ChIP-Atlas: Target genes

Potential target genes for SOX9

Query protein: SOX9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX11220468 | HT-29
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX9's Target genes

◢ SOX9: Average

◢ SRX718108: hESC derived pancreatic cells

◢ SRX4065343: hESC derived retinal cells

◢ SRX4065344: hESC derived retinal cells

◢ SRX4065345: hESC derived retinal cells

◢ SRX4065346: hESC derived retinal cells

◢ SRX4065347: hESC derived retinal cells

◢ SRX4065348: hESC derived retinal cells

◢ SRX11220467: HT-29

◣ SRX11220468: HT-29

◢ SRX768290: HT-29

◢ SRX11416753: KARPAS-422

◢ SRX11856133: LNCAP

◢ SRX11856134: LNCAP

◢ SRX11856137: LNCAP

◢ SRX11856138: LNCAP

◢ SRX11856139: LNCAP

◢ SRX11856140: LNCAP

◢ SRX11856141: LNCAP

◢ SRX11856142: LNCAP

◢ SRX359919: LoVo

◢ SRX13867212: MCF-7

◢ SRX13867213: MCF-7

◢ SRX13867216: MCF-7

◢ SRX13867217: MCF-7

◢ SRX10175282: PANC-1

◢ SRX10175283: PANC-1

◢ SRX1510444: VCaP

◢ SOX9: STRING

PAX8
TINAGL1
PKDCC
BCL9L
SH3KBP1
RORC
C2CD4D
ACSS1
SDF4
B3GALT6
C1QTNF12
PBX2
GPSM3
KLK6
KCNH8
NOXO1
SYNGR3
GFER
TBL3
MTF2
CDYL
KIF12
PPDPF
LAMB3
CCDC9B
UNKL
C16orf91
SLC35A5
ATG3
RBM7
C11orf71
LZTS2
FRG2C
LRRC75B
GGT1
HMX2
HMX3
SEMA3B
PDE8A
XRRA1
SPCS2
PLEKHB1
DAB2IP
PCDH1
TMEM63A
LEFTY1
MAMDC2
TP53BP2
NOTCH1
SNAP29
PI4KA
RTKN
CCDC200
NRARP
CFDP1
MYH14
PSMD14
SOWAHA
ARHGEF1
ETNK1
TECR
DNAJB1
ARL4D
IL17RB
CHDH
HECTD2
LEPROT
LEPR
WDR74
STX5
PLEKHG4
ECPAS
ITGA6
TMEM168
SPTBN1
RAB33B
FGFR2
FRMD5
CYP2W1
COX19
PNPO
PRR15L
MTBP
MRPL13
ZNHIT1
PLOD3
TESC
TMPRSS3
RASEF
RBM39
TRNP1
ZNF572
THOC1
RELA
SLC5A1
OTUB2
TMEM129
TACC3
CNFN
SLBP
TRAPPC9
E2F6
IRF2BP2
TNS2
ADAP1
ARHGEF19
SCP2
ECHDC2
STK32C
LRRC27
ATAD2
STXBP3
PPP6R1
TLE3
FRMD7
FRG2
COL23A1
TAF15
ABHD11
TTYH3
POR
RB1
NBEAL2
CCDC12
OGA
GCA
IFIH1
FBN3
SSBP1
USP1
PRDX1
POLG
ERBB2
RHBDD3
EWSR1
PIP4K2B
FMN1
ITGA2
PELI1
CDC42EP3
SLC35E2B
SHF
LDHA
PPP4R3B
RAB4B
MIA
TMEM143
SYNGR4
KRT19
KRT15
MUC3A
SLA2
FOXA2
H3C6
H2BC8
H2AC8
RRBP1
UQCRQ
LEAP2
GDF9
SLC26A8
MAPK14
COBLL1
TMEM209
SSMEM1
PARK7
XKR8
TSKU
FGFR4
MCIDAS
CCNO
EFR3A
KANSL3
FER1L5
CDK12
OBP2B
ARHGEF17
DUX4
VASP
WWP2
PTPRH
ABTB2
SEPTIN7
LSR
MIA3
SRCIN1
GORASP2
RAD21
RAI1
SUPT20H
MYO19
GGNBP2
PIGW
MRPL45
AP3B1
LCN2
IQCH
AAGAB
DDR1
NOL7
KMT5B
PAQR4
KREMEN2
PHYHIP
USP3
NCMAP
SC5D
UTP23
NPL
DNAJA4
XPA
RUNX1
RTN3
ATL3
CABP7
SEPSECS
NUF2
ZNF385C
PDP1
SDHC
MPZ
KLF4
STAT3
TES
RNF139
TMEM65
TNFRSF21
PBLD
HNRNPH3
SH3TC2
ARHGEF5
RGS3
LYPD3
NDST2
CPSF4L
RPL26L1
TATDN1
NDUFB9
ESCO1
LMO7
PELATON
CCNI
RABGEF1
LRRC6
ADAMTS9
ARHGEF38
RPS19
SOX8
LMF1
PPP1CB
BICD2
ZNRF3
PLA2G2E
ZBTB38
SMARCD2
SPATA20
ZNF862
EPN3
CDC5L
UIMC1
ARHGEF7
PSMD5
ACOT4
GNB2
FAM227B
DTWD1
EIF1AD
CST6
BANF1
SMC4
IFT80
ZMPSTE24
TMCO2
TNRC18
LOC100129484
TACSTD2
MAT2A
ZNF609
LAMTOR5
C21orf91
PLPP2
TTC23L
IGSF10
LSG1
MRPS10
MDH1
WDPCP
TM2D3
SDHAF1
SIPA1
EAPP
MAN1A2
SLC30A3
KANSL2
OTUD7B
SPHK2
RPL18
FAM83E
SHOC2
BBIP1
TSC1
GFI1B
SKA3
MRPL57
MEF2A
WDFY2
ARL10
PLXDC2
PAK4
TARS1
PDE4DIP
MACC1
GATM
SPATA5L1
PFDN4
HBP1
RNF169
SPTBN4
HGS
ARL16
ARID3B
NSFL1C
PPP1R12A
NANP
EIF4G2
DNAJC24
DCDC1
HMGB1
USPL1
ARID2
MRPL33
LENG9
CDC42EP5
MYL12A
MYL12B
SLC35B4
ERCC6L2
SFMBT1
WDR36
MTIF2
IREB2
POP5
CYP2R1
ITGB3BP
EFCAB7
CLTC
TBC1D30
ETV6
EID1
PRKCI
SLC44A1
WDR61
NPNT
PTDSS1
MTERF3
GIT2
ANKRD13A
VMP1
PTRH2
SRSF7
ZNFX1
RNF43
ZCWPW1
PPP1R35
MEPCE
G2E3
DDX52
ANKRD35
FAM133B
PGBD2
RAB30
CCS
CCDC87
ZNF425
ZNF398
TMEM41B
COMMD6
MRPS31
GBA
ADNP
ZNF143
GSK3A
ASCC1
ANAPC16
C1orf74
RNF103-CHMP3
RMND5A
PSMC4
PTPN4
ZNF473
VRK3
RPL12
LRSAM1
C17orf58
NPTN
NF2
PPP1R11
POLR1H
RNF39
TPP2
WASL
OGDH
CYRIB
MTERF1
PTPN2
CPSF6
WEE1
GLIPR1L1
CAPS2
TRPV4
SSR3
CCN2
HNRNPA2B1
CBX3
MRPS33
LOC101928764
CYP2B6
USP15
ACAP2
EFNA4
PLOD2
ERCC5
SRP19
ORC5
AATF
BUD13
PRR19
PAFAH1B3
SLC24A1
MLEC
ERCC1
GPR15
CLDND1
LRATD2
CDCA7L
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
NOL11
NECTIN3
EHBP1
TIAL1
LIN7C
CDADC1
ZBTB45
AAR2
TRIM28
SCAND1
KLHL7
SNX5
MGME1
IRF6
ZCCHC4
UBE2B
CDKL3
GALK2
FZD1
STYXL1
MDH2
COPS2
BTG1
BTBD10
CCDC97
DNAJC27
TBC1D31
KLF5
CLN5
USP47
PPP1R9B
ZNF189
MRPL50
ZNF180
UBC
USP48
RPS6
MYO5C
PRORP
PPP2R3C
PYCR1
MAFG
SIRT7
ZNF576
IRGQ
OTULIN
ZNF622
SPTY2D1
KPNA4
N4BP2L1
ALDH3B1
COMMD2
NCSTN
COPA
DIAPH3
TMEM39A
POGLUT1
TTC32
CCDC15
OSER1
PPIB
IQCE
EIF2AK3
RCL1
RPL27A
SERP1
EIF2A
TRNAU1AP
TBPL1
MTHFR
CLCN6
PBX3
CARNMT1
TRMT1L
SWT1
FAM200B
NDUFA5
USP53
PRRT3
NET1
METTL25
CCDC59
DENR
CFAP20
STAT1
FRY
ZNF777
STYK1
OTOF
FAM166C
MRPS24
PPP5D1
CALM3
PRKAB2
CHD1L
NREP
TRIM29
GTPBP10
WBP1
INO80B
POLR1F
CCNH
RPS7
UBE2I
MVB12A
NMI
OR4N4
ZBTB3
SNX17
EIF2B4
POLR2G
ZNF513
PON2
TAF6L
MSL2
TMEM126B
DLG2
MANBAL
ADPGK
MAST4
TMCC3
PGM2L1
LGALS8
TBC1D14
SLC50A1
EFNA1
CEP120
PPIC
TUT1
MTA2
MIGA1
NDUFB4
INTS12
GSTCD
MCRIP2
WFIKKN1
METTL26
TENT5A
SREK1
PRCP
DDIAS
SELENOH
CTR9
TTC13
ARV1
IPMK
CISD1
ADSS2
FAM98B
CATSPERE
ALDH18A1
KLK7
KIF5B
STK38L
EIF3B
ZFAND3
SREK1IP1
CWC27
PTMA
MGAT4B
ELF1
SQSTM1
RPS3A
PTPN13
RPL6
PTPN11
WBP4
CEP63
ANAPC13
PARP4
ARID1A
SRCAP
LOC730183
PIGF
CRIPT
SNX1
CIAO2A
WASHC5
NSMCE2
RPL22L1
CD2BP2
PRKAR2A
DNAJC14
EMSY
CHD2
STRIP2
PLEKHA1
SMARCA5
GTF2IRD2
BAZ1B
GTF2IRD2B
SMC3
ARL14EP
FAM91A1
XAB2
STXBP2
PCP2
ACYP2
SMIM12
AGBL3
RNF135
RABGAP1
CALM2
ECT2
ZBTB26
POC1A
SMARCAL1
PLEKHF2
EFCAB2
CNBP
HSD17B12
ETFA
SOWAHC
SEPTIN10
TFPT
PRPF31
SRP9
NCOA5
RPS13
GSDMD
HILPDA
PMPCA
ENTR1
SHKBP1
CHCHD3
PTK2
SLC39A8
JAG1
DOCK9
RAB10
CDK11B
CDK11A
POT1
OXR1
STX18
NUP107
NUDT16
SERPINI1
PDCD10
C19orf48
SECISBP2
CKS2
CEP135
SPTLC1
EHD4
FNDC3A
DYNLRB1
FRAT2
PTOV1
TMEM260
ATF7-NPFF
ATF7
MRPS18C
HELQ
ZNF644
DNAJC25-GNG10
DNAJC25
METTL2B
COG7
SLC30A6
DCBLD2
KIFAP3
ITGB6
CYP51A1
NUP54
WDR93
PEX11A
HES6
MATR3
RALA
BCL6
PRR25
GNG13
COL9A3
ZNF25
NMT1
DCAKD
RBM12
CPNE1
ANAPC4
PRPF38A
ORC1
RNF32
NECTIN2
RPN2
MROH8
CD55
TTC30B
SPATA9
RHOBTB3
THAP10
LRRC49
MFSD14A
DCT
LIPG
MSANTD4
TTC26
MICU2
SCAF11
ITPKC
COQ8B
LDHB
SVIP
NEPRO
SLC35E2A
FZD6
TRMT2A
RANBP1
LRRC58
RPL5
UBQLN4
RAB25
LAMTOR2
CCZ1B
ZNF285
FANCI
PPP1R13L
POLR1G
PDIA4
PPME1
C2CD3
TGFBRAP1
DCP1B
SMYD3
NUB1
C2orf49
ZBTB37
DPH5
XRCC5
CLDN9
METTL9
GFM2
NUP42
CLDN6
JRKL
CCDC82
PSMA1
FBXO48
APLF
PDXDC1
UROS
BCCIP
CBWD5
CBWD3
CBWD6
CCNL1
GARS1
ZDHHC24
ACTN3
CDK13
THADA
EREG
ABCF1
SEC22A
CLCF1
MAL2
LYPLAL1
ATG101
SMIM41
SZT2
MED8
TRIB1
TMEM222
ZNHIT2
MRPL49
FAU
SPACA9
AK8
WDR75
UBR7
GON7
PEX12
AP2B1
TAF10
RRP8
ILK
GSPT1
TPP1
COG6
KCNJ14
GRWD1
C4orf36
PRPF4
PRKN
PACRG
NOP58
CDC26
FAM228B
H2BC15
H2AC15
PLD3
C19orf47
H4C12
H4C11
NUDCD1
PFN4
GSTO2
RTN4
RNF103
IFRD1
CHPF2
ABCF2-H2BE1
ABCF2
GPR160
STX16
PSPH
CCT6A
PIGBOS1
PIGB
MED4
UFM1
APBB2
C6orf62
TMBIM4
MRPL40
HIRA
RNF6
VIRMA
RWDD1
SLC25A32
DCAF13
NUDCD3
PPP1R10
MRPS18B
ATAT1
GFM1
VAC14
ELL2
ARNTL
RPS11
RPL13A
PCNX3
MAP3K11
EIF2AK1
ZNF584
MMAA
PPIL2
EEF1AKMT1
ZBTB20
TRAK2
STRADB
RAB3C
HERC1
COPG1
IKBIP
APAF1
DIS3
INTS13
FGFR1OP2
SRSF3
KPNA1
FPGS
UCHL3
WDR11
FAM110A
XPO1
EIF4A2
RNF115
POLR3C
ZNRF2
SLC39A10
CEP126
ANGPTL5
DUSP10
EMC2
FAM76B
CEP57
IGF2BP3
WWOX
UQCRC2
TSPAN31
CDK4
THAP5
CYTH2
DNAJB9
AMN1
MARCHF9
TRA2B
NDFIP2
MYNN
ACTRT3
MRPS23
TMEM41A
LEKR1
ZBTB11
PLEKHA8
FKBP14
EFHC1
RPL24
SECISBP2L
UGDH
MET
DNTTIP2
TMEM126A
TRIP6
SRRT
UTP3
SAP18
HSPA5
SRP14
TSG101
MYO1G
LOC100287896
LIPT2
IRX2
C5orf38
SPRED1
FAM53C
CDC25C
MTHFD2L
SRFBP1
NXF1
ZNF672
KCTD12
WDHD1
SOCS4
CCNG2
CMC2
CENPN
TMEM242
LANCL2
PPM1D
MOB4
RBBP6
RTTN
CROT
C8orf76
FDXACB1
C11orf1
ALG9
KRIT1
ANKIB1
MED30
LFNG
DESI2
SHOX2
RCHY1
RSRC1
UBB
TAGLN2
UBN2
AMOTL2
CDK8
ZC3H15
TOMM7
NHLRC2
DCLRE1A
TTC8
STPG2
SPDL1
RBL1
ZNF335
EHF
ZNF764
COX18
ARNT
GSK3B
LINS1
ASB7
UGGT2
MRPL17
NUP205