CMC2
CENPN
UIMC1
FOS
PMVK
TSPAN4
POLR2L
CD151
BZW2
ANKMY2
WASL
TMEM63A
LEFTY1
UBE2C
PLEKHB1
UROS
BCCIP
FUS
DNMT1
UNKL
C16orf91
CDON
CNFN
FLCN
TMEM160
ZNF285
DBP
CA11
PAXIP1
FAM72B
ZNF229
TESC
STK35
ETNK1
PGP
PRKDC
MCM4
HMX2
FRAT1
TAF6
MBLAC1
CNPY4
STIP1
ZNF219
TMEM253
BRICD5
TNNI3
DNAAF3
SETD5
RASSF7
LMNTD2
C21orf91
RBM7
C11orf71
PNPO
PITPNM1
NOL8
CENPP
UBE2B
CDKL3
LIN54
SELENOW
WDR38
RPL35
ARPC5L
PSIP1
PDE8A
PROSER3
LIN37
HSPB6
SHKBP1
IRF2BP2
HMX3
MRPS11
MRPL46
SPTBN1
TIGD5
EEF1D
MYL12B
CIC
XRRA1
SPCS2
IL17RB
CHDH
FRMD5
EPN1
PIP4K2B
ZNF335
MYH14
WWP2
ARAF
FOSL1
CYP2W1
COX19
UFSP2
C4orf47
CASKIN1
DGAT2
SLC5A1
TTC9B
SPATC1L
PLP2
MAGIX
CCNP
BTNL9
MTBP
MRPL13
PLEKHG4
PRDM10
TMEM242
TARDBP
HHIPL1
CCDC85C
C6orf226
ZNF8
HNRNPL
METTL25
CCDC59
RNASEK
C17orf49
TRNP1
UBA1
PPP5D1
CALM3
SYVN1
TTLL7
ARNTL
MRPL20
CCNL2
FAM83D
ARHGEF1
FANCI
CDIPT
TOP2A
PSMD14
TRAPPC6B
PNN
OXR1
ATP6V0C
AMDHD2
ZFAND3
ZNHIT1
PLOD3
RPL22
RNF207
HDAC2
TP53BP2
RPN2
MROH8
TRIP4
PCLAF
RRBP1
ITGA6
PRCP
DDIAS
PPP1R13L
POLR1G
UQCRQ
LEAP2
GDF9
PRR3
GNL1
ADAP1
DPP9
WRAP53
TP53
CCDC9B
LUC7L2
E4F1
TEPSIN
NDUFAF8
TBC1D17
PNKP
AKT1S1
STX16
SLC25A42
TANGO2
ARVCF
MSANTD4
PRR15L
SS18
RNF103-CHMP3
RMND5A
ABHD11
DISP3
MYT1
CNOT1
TRAPPC9
TMEM143
SYNGR4
H3C15
H3C14
TMEM45A
H4C14
UQCRC2
ANKRD12
PSPN
ALKBH7
TNS2
SLA2
TNRC18
NOCT
LOC100129484
CENPE
RPL19
CACNB1
WASHC5
NSMCE2
TCP11L2
RMND5B
CNOT3
HDAC1
THOC1
CYP2R1
CFDP1
UCKL1
RRM2
NUCB2
MRPS31
USP3
H2AC19
H2AC18
RELA
ACAP2
NFYC
ABTB2
ADAMTS9
FZR1
DOHH
EAPP
SRI
ZMYM2
SP2
UBE2A
CXorf56
NDUFB1
CPSF2
C6orf62
TSKS
AP2A1
OLFML2A
NR6A1
STK32C
LRRC27
NCDN
KIAA0319L
SPAAR
HRCT1
TMPRSS3
FGFR2
NWD1
LANCL2
MAT2A
MYO19
GGNBP2
PTP4A2
ANP32A
TMEM260
TUBB4B
FAM166A
RBM39
ATP8A1
GTF2IRD2
HNRNPA1
CBX5
ZNF609
MACC1
PRKACA
UFD1
FMC1-LUC7L2
FMC1
CDC45
SSBP1
FBN3
SOD2
ZNF519
GPR84
SMC3
SHF
HMGB1
PIF1
CCDC85B
MIA3
LEMD2
C2orf42
PPP6R1
ATP5PD
SULT1A4
SULT1A3
SLX1B
SLX1A
BOLA2B
BOLA2
USPL1
SSNA1
PTPRH
FGFR4
ANAPC2
H4C15
STXBP3
MIA2
LY6L
ANKRD39
FMN1
ZNF300
TRAF2
OGDH
ARHGEF19
ZFAND4
ODC1
ATP5MC1
OTUB2
ATAD2
PELATON
H3C6
H2BC8
H2AC8
TLE3
GTF2IRD2B
SERTAD1
SELENOH
ZMYM5
HNRNPUL1
ZBTB3
POLR2G
HECTD2
PRKAG2
BAZ1B
RASEF
TTYH3
SKA2
PRR11
CD164
KIF1B
ATF7-NPFF
ATF7
UTP23
CSNK2A1
ZNF572
TMEM168
VBP1
TSKU
RBM42
LEPROT
LEPR
KIAA0895
VASP
RAB33B
AK2
LRCH4
FBXO24
ECPAS
CABP7
MRPS10
PELI1
OSBPL2
FAM228B
BAZ2A
ATP5F1B
SMARCD2
FAM227A
CBY1
CCT5
ATPSCKMT
FBXO5
PANK2
MADD
SPATA20
FAM227B
EPN3
DTWD1
RABGEF1
UTP18
MBTD1
ARHGEF38
NCMAP
ISOC2
E2F6
FARSA
CALR
KCNAB2
UBALD1
STPG3
MGRN1
FRMD7
BOLA2-SMG1P6
SMARCAL1
KATNB1
ZNF687
NUF2
INAVA
SCP2
RTKN
OPA3
EIF2D
ASH1L
GIPC1
FAM110A
CSPP1
COPS5
HDGFL2
GOLGA6L3
CDK16
ZCCHC4
NLK
COQ8A
KCTD7
PAIP2B
NRARP
TMEM218
EFR3A
LGR6
ZNF574
TES
RNF6
PIGW
ANKHD1-EIF4EBP3
ANKHD1
LRPPRC
KMT5C
MRPL21
IGHMBP2
PTMA
EFNB2
RGS19
PLPP2
OPRL1
LKAAEAR1
TUSC2
HYAL2
HYAL1
ZNRF3
MOCS3
DPM1
SIGMAR1
GALT
GOLGA6L10
SREK1IP1
PDK2
CWC27
H2AZ2
PLAG1
CHCHD7
MRPL45
LRATD2
NOTCH2NLC
WDR62
THAP8
CKAP5
PRR14
NOC4L
FBRS
DDX51
BCL2L1
PTCD3
POLR1A
NOTCH2NLB
NOTCH2NLA
TFPT
PRPF31
OSBP
ARHGAP19
OSGIN1
HOMEZ
GOLGA6L9
SPTBN4
POLR2J3
GGCT
CBWD5
PPFIA3
LIN7B
C19orf73
ALDH4A1
PRRC2B
ATG9B
ABCB8
ITGB3BP
EFCAB7
NECTIN3
TTF1
TMTC4
CFAP77
EIF2AK3
SF3A3
COA1
FSIP1
TTBK2
PRR25
KANSL3
GNG13
FER1L5
ZBED6CL
LRRC61
ACTR3C
SLC34A3
ECHDC2
MTCH1
AURKAIP1
SRXN1
IVD
KANSL1
DOT1L
ALDH3B1
ADPGK
TADA3
ARPC4-TTLL3
ARPC4
KLF5
MPHOSPH8
CANX
STX18
NUP107
WDR45
CBWD3
RAB28
MEIS1
UNG
TPBG
HBP1
ATP5IF1
ALKBH2
NBEAL2
CCDC12
LSG1
KRT19
KRT15
HNRNPC
GOLGA6L4
ANLN
PRMT1
DIAPH1
CWC25
TMEM209
SUN3
SSMEM1
RAB7A
C7orf57
CENPA
RLN2
RAD23A
PLEKHG5
CALU
NDUFS3
KBTBD4
FAM180B
EIF3F
DNAJC14
KLF6
SEPTIN9
PTCD2
MRPS27
DIAPH3
CDK5RAP2
RB1
XPA
MAMDC4
AJM1
RPS11
RPL13A
YJU2
PPWD1
MZT1
KANSL2
IFT52
FANCF
ETV4
CENPK
BORA
MTMR14
TP53I3
SF3B6
SASH1
GTF2H2
ABHD2
LIPE
ZNF484
TRPM4
HRC
RBM27
ZSWIM1
SPATA25
CTSA
AAR2
SLC24A1
SRCIN1
CNPY3
SUPT20H
VPS37B
USP31
FCHSD2
CHCHD6
PAK4
TRIM29
PRDX1
SPRYD3
FRMD6
GNG3
GATAD2B
FBXO33
BSCL2
ZSCAN22
SP1
C1orf198
PKNOX1
PDE6D
COPS7B
TYK2
MBD1
CXXC1
NPL
RAVER1
ICAM3
RBM28
PSPH
CCT6A
ZBTB45
POLR3B
ZNF862
SCAND1
FDFT1
MED23
LDHA
RUVBL1
NF2
CEP63
ANAPC13
TOM1
SH3TC2
MRPL23
HIBADH
PLXNA3
MRPL40
HIRA
TMEM39A
POGLUT1
ANXA2
HGS
DENR
ARL16
SIRT2
NFKBIB
CLP1
ZNF77
RAC3
PAQR4
KREMEN2
CEP164
RUVBL2
PLA2G7
MAMSTR
GYS1
FOXA2
GLIPR1L1
CAPS2
NAT10
SUPT4H1
AFF1
ETV6
DYNC2I1
ATP5F1E
TSPAN31
HSCB
CHEK2
CDK4
MTMR12
GTF2H2C
GTF2H2C_2
COMMD2
ANKRD17
SNX17
PDIA4
EIF2B4
ZSWIM4
SLC46A3
LMTK2
HEXA
FAAP24
CEP89
PPP3CA
DAZAP2
ADGRA1
RMI1
OTUD7B
MYBL2
MCIDAS
INTS12
HNRNPK
GSTCD
DGCR8
BMP5
TBC1D14
SPATA17
GPATCH2
G3BP1
CTDP1
ZNF564
KMT2E
BCAS3
H4C12
H4C11
H2BC15
H2AC15
CUL2
NDUFS7
ANKZF1
RLN1
CCNB2
UQCRH
STAT1
MAOA
LRRC41
GOT1
GALK2
COPS2
DRD4
RBM48
PEX1
LAMP1
SLC45A4
CCDC102A
ADGRG5
ARID3C
SHC1
RPS19
NOL7
FLAD1
CKS1B
MRPL44
ACAT2
USP17L20
CDC42BPG
SHOC2
BBIP1
ACTN1
VAMP2
PER1
F11R
WDR36
USP17L22
SRPK2
RPS29
RITA1
DDX54
ALKBH3
BICD2
NARF
DCUN1D4
CYBC1
SPTLC2
SPATA5L1
GATM
PXMP4
TATDN1
NDUFB9
LENG1
GBA
TTC26
DPY19L4
DRAP1
C11orf68
MRPS23
RWDD1
ENSA
UBR7
GON7
SKA3
MRPL57
ERCC1
JPT2
FRY
ZNF143
UBAP2
KLC2
PCNX3
PABPN1
MAP3K11
H4C9
H2BC12
H2AC12
WDR11
SLX4IP
MKKS
RBBP6
LYRM1
FAF1
DCUN1D3
CDKN2C
SDHAF1
PGBD2
CBWD6
RFX1
PROM1
BUB1B
RNF139
PRKCZ
ZNF584
YIF1A
TMEM151A
EIF1AD
CST6
BANF1
MAP1LC3B
FBXO31
MMP8
ARHGEF5
RPS2
RNF151
WDR61
SPSB3
SC5D
OBP2B
NUBP2
MRPS34
EME2
METTL3
TRIP10
TMEM262
GPR108
FAM98B
PPP4R3B
GFM2
ERCC5
CLK3
TARS1
CPSF4L
CDKN3
TESK2
MMACHC
CCDC77
PRR5L
COMMD9
ARL14EP
HMGCR
STRIP1
MICAL2
HACD2
PTPN6
GTF3C3
C2orf66
C12orf57
PLD3
C19orf47
RNF225
RCL1
ISG20
ENPP5
ZNF513
FRA10AC1