ChIP-Atlas: Target genes

Potential target genes for SOX9

Query protein: SOX9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10175282 | PANC-1
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX9's Target genes

◢ SOX9: Average

◢ SRX718108: hESC derived pancreatic cells

◢ SRX4065343: hESC derived retinal cells

◢ SRX4065344: hESC derived retinal cells

◢ SRX4065345: hESC derived retinal cells

◢ SRX4065346: hESC derived retinal cells

◢ SRX4065347: hESC derived retinal cells

◢ SRX4065348: hESC derived retinal cells

◢ SRX11220467: HT-29

◢ SRX11220468: HT-29

◢ SRX768290: HT-29

◢ SRX11416753: KARPAS-422

◢ SRX11856133: LNCAP

◢ SRX11856134: LNCAP

◢ SRX11856137: LNCAP

◢ SRX11856138: LNCAP

◢ SRX11856139: LNCAP

◢ SRX11856140: LNCAP

◢ SRX11856141: LNCAP

◢ SRX11856142: LNCAP

◢ SRX359919: LoVo

◢ SRX13867212: MCF-7

◢ SRX13867213: MCF-7

◢ SRX13867216: MCF-7

◢ SRX13867217: MCF-7

◣ SRX10175282: PANC-1

◢ SRX10175283: PANC-1

◢ SRX1510444: VCaP

◢ SOX9: STRING

KIF5C
MAMDC2
RGPD1
RGPD2
MTRNR2L2
MSH3
DHFR
MTRNR2L8
MUC3A
ZNF229
SNX16
MTRNR2L1
LOC102724770
DGCR6
EPN1
MTRNR2L9
ZNF285
PTPRN2
NEUROG3
EGR2
LGR6
DUX4
RGS19
OPRL1
LKAAEAR1
ART1
FFAR4
SPAAR
HRCT1
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
CTDP1
ADGRA1
C1orf198
FRG2
CYP24A1
FAM78B
TRIM48
CYP4F11
FRG2C
MRPL23
PAX4
PHRF1
DAB1
AURKAIP1
SHISAL2B
PTF1A
MEIS1
ARRDC4
TRRAP
TMEM130
MYH11
MMP8
CCDC200
VPS16
PCED1A
NEUROD2
UCKL1
COL23A1
HELT
RNF13
TMEM242
DRD4
CRYAA2
CRYAA
RBM20
OPRD1
HLTF
OR2T1
PIK3CD
DLL3
UBE2C
TMEM233
PMF1-BGLAP
PMF1
CRHBP
WDR74
STX5
ZBTB32
SLC6A19
LINGO1
OSGIN1
NGB
PRSS56
CHRND
FAM43B
TTC9B
CCNP
SLC1A2
DIPK1C
WDR97
MAF1
CYC1
FLT4
BAIAP2
IGF2
CXCL12
SFRP4
EPDR1
SUSD5
VBP1
EMILIN2
DYSF
FAM72B
BTNL9
USP17L20
USP17L22
USP17L11
USP17L18
USP17L17
USP17L19
ARHGEF12
TLCD5
TRIM2
HR
YJU2
GALR1
HMGCS1
TACR1
STIP1
IQGAP2
NUDT2
KIF24
MSANTD4
RTN4RL1
DPH1
CYBRD1
SLC25A48
CXCL14
LRRN4
DUSP9
TCHH
SFRP5
FOLR1
NKAIN1
CNIH3
MACROH2A2
AMZ2
SPNS2
CLDN9
DOLPP1
SLC25A41
KHSRP
SLC25A42
SHISA2
EDN3
SCTR
KRT17
PITPNM1
RORB
ATP5MC1
RELN
BICC1
FAM72C
FAM72D
GNAS
PMP22
BSND
ATOH8
APCDD1L
SART1
CDX2
PDGFD
NPPC
CCDC177
ROBO3
PRDM6
CEP164
BMP2
HNRNPL
BTBD11
ARHGAP19
TRIP4
PCLAF
FBN1
SBNO2
MXRA5
ANKHD1-EIF4EBP3
ANKHD1
SCGB1C2
SCGB1C1
ODF3
FCMR
KSR2
VPS37B
ST6GAL1
CBX5
HNRNPA1
SOD2
ACAT2
MAPT
EFCC1
CFAP92
PCBP2
PRR13
SHISA3
PLD3
C19orf47
GJD3
PLAAT5
SP1
EYA2
ARSI
VAMP2
PER1
MRPL20
CCNL2
CENPA
PANK2
G3BP1
ONECUT1
TOP2A
SLC35E2B
PAX8
BCL9L
SLC35E2A
TINAGL1
PKDCC
POR
ARL4D
RORC
C2CD4D
PPDPF
PBX2
GPSM3
NOXO1
ATG101
CDYL
SMARCD2
PDXDC1
SNAP29
PI4KA
PFDN4
SYNGR3
GFER
POLG
PLEKHB1
IQCH
AAGAB
TBL3
MTF2
PRKCI
LZTS2
TAF15
PARK7
DAB2IP
MYH14
SH3KBP1
PPIB
RNASEH2A
PRDX2
MYO5C
KIF12
LRRC75B
GGT1
SOWAHA
FAM53C
CDC25C
EIF3B
OGA
CNOT6
KLK6
SDF4
B3GALT6
PTDSS1
MTERF3
LSR
DLST
AKIRIN1
GIT2
ANKRD13A
PCDH1
NOP56
PGBD4
EMC7
YY1AP1
DAP3
FAM227B
DTWD1
CENPP
STX16
C1QTNF12
SEMA3B
LRATD2
MYL12A
GNB2
SMIM41
EED
ARHGEF1
FRAT2
ATG16L2
PIK3R3
RHBDD3
MYO9B
HAUS8
EWSR1
TRNP1
SLC35A5
ATG3
ZNF775
CMC2
CENPN
USP15
PLEKHG4
CYP2W1
COX19
TECR
DNAJB1
FOS
SOX8
LMF1
TMEM129
TACC3
PRR19
PAFAH1B3
FAM102A
RAB4B
MIA
NDST2
UNKL
MRPS24
UIMC1
C16orf91
FRAT1
PRKDC
MCM4
PDE8A
LY6L
MYL12B
CDCA7L
SETD5
TNNI3
DNAAF3
FGFR2
PMVK
PPP2R2C
CNFN
PTOV1
SLBP
DNMT1
ETNK1
UROS
BCCIP
NOTCH1
ZNF217
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
IQCE
SPTBN1
TIGD5
EEF1D
KMT5B
SELENOW
COMMD6
ETV2
COX6B1
MAT2A
BCL6
FAM72A
CFDP1
PAQR4
KREMEN2
WWOX
PGP
HBP1
DGAT2
TAF6
MBLAC1
FUS
CNPY4
TMEM63A
LEFTY1
ZNHIT1
PLOD3
PPP6R1
PDE4DIP
AMOTL2
KCNH8
LAMB3
ABHD11
PAXIP1
UCHL3
RPS29
WWP2
ATP6V0C
AMDHD2
FLCN
ZNF219
TMEM253
PPP5D1
CALM3
WASL
EAPP
EIF2D
CIC
TSKU
XRRA1
WDR38
SPCS2
RPL35
ARPC5L
NCOA3
RTKN
ACSS1
HMGB1
TNRC18
LOC100129484
DGLUCY
USPL1
E2F6
KANSL3
FER1L5
BRICD5
MTBP
MRPL13
H3C6
H2BC8
H2AC8
TSPAN4
POLR2L
CD151
SAP30BP
RECQL5
ABTB2
RMND5B
SPATC1L
TESC
ARNTL
METTL25
CCDC59
PNPO
RNF103-CHMP3
RMND5A
ZNF609
NOCT
BZW2
ANKMY2
LIN54
PRDM10
NOL8
IL17RB
CHDH
NWD1
ZCCHC4
STK35
ITGA6
CDIPT
ZBTB3
CDON
USP3
FOSL1
TMEM160
MAPK6
PLP2
MAGIX
MRPS31
PDE6A
DBP
CA11
TRAPPC6B
PNN
OXR1
FAM227A
CBY1
SHKBP1
FANCI
SLA2
NUCB2
UBE2B
GATAD2B
CDKL3
TMEM260
C6orf226
PROSER3
LIN37
HSPB6
IRF2BP2
HMX2
ZFAND3
DPY19L4
DPP9
PIP4K2B
E4F1
SSBP1
FGFR4
KAT7
MRPS11
MRPL46
RASSF7
LMNTD2
DRAP1
C11orf68
PSMD14
C21orf91
RBM7
C11orf71
ZNF335
KRT19
KRT15
TRAPPC9
PSIP1
CASKIN1
CABP7
LUC7L2
FBN3
DNAJA4
SRI
RBM39
ADAMTS9
LAD1
ANKRD39
PRRC2B
HMX3
TNS2
TP53BP2
LYSMD2
ZNF8
FAM83D
FRMD5
NDUFB1
CPSF2
TTLL7
CNP
HDAC2
TEDC1
HBD
HBB
SYVN1
LEPROT
LEPR
ARAF
UFSP2
C4orf47
CYP2R1
SMIM35
THOC1
TMOD2
DISP3
NCDN
KIAA0319L
WASHC5
NSMCE2
STK32C
LRRC27
SLC5A1
STX18
KANK1
SRPK2
ANKRD12
TCP11L2
LRR1
RPL22
RNF207
MIA2
KPNA2
ANP32B
RRBP1
TES
RELA
PRCP
DDIAS
SULT1A4
SULT1A3
SLX1B
SLX1A
BOLA2B
BOLA2
PRDX1
ZNF3
COPS6
TARDBP
HHIPL1
CCDC85C
ATAD2
RNASEK
RABGEF1
C17orf49
H3C15
H3C14
FYN
MICAL2
ARHGEF19
H4C14
PRR3
GNL1
TBC1D14
CLDN12
RAB33B
UBA1
TMPRSS3
MRPL21
IGHMBP2
TEPSIN
NDUFAF8
SS18
LANCL2
STXBP3
DNAJC14
SLC38A2
ALDH3B1
PLA2G7
C6orf62
SHROOM1
GLIPR1L1
CAPS2
TBC1D17
PNKP
AKT1S1
TSPAN8
ITGB8
PELI1
ZNF180
UBE2A
CXorf56
CNOT3
GTF2IRD2
ANP32A
RUVBL1
ZFAND4
HSP90AB1
H2AC19
H2AC18
UQCRC2
OTUD7B
RPN2
MROH8
C2orf42
PLPP2
FMN1
PPP1R13L
POLR1G
FAM228B
NUP107
UQCRQ
LEAP2
GDF9
GBA
MBNL1
ATP8A1
SELENOH
PTPRH
PIF1
CCDC85B
INTS12
GSTCD
HECTD2
ZNRF3
ADAP1
WRAP53
TP53
MGRN1
ZNF572
PSMD6
CCDC9B
BOLA2-SMG1P6
TSC22D1
H2BC15
H2AC15
TMEM167B
TANGO2
ARVCF
SP2
ACAP2
ATP5PD
ZMYM5
PRR15L
FMC1-LUC7L2
FMC1
OGDH
FBXO5
ETV4
SSNA1
OTUB2
ATF7-NPFF
ATF7
ANAPC2
TMBIM4
PCYT1A
NUF2
UGT2B7
MYT1
OSBPL2
SLC33A1
CNOT1
POLR2J3
RUBCNL
PLCE1
NBEAL2
CCDC12
TMEM143
SYNGR4
TMEM45A
RASEF
ITGB3BP
EFCAB7
PTPRA
ARHGEF38
EFNA4
TBRG4
OTOGL
BAZ1B
PTP4A2
MYBL2
TRPV4
EIF1AD
CST6
BANF1
TMEM168
PSPN
ALKBH7
PRR7
MED23
DUSP6
HYAL1
VTCN1
RPS3
NFE2
HPS5
GTF2H1
CENPE
RPL19
CACNB1
MRPS23
SEPTIN9
GALK2
BCAS3
MRPL40
HIRA
HDAC1
TRIM37
RRM2
GTF2IRD2B
TLE3
TMEM94
OPA1
USP17L21
USP17L12
PPM1D
LSG1
CALU
UBALD1
CALR
BCL2L1
NFYC
ADPGK
SPRYD3
INAVA
SMC4
SLC35B2
NFKBIE
IFT80
MADD
HNRNPUL1
FZR1
FRMD6
DOHH
KCNK4
GPR137
BAD
SORT1
ZMYM2
SLC24A1
GTF2H2
RNF43
RDH12
RDH11
UTP18
MBTD1
TP53I3
SF3B6
UXS1
FAM20B
CLTC
TSKS
AP2A1
SKA2
PRR11
H2AZ2
PELATON
ABHD2
EMSY
DCLRE1B
AP4B1
SRCIN1
OLFML2A
NR6A1
SERTAD1
RNF6
SLC44A1
RBBP5
SLC11A2
H4C15
SMC3
PCYOX1L
MRPL44
HACD3
FDFT1
PEX3
DSTYK
ADAT2
TMEM262
SASH1
MTCH1
GOLGA6L4
KMT2E
CBWD5
EIF2AK3
BMP5
ZNF484
WDR11
MCM7
DYNC2I1
AP4M1
MYO19
GGNBP2
PRR14
FBRS
TM4SF1
TMEM258
PDK2
FEN1
MAST4
KMT5C
TUBD1
RPS6KB1
RBM42
TUBB4B
KIAA0895
FAM166A
SLC25A10
MRPL12
LRCH4
FBXO24
FAM86B1
CEP63
ANAPC13
MTSS2
GIPC1
ACVR1B
SSR3
SIRT2
NFKBIB
ZKSCAN1
MACC1
COMMD2
PRKACA
PDE8B
MRPL45
CNNM2
CBWD3
CANX
FZD1
UFD1
CDC45
BACE1
UBC
SCP2
TAF13
PRKAB2
CHD1L
ZNF519
ATG9B
ABCB8
MRPS10
C20orf204
RPS7
COA1
TFPT
PRPF31
UTP23
SFXN5
ATP5F1E
GET3
FBXO32
SF3A3
TMED9
GPR84
B4GALT7
SREK1IP1
SHF
MYADM
LYRM1
DCUN1D3
CWC27
SPATA20
CD164
SORBS3
MIA3
LEMD2
H4C9
H2BC12
H2AC12
FARSA
ARHGAP39
YWHAQ
RAB28
SNX17
EIF2B4
FMO5
PDIA4
ZNF687
PXMP2
POLE
NME1
VMP1
TMCC3
PTRH2
VGLL4
LMCD1
SYT8
RAD23A
RAC3
PTMA
FBXO33
CNPY3
NREP
PTCD3
POLR1A
EEFSEC
CUEDC1
TESK2
MMACHC
TREH
ZNF574
TADA3
DIAPH1
ARPC4-TTLL3
ARPC4
NDUFS7
ZNF300
TRAF2
IFT46
ARCN1
NOL11
GOLGA6L3
HMGCR
MAP11
PRORP
PPP2R3C
TOM1
AQP5
NHLH1
DICER1
ARID2
VIRMA
TMEM229B
CSPP1
COPS5
SRSF7
MPP7
MGLL
COPS7B
LRRC37A3
ZNF24
ZNF862
RPL26L1
RWDD1
ISOC2
DERL1
RBM28
PARD6B
COQ8A
SUPT4H1
RPS11
RPL13A
ODC1
LMOD3
PSMG2
IVD
CDK12
ARHGAP27
UGP2
STEAP2
TBC1D30
HLF
NFIB
MTMR14
INTS5
ECHDC2
SCAND1
NLK
B3GALT2
GTF2H2C_2
GTF2H2C
THUMPD1
ETV6
DENR
HEXIM2
PKNOX1
TRIM29
COL9A2
RBM48
PEX1