ChIP-Atlas: Target genes

Potential target genes for SOX9

Query protein: SOX9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX768290 | HT-29
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
SOX9's Target genes

◢ SOX9: Average

◢ SRX718108: hESC derived pancreatic cells

◢ SRX4065343: hESC derived retinal cells

◢ SRX4065344: hESC derived retinal cells

◢ SRX4065345: hESC derived retinal cells

◢ SRX4065346: hESC derived retinal cells

◢ SRX4065347: hESC derived retinal cells

◢ SRX4065348: hESC derived retinal cells

◢ SRX11220467: HT-29

◢ SRX11220468: HT-29

◣ SRX768290: HT-29

◢ SRX11416753: KARPAS-422

◢ SRX11856133: LNCAP

◢ SRX11856134: LNCAP

◢ SRX11856137: LNCAP

◢ SRX11856138: LNCAP

◢ SRX11856139: LNCAP

◢ SRX11856140: LNCAP

◢ SRX11856141: LNCAP

◢ SRX11856142: LNCAP

◢ SRX359919: LoVo

◢ SRX13867212: MCF-7

◢ SRX13867213: MCF-7

◢ SRX13867216: MCF-7

◢ SRX13867217: MCF-7

◢ SRX10175282: PANC-1

◢ SRX10175283: PANC-1

◢ SRX1510444: VCaP

◢ SOX9: STRING

POR
IQCH
AAGAB
PARK7
POLG
SNAP29
PI4KA
PPIB
TAF15
SLC35E2B
CNOT6
MRPS24
AKIRIN1
ARRDC4
PFDN4
TMEM160
NOP56
DOLPP1
UBE2C
ZBTB32
RNASEH2A
PRDX2
PRR19
PAFAH1B3
PROSER3
LIN37
HSPB6
PTOV1
MYO9B
HAUS8
DLST
SLC35E2A
WASL
OGA
PLP2
MAGIX
PHRF1
HHIPL1
CCDC85C
UBA1
PITPNM1
CDON
GNB2
ATP6V0C
AMDHD2
STIP1
CIC
ZNF775
WDR38
RPL35
ARPC5L
ATG101
SMIM41
ZNF8
PRKDC
MCM4
ETV2
COX6B1
RASSF7
LMNTD2
PDXDC1
SLC25A41
KHSRP
EED
TAF6
MBLAC1
CNPY4
ZNF335
DBP
CA11
SELENOW
CLDN9
DNMT1
COMMD6
UCHL3
PRKCI
RAB4B
MIA
BZW2
ANKMY2
HNRNPL
TMEM45A
RNF13
WDR97
MAF1
CYC1
RHBDD3
EWSR1
CDCA7L
PAXIP1
PRR3
GNL1
WDR74
STX5
TRAPPC6B
PNN
TANGO2
ARVCF
RMND5B
CNOT3
TEPSIN
NDUFAF8
USP15
GIT2
ANKRD13A
UIMC1
LIN54
PIK3R3
ZMYM2
MRPL20
CCNL2
NDST2
TBC1D17
PNKP
AKT1S1
SHKBP1
TARDBP
TOP2A
KAT7
DPP9
ANP32A
PTP4A2
TNNI3
DNAAF3
CNOT1
PPP5D1
CALM3
ARAF
EIF3B
CENPE
ANKRD12
PGP
BRICD5
ARNTL
E4F1
PPP1R13L
POLR1G
DISP3
SPATC1L
FRAT2
TTC9B
CCNP
SP2
TSKS
AP2A1
MRPS11
MRPL46
PSPN
ALKBH7
LEMD2
TIGD5
EEF1D
UROS
BCCIP
FANCI
HDAC1
UBE2A
CXorf56
CMC2
CENPN
PTDSS1
MTERF3
NCDN
KIAA0319L
FUS
C6orf226
PPDPF
FRAT1
CASKIN1
FAM53C
CDC25C
PRDM10
MYL12A
NUCB2
SERTAD1
HMGCS1
SYVN1
ZNF519
PRKAG2
PIP4K2B
GPR84
FAM83D
FOS
TCP11L2
SKA2
PRR11
ANKRD39
ATP5PD
MYT1
RPL19
CACNB1
ATG16L2
RBM42
UFSP2
C4orf47
IQCE
RNF103-CHMP3
RMND5A
TRAF2
OSBPL2
ATP8A1
YY1AP1
DAP3
SSNA1
ANAPC2
MADD
PSIP1
SOD2
OLFML2A
NR6A1
ISOC2
KATNB1
LUC7L2
FMC1-LUC7L2
FMC1
UFD1
CDC45
INAVA
HNRNPUL1
UQCRC2
GIPC1
CSPP1
COPS5
HDGFL2
LRCH4
FBXO24
CDK16
NLK
TRIP4
PCLAF
DGAT2
SLC25A42
GTF2IRD2
GTF2IRD2B
LRPPRC
STX16
BCL6
KMT5C
PANK2
EFNB2
ZMYM5
SRI
MOCS3
DPM1
PMVK
FZR1
DOHH
CSNK2A1
BAZ2A
ATP5F1B
TSPAN4
POLR2L
CD151
PDK2
FOSL1
CCDC85B
UBE2B
CDKL3
UQCRQ
LEAP2
GDF9
C2orf42
CKAP5
KIF1B
MSANTD4
HOMEZ
CBX5
HNRNPA1
ALDH4A1
PKDCC
TMTC4
VBP1
RPN2
MROH8
TTBK2
RRBP1
TUBB4B
FAM166A
STPG3
SLC34A3
MTCH1
OPA3
PRCP
DDIAS
PIF1
DOT1L
HDAC2
RPL22
RNF207
WDR45
RNASEK
C17orf49
WASHC5
NSMCE2
AK2
SULT1A4
SULT1A3
SLX1B
SLX1A
BOLA2B
BOLA2
BOLA2-SMG1P6
DIAPH1
PRMT1
RAB7A
RLN2
PLEKHG5
KLF6
COQ8A
TMEM218
CDK5RAP2
FAM72C
FAM72A
ATP5MC1
IFT52
FANCF
FAM72B
CD164
ZNF574
MYL12B
LIPE
PMF1-BGLAP
PMF1
TRPM4
HRC
RBM27
GOLGA6L9
CDIPT
ZSWIM1
SPATA25
CTSA
PTCD3
POLR1A
PRR14
FBRS
USP31
FBXO5
CHCHD6
LSR
KCTD7
SELENOH
CENPP
NOL8
GATAD2B
GNG3
BSCL2
OSBP
PKNOX1
GOLGA6L10
SMC3
PRKACA
CENPA
HNRNPC
SUN3
C7orf57
GOLGA6L4
WDR62
THAP8
PLXNA3
ZBED6CL
LRRC61
ACTR3C
TTLL7
ZFAND3
PRRC2B
CANX
SIRT2
NFKBIB
SS18
RUVBL2
GYS1
SETD5
C6orf62
MYH14
MTMR12
ANKRD17
FLCN
ZNF219
TMEM253
C21orf91
SLC46A3
TPBG
ZSWIM4
FAAP24
CEP89
CNFN
CWC25
DGCR8
OXR1
SPATA17
GPATCH2
METTL25
CCDC59
ZNF564
ANKZF1
RLN1
MAOA
UQCRH
LRRC41
NOCT
ABTB2
UNG
ALKBH2
EAPP
ZNF687
KIF5C
CCDC102A
ADGRG5
SIGMAR1
GALT
ARID3C
UCKL1
OGDH
NDUFB1
CPSF2
MGRN1
UBALD1
H2AZ2
ACTN1
FAM72D
IVD
SRPK2
RITA1
DDX54
MIA2
DCUN1D4
ACAP2
PXMP4
SPRYD3
LENG1
DRAP1
C11orf68
JPT2
PTCD2
MRPS27
MRPL21
IGHMBP2
RAVER1
ICAM3
SLX4IP
MKKS
RFX1
YJU2
ATG9B
ABCB8
PLAG1
CHCHD7
ZNF484
PRKCZ
UTP18
MBTD1
YIF1A
TMEM151A
CCT5
ATPSCKMT
MAP1LC3B
FBXO31
MTRNR2L2
MSH3
DHFR
TADA3
ARPC4-TTLL3
ARPC4
NOXO1
TBL3
RPS2
RNF151
SPSB3
NUBP2
MRPS34
EME2
MIA3
METTL3
EIF3F
PPFIA3
LIN7B
C19orf73
SUPT4H1
AFF1
MRPS31
STRIP1
TYK2
PSPH
CCT6A
MTMR14
ENPP5
SMARCAL1
MPHOSPH8
PPWD1
CENPK
FASN
PAX8
DAB2IP
ZFAND4
NFYC
FAM110A
DNM2
CEP164
ZNF48
TBC1D10B
MYLPF
POLR2J3
CLP1
ZDHHC5
SAP30L
P4HB
ARHGDIA
KLK6
TMEM129
TACC3
SLBP
CNPY3
SREK1IP1
CWC27
ATP5IF1
SASH1
ZNF77
TSR3
GNPTG
SRXN1
SPAG7
MZT1
BORA
ZNF92
BCL9L
TINAGL1
TDRD7
PTPRH
STK35
MAT2A
VAMP2
PER1
NECTIN3
SIPA1L2
FAM20B
ARHGAP19
TMEM94
PAIP2B
GATAD2A
F11R
PAK4
RECQL
GOLT1B
VDR
TOMM40
CD68
EIF4A1
ANKHD1-EIF4EBP3
ANKHD1
GOLGA6L3
KCNAB2
MBD1
CXXC1
RAB1B
KLC2
TRAPPC9
BAZ1B
SHC1
FLAD1
CKS1B
HSP90B1
FCHSD2
SP1
SRM
FRMD6
LAMP1
DAZAP2
ZSWIM3
ACOT8
BCAS3
TFPT
PRPF31
DYNLL1
RRM2
GOT1
KLF5
RAB28
TOM1
PMEPA1
HNRNPAB
G3BP1
NAGPA
TPRN
TMEM203
NDOR1
RNF6
PRKCSH
CCDC151
RBBP6
RAB40B
RAB40C
PABPN1
PPP6R3
CDT1
APRT
ING1
CARS2
LANCL2
MED23
HIBADH
MYBL2
FBXO33
MAMSTR
LZTS2
TMEM262
ASH1L
TCERG1
TMEM260
ZBTB3
POLR2G
SF3A3
FAM227A
CBY1
KANSL1
LAPTM4A
HBP1
GTF2H2C_2
GTF2H2C
PI4K2A
MORN4
SLC25A38
TOP1MT
RHPN1
FSIP1
ACAT2
GOLPH3L
ZNF175
KAT6B
AKT2
PACSIN2
THRA
TOM1L2
DRC3
BCL2L1
PRR5L
CUL2
COMMD9
SMARCD2
ENSA
ZNF138
FAM156A
LY6L
CLK3
PPP2R5A
PSMA7
PRR25
GNG13
MTRNR2L8
MCM10
RALY
TNRC6B
GRIPAP1
USP3
UGP2
RCN2
DYRK1B
TMEM242
NARF
CYBC1
ZNF273
PPP3CA
TMEM199
SEBOX
POLDIP2
PCYOX1L
EIF2AK3
BZW1
GTF2H2
TK1
AFMID
PRR12
CDCA3
ZFAND2A
AGPAT1
RNF5
AGER
SDF4
B3GALT6
RBBP8NL
KMT2E
IER5L
EIF2D
SPTLC2
SLC45A4
IMMP1L
ELP4
DOK4
VPS26B
NCAPD3
PER2
LSG1
ERV3-1-ZNF117
ERV3-1
MEIS1
WRAP53
TP53
RFWD3
CALU
MAMDC4
AJM1
SYNE4
LOC101927572
ALKBH6
ZFYVE21
XRCC3
ISG20
NOC4L
DDX51
RHCE
MACO1
HYAL1
TUSC2
HYAL2
SFXN5
RPS11
RPL13A
LRRC56
HRAS
TTF1
CFAP77
PPM1L
PTMA
TTC16
PTRH1
TRAPPC3
MAP7D1
CFAP157
FRYL
H4C9
H2BC12
H2AC12
TRIP10
GPR108
TMEM183A
BUB1B
WASF2
JUNB
FBH1
ANKRD16
IGSF9B
CCDC61
TACC1
ABHD2
ERI3
MSH2
CALR
FARSA
RAD23A
NFIB
GGCT
HERC2
H3C15
H3C14
H2AC19
H2AC18
CHD9
KDM4B
TPST1
PPP2R1A
CTPS1
SLC25A25
NAIF1
GDI1
ATP6AP1
RWDD1
TIMM50
H4C14
RUVBL1
H4C15
ACTL6A
SEPTIN11
MAPKAPK5
COPS7B
PDE6D
TBCB
POLR2I
OVOL3
ATF7-NPFF
ATF7
MYEOV
LYRM1
DCUN1D3
ODC1
SPNS1
LAT
NEURL2
RAB11B
CCDC174
LMTK2
MAMDC2
CBX8
TRIB1
FAM126A
RGMB
TMEM256
PLSCR3
NLGN2
RMI1
HNRNPK
PEX3
ADAT2
TSPAN31
CDK4
AGAP2
HNRNPR
C1orf174
GET3
ASPM
RBM39
DNAJC30
BUD23
HMGB1
USPL1
CCNB2
TDRKH
PGC
MAPK9
MTF2
CDC42BPG
UBN1
GLYR1
RAC3
LRRC45
CENPX
NPAS4
FDFT1
ATP5F1E
TM9SF4
C16orf72
CCDC116
STAP2
MPND
SDF2L1
H4-16
H2AJ
KPNB1
GLRX5
CYTH2
COMMD2
CHD6
SCAND1
INTS1
MRPS15
RAB3A
SYNGR3
GFER
ZNF609
HACD2
ZNF212
ENPP4
CLIC5
AP3M2
LY6G6F-LY6G6D
LY6G6F
ABHD16A
SSBP1
MRM3
GLOD4
SSR3
SPAG8
HINT2
STT3A
DROSHA
C5orf22
TMEM219
PGD
NOP53
MGAM2
TESC
SORT1
BBX
GLO1
PLA2G7
BMP5
IL23A
PGAP2
PAN2
NDUFS3
KBTBD4
FAM180B
TMX2
MED19
DIAPH3
GTF2H3
EIF2B1
ZNF639
MRPL34
DDA1
ABHD8
WASHC2C
ADPGK
ATAD3B
RAB5B
PMEL
CDK2
PCOTH
MIPEP
C1QTNF9B
ARHGEF1
PPP6R1
CRBN
PDIA6
GATA2
CEP131
TMED9
B4GALT7
C7orf50
DNAJB5
RPS20
CENPF
ZNF695
WDR70
NUP155
PRRG2
NOSIP
EVI5L
TRIAP1
COX6A1
WASHC2A
CREBRF
ZNF830
CCT6B
ZNHIT1
PLOD3
ZCCHC4
TMEM222
FAM204A
HSPA5
RECQL4
MFSD3
LRRC14
CHMP3
LRRC24
GTF3C3
C2orf66
TOR1A
STX18
RBBP5
PLEKHM3
ZSCAN22
PCNX3
MAP3K11
ADD1
WHAMM
FSD2
HEXA
MTERF4
KIAA1841
SIN3A
HYOU1
COA1
SLC39A13
CCDC77
COPZ1
MVP
STK11
RPTOR
MYH10
IMP4
CCDC115
AKR1E2
ANAPC5
SYP
ZNF680
TIMM17B
PRICKLE3
PQBP1
POMZP3
MVD
RNF166
CTU2
SRPK1
TRAFD1
TSPAN8
ZBTB46
NWD1
SLC39A4
CPSF1
CREB3L2
ERCC1
VPS50
HEPACAM2
POLR1B
C8orf33
NUF2
ALG10B
TATDN3
NSL1
INPP5B
FAM228B
TP53I3
SF3B6
LRRC37A3
FAF1
CDKN2C
TPCN1
IQCD
ERCC2
COTL1
PSMD4