ChIP-Atlas: Target genes

Potential target genes for SOX9

Query protein: SOX9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX11220467 | HT-29
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
SOX9's Target genes

◢ SOX9: Average

◢ SRX718108: hESC derived pancreatic cells

◢ SRX4065343: hESC derived retinal cells

◢ SRX4065344: hESC derived retinal cells

◢ SRX4065345: hESC derived retinal cells

◢ SRX4065346: hESC derived retinal cells

◢ SRX4065347: hESC derived retinal cells

◢ SRX4065348: hESC derived retinal cells

◣ SRX11220467: HT-29

◢ SRX11220468: HT-29

◢ SRX768290: HT-29

◢ SRX11416753: KARPAS-422

◢ SRX11856133: LNCAP

◢ SRX11856134: LNCAP

◢ SRX11856137: LNCAP

◢ SRX11856138: LNCAP

◢ SRX11856139: LNCAP

◢ SRX11856140: LNCAP

◢ SRX11856141: LNCAP

◢ SRX11856142: LNCAP

◢ SRX359919: LoVo

◢ SRX13867212: MCF-7

◢ SRX13867213: MCF-7

◢ SRX13867216: MCF-7

◢ SRX13867217: MCF-7

◢ SRX10175282: PANC-1

◢ SRX10175283: PANC-1

◢ SRX1510444: VCaP

◢ SOX9: STRING

PAX8
BCL9L
PKDCC
TINAGL1
RORC
C2CD4D
NOXO1
SYNGR3
GFER
TBL3
CDYL
SH3KBP1
LRRC75B
GGT1
PBX2
GPSM3
DAB2IP
KLK6
PCDH1
NOTCH1
SLC35A5
ATG3
SOWAHA
KIF12
LZTS2
PPDPF
SDF4
B3GALT6
C1QTNF12
TMEM63A
LEFTY1
TECR
DNAJB1
LAMB3
SLC5A1
WWP2
SEMA3B
RBM7
C11orf71
CYP2W1
COX19
PNPO
PRR15L
ETNK1
MTF2
PLEKHB1
TP53BP2
KCNH8
TESC
SNAP29
PI4KA
FRMD5
PLEKHG4
UNKL
C16orf91
IL17RB
CHDH
TRNP1
TNS2
CFDP1
RELA
PDE8A
XRRA1
SPCS2
TMPRSS3
IRF2BP2
FRG2C
SLA2
CYP2R1
ADAP1
MTBP
MRPL13
SPTBN1
PSMD14
ACSS1
ARL4D
THOC1
HMX2
HMX3
TMEM143
SYNGR4
HECTD2
MAMDC2
XPA
ECPAS
SHF
VASP
SPTBN4
CABP7
ALDH3B1
DUX4
SEPTIN9
CNFN
ODC1
TNRC18
LOC100129484
ANXA2
RB1
PLPP2
RABGEF1
RASEF
EFR3A
TSKU
NWD1
RAB33B
PELI1
ZNF609
STXBP3
TMEM129
TACC3
SLBP
H3C6
H2BC8
H2AC8
LEPROT
LEPR
FOXA2
ITGA6
FBN3
ETV4
TTYH3
PELATON
ZNHIT1
PLOD3
FMN1
DENR
MACC1
STK32C
LRRC27
NPL
KIAA0895
ANLN
ABHD11
NRARP
NCMAP
FRMD7
ZFP36L2
PAQR4
KREMEN2
SCP2
ECHDC2
LSR
SPATA20
EPN3
OBP2B
CCDC200
FGFR2
FGFR4
IGSF10
PROM1
ARHGEF19
ATAD2
POLG
ARHGEF38
OGA
CCDC9B
ZNF862
SIPA1
MYO19
GGNBP2
PIGW
ARHGEF1
MUC3A
CLIP2
NQO1
DNAJA4
TLE3
EFNA4
BICD2
TTC30B
FRY
SDHAF1
SH3TC2
TES
RTKN
NFE2
ZNF572
ARHGEF10L
XKR8
USP3
ACAP2
STARD3
PPP1R1B
ZNRF3
NBEAL2
CCDC12
TMCC3
SOX8
LMF1
TRIM47
WDR74
STX5
CPSF4L
LY6L
CAPN12
SUPT20H
NPNT
LDHA
TRIM29
MAN1A2
SDHC
MPZ
PDP1
POR
BCL2L1
SHOC2
BBIP1
DIXDC1
RAB4B
MIA
RBM39
SMC4
IFT80
CUEDC1
SETX
CLDN3
MYH14
UBAP2
GNG8
PTK2
LYPD3
TP53INP2
TBC1D14
ETV6
FRG2
SLC26A8
MAPK14
PAQR6
BGLAP
ZFAND4
PLOD2
SMYD3
CAVIN1
MAMDC4
AJM1
RUNX1
RNF169
TMEM168
AAR2
CCN2
TACSTD2
RCC2
BTG1
SLC16A3
DTNB
COA1
ZNF473
VRK3
FOXO1
MET
DNAJC14
ZSCAN2
ADAMTS9
FZD6
ZBTB38
COBLL1
ITGA2
NF2
MVB12A
CFAP73
RASAL1
FURIN
COL23A1
LRATD2
UTP23
TYMP
SCO2
ODF3B
GATM
SPATA5L1
OTUB2
CALR
FARSA
RAD23A
TTC23L
NCOA5
ZNF385C
IQCH
AAGAB
TMEM209
SSMEM1
ABTB2
LIMCH1
C17orf58
SLC35E2B
RRBP1
FAM227B
DTWD1
PPP6R1
PPIC
LOC102724770
DGCR6
GLIPR1L1
CAPS2
FAM91A1
XAB2
STXBP2
PCP2
RTN4RL2
KRT19
KRT15
LIPG
CRY1
MICALL1
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
PLA2G2E
FNDC3A
DOCK9
LHPP
ABCD3
PRRT3
UGGT2
SMARCD2
MRPS10
TATDN1
NDUFB9
CDC42BPG
NDUFB2
PIGBOS1
PIGB
TRAPPC9
WDR93
PEX11A
BRSK2
NECTIN1
PFDN4
PARK7
LMO7
TUBGCP5
FBLIM1
SLC35B4
FOXC1
GBA
USP15
CCSAP
PAIP2B
MCIDAS
CCNO
CALM2
SBF2
DBP
CA11
FSIP1
BCL2L11
ZCCHC4
PIP4K2B
WDR61
TMEM39A
POGLUT1
APBB2
OGT
ALOX5
PTPRH
SPATA9
RHOBTB3
KANSL3
FER1L5
PBX3
LZTS3
SHKBP1
RNF135
SLC44A1
HSPA6
CACNA1S
ASCL5
ARHGEF17
MEMO1
CCDC93
KMT5B
E2F6
SRP14
SLC35E2A
BBS9
ERCC6L2
PTEN
KLLN
MRPS31
RTN3
ATL3
PPP1R9B
RGS3
IKBIP
APAF1
NME4
DECR2
CCNI
PSMD5
POP5
FKBP5
HILPDA
THBS1
ARNTL
CHSY1
KCTD12
SRCIN1
RPS29
LRR1
NOL7
ZNF264
FOSL1
CCDC85B
FST
SLC50A1
EFNA1
COMMD6
FAM228B
PFN4
AMMECR1L
EIF1AD
CST6
BANF1
MRPL30
MITD1
NUP85
FZD1
PTMA
BCL11B
IFT81
HGS
ARL16
VRK2
SLC4A8
NIPBL
GALNT6
PRDX1
ZNF207
C17orf75
GLCCI1
ZNF180
TBC1D30
MIA3
RPL26L1
BTBD10
PRKAR2A
PGBD2
TMEM65
UROS
BCCIP
RPS19
HSCB
CHEK2
DARS1
EEF1AKMT2
ABRAXAS2
RPS11
RPL13A
PRR25
GNG13
RALGAPB
SMIM11B
SMIM11A
GLI2
TESK2
MMACHC
OTULINL
KLF4
RHBDD3
EWSR1
RBM48
PEX1
ERCC5
HMGB1
MSANTD4
CDK12
SLC45A4
RABGAP1
ZBTB26
SCOC
CCNF
ARID2
RHBDL1
PPP1CB
FCHSD2
STUB1
JMJD8
SLC27A1
TTC30A
UFD1
CDC45
ARHGEF5
JAG1
CLDN4
CROT
CCND1
PRR7
LFNG
FAM200B
CD2BP2
TRMT2A
RANBP1
RRAS2
USPL1
CA12
FAF1
CDKN2C
FNDC3B
SF3A2
PLEKHJ1
ABRAXAS1
IFIT5
TAF15
CDC42EP3
POGLUT2
BIVM-ERCC5
BIVM
ELL2
USP47
COPG1
SSBP1
RBM34
TREM1
NMI
USP48
MINDY2
CDADC1
PPP5D1
CALM3
WASHC5
NSMCE2
NOTCH2
FGFBP3
UBALD2
EPOP
PRCP
DDIAS
GOLGA6L3
AQP5
AQP2
VSIG8
MYL12A
C21orf91
AHCYL2
DNAJC27
S100A2
PLA2G7
PTDSS1
MTERF3
INTS12
GSTCD
RUBCNL
PLS1
RCL1
C8orf76
RPL27A
ZNF584
TARS1
RNF225
SLC25A36
CEP152
DENND3
MRPL40
HIRA
USP1
PHF5A
ACO2
LDHB
PDE4DIP
DYNC2I1
ARHGEF7
UBR7
GON7
CCNL1
TTC32
TGDS
GPR180
AMACR
HNRNPA2B1
CBX3
MYH9
RBCK1
HNMT
LIN54
SKA3
MRPL57
TXNDC9
EIF5B
SLC39A10
COL9A2
MDH1
WDPCP
SLC2A13
SCYL3
TTC14
PHLPP1
VMP1
PTRH2
HYLS1
MTHFD2L
SFMBT1
FBXO47
RNF103-CHMP3
RMND5A
TBC1D31
PTPN13
PTPN4
FUT7
C9orf139
ABCA2
CCS
CCDC87
ITGB3BP
EFCAB7
NREP
DDR1
ARID1A
PGM2L1
WDFY2
TMEM71
PHF20L1
IQCC
DCDC2B
CCDC28B
IL1RN
PPM1D
BORCS6
ZBTB3
NUP107
SORT1
NOL11
POLR2G
ZNF143
SECISBP2
CKS2
TIPIN
TAF6L
PPL
TRIM62
IFRD1
PTPRU
ROPN1
TNNI3
DNAAF3
UBE2I
CFAP65
CBWD5
CBWD3
PCNX3
MAP3K11
SEPSECS
ZNF614
ZC3H8
INO80C
ZNF195
QTRT2
CCDC191
WDR27
C6orf120
RNF130
EHHADH
PRR19
PAFAH1B3
UCHL3
PYCR1
MAFG
FKBP9
SIRT7
SERTAD3
ROCK2
RIPK4
GDF5
CEP250
ATF4
PLEKHA8
FKBP14
STARD4
FAM131B
LCN2
NHLRC2
DCLRE1A
DNAJC3
PPIB
GNB2
EED
ZFAND3
UCHL5
RO60
RINT1
PUS7
KMT2B
PCNP
ASPH
BCAR3
GORASP2
FAHD2A
LSM8
PYROXD1
KLHL7
ZDHHC24
ACTN3
ACOT11
TMSB4X
SNX17
EIF2B4
ZNF513
GRAMD2B
IRX2
C5orf38
MATN1
YTHDF3
PRKCI
GGCT
DSCC1
NANP
MRPS30
PRDM8
ADGRG1
LY75-CD302
LY75
SPHK2
RPL18
FAM83E
MRPL3
ZNF76
MED4
IGFL4
LOC107984974
EMSY
GSK3B
ASXL1
FAM83D
DIAPH3
ZBTB40
DPY19L3
SYT7
CHD2
SELENOT
PDRG1
NFKB2
VANGL2
PAPSS2
STX18
KRT8
SERPINA1
STARD7
SPACA9
AK8
RANBP9
DPY19L4
H2BC15
H2AC15
CCDC130
H4C12
H4C11
CRYBG1
G2E3
MAL2
PGLS
GALNT3
MAT2A
KANSL2
ZHX1-C8orf76
ZHX1
RAD21
NDFIP2
TOE1
MUTYH
KCNK4
GPR137
BAD
MED30
TPD52
CD46
TMEM18
MOCS2
NUF2
ARL14EP
ZNF497
A1BG
RHEBL1
KMT2D
PTPDC1
UBE2F
SECISBP2L
NFATC2
PIK3R3
HEXIM2
SETDB2-PHF11
SETDB2
CAB39L
PPP4R3B
ZBTB11
SLC23A1
RPL24
ZBTB6
RC3H2
COQ9
CIAPIN1
PROB1
MZB1
ACTR6
CCNJL
RUVBL1
WDR11
THADA
PMS1
ORMDL1
CARNMT1
TMEM9B
RASGRF2
PRKD3
CTNNB1
CPEB3
ZNF777
LIG4
ABHD13
MARCHF5
ZC3HAV1L
TTC39A
TBC1D17
PNKP
AKT1S1
PPP1R13L
POLR1G
RBM28
EXOSC10
TTC26
TRMT61B
TEAD1
COL9A3
SAP18
TENT5A
ITGB1
ELMOD2
CEP126
ANGPTL5
DMBX1
ZNF780A
ITGB6
GIT2
ANKRD13A
PRKDC
MCM4
ARHGAP27
MGAT4B
SQSTM1
GADD45A
PDF
NIP7
COG8
CBLB
ARHGEF35
PTBP3
RPN2
MROH8
GALK2
TP53I3
SF3B6
MRPL45
COPS2
RNF19A
VPS50
HEPACAM2
ACOT2
OTULIN
ZCCHC9
SNRPG
FAM136A
TCF12
B3GALNT2
GTF3C2
LSG1
COMMD2
SCAF11
ZNF576
IRGQ
YPEL5
FRG1
ZNF518A
REEP6
PCSK4
WRNIP1
MYLK4
NOP56
MRPS24
CALU
RNF139
CCNC
EDEM3
UBE2T
PPP1R12B
MRPS35
TUBG1
RETREG3
PPP1R8
PLXDC2
FOXD4
ZNF280D
SNRPB2
FAM98A
CLCF1
RPS27A
CLHC1
MTREX
DHX29
SMARCA5
GTF2H2
CDC42EP1
NAGK
TRNAU1AP
POLE3
C9orf43
ALAD
RPS27L
TIMMDC1
C6orf89
DISP1
WDR53
FBXO45
THAP5
DNAJB9
NUFIP2
GSDMD
CPEB2
C1orf115
EIF3A
TNFRSF11B
COLEC10
INTS6L
CDON
EIF2AK3
ZC3H6
ERCC1
KDM3A
C19orf48
HSPE1-MOB4
HSPE1
HSPD1
C9orf85
ABHD17B
TSPAN12
ZNF711
SATL1
SHROOM1
PTCD2
MRPS27
GPR37
DCBLD1
RRM1
CORO2A
RAI1
ARL2BP
BET1
PTOV1
VIRMA
RMDN2
HES6
ERBB2
ZNF226
UBC
GTF3C3
C2orf66
NBN
MRPL42
HAGH
FAHD1
MAP3K13
ITGB5
LRRC58
TRMO
UBR2
FBF1
ICE2
STXBP4
COX11
SHC3
GPSM2
ITGB8
OTUD7B
METTL9
POC5
TMED2
ZNF451
KIF16B
TRAPPC2
OFD1
HELZ
CFAP20
WDR36
GLCE
MVK
TUT1
MTA2
MEF2A
ZNF770
WDR33
COG7
BICDL2
MMP25
EPHX1
RTL10
GNB1L
ARSJ
CEP63
ANAPC13
ESRP1
RPS3A
EIF4A2
ZFC3H1