ChIP-Atlas: Target genes

Potential target genes for CPSF3

Query protein: CPSF3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10448664 | HeLa
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CPSF3's Target genes

◢ CPSF3: Average

◢ SRX8018228: 293

◢ SRX8018229: 293

◢ SRX8018230: 293

◢ SRX8018231: 293

◣ SRX10448664: HeLa

◢ SRX10448665: HeLa

◢ SRX10448666: HeLa

◢ SRX10448667: HeLa

◢ SRX5441330: HeLa

◢ SRX5441331: HeLa

◢ SRX5441334: HeLa

◢ SRX5441335: HeLa

◢ SRX9237243: K-562

◢ SRX9237244: K-562

◢ SRX9237245: K-562

◢ SRX9237246: K-562

◢ SRX8945051: U2OS

◢ SRX8945057: U2OS

◢ CPSF3: STRING

MTRNR2L2
MSH3
DHFR
MTRNR2L1
FRG2C
ZC3H10
RPL41
PGK1
IER3
FLOT1
H2BC11
H2AC11
H4C9
DUX4
JUNB
MTRNR2L8
H2BC4
H2AC6
PHF1
HES7
ALOXE3
MAZ
PHF23
DVL2
UBE2M
CHMP2A
MSH4
SYCE2
IFITM1
IFITM3
DHPS
SLC38A2
FRG2
H2BC5
H1-4
GTPBP6
ID3
H3C15
H3C14
H2AC19
H2AC18
NDUFAF3
DALRD3
B3GALT4
H4-16
H2AJ
MPDU1
LOC100996842
CD68
NAT10
C6orf226
STX10
IER2
H4C12
IER5L
CNOT3
ATAT1
GADD45B
SIX5
RPL17-C18orf32
RPL17
C18orf32
ADM
FTH1
DDIT4
H4C3
H1-6
H4C2
H4C1
H2BC12
H2AC12
ZBTB45
H4C11
TMSB4X
GAPDH
RAD23A
RCC1
SYNRG
PSMG1
RHOB
EDC4
RPS28
NDUFA7
KRBA2
C1QTNF8
RPS2
NDUFB10
ARFGAP2
C19orf53
JMJD7-PLA2G4B
JMJD7
SUMF2
MT2A
IFITM2
H2BC21
H2AC21
H2AC20
H2AZ1
DNAJB14
DNAJC9
ARHGDIA
NPDC1
ENTPD2
PRKAG1
COL23A1
TUBB
CEBPB
UCKL1
C12orf57
GPAA1
EXOSC4
MID1IP1
DUSP2
ASTL
SLC3A2
RPL13
NOP53
ARHGAP39
RIT1
COX18
VPS28
ZNF34
RPL8
ABTB1
CLN8
H4C7
H3C7
H2BC9
RGL2
DAPK3
CCDC24
SLC50A1
DPM3
NRAS
PDCD2L
RPL22L1
GRAMD2A
VTI1B
TRIM8
SNAPC5
H3C12
H2BC17
H2AC17
FAM228B
SF3B6
RPS15A
UPF3A
MRPL28
RCE1
CCDC200
PFN1
RNF167
SLC25A11
SSC5D
NAT14
SLC39A7
RXRB
HSD17B8
RING1
CDK11A
CCDC34
ZBTB12
EHMT2
C2
POLG2
PRRT2
PAGR1
P2RY11
IKBKG
G6PD
KMT5B
H2BC8
H2AC8
WDR38
PFDN5
MYG1
ZFX
ZNF48
PDE4A
UBTF
MT1M
MT1E
H1-2
VEZF1
EIF1
PHLDA1
MAML1
ADAMTS10
CHD2
SECISBP2
ATP5F1E
ID1
GTF2A2
H3C2
H2AC4
PIP5KL1
FAM131A
CCDC107
TMEM230
CYRIB
CXorf38
RABL6
SCRIB
GMEB2
LDHC
PHOX2A
DHRS11
H2BC7
H3C4
H2AC7
NADSYN1
DHCR7
HMCES
FTL
CRYAA2
CRYAA
WDR97
MAF1
WBP1
INO80B
TNFRSF12A
THOC6
HCFC1R1
COX20
APOLD1
TRIM37
ARL6IP4
AKAP8
IGF2BP3
POMZP3
FLOT2
ZNF446
H3-3B
H1-10
GGA2
YY1
SCAMP3
CIRBP
CUL7
GANAB
ORAI3
MFSD3
WDR6
CD79A
IDI1
MTA2
IRX3
PYGO2
LOC101928120
RRP36
MEA1
H2AX
HMBS
GPN2
FUT11
GATD3B
GATD3A
H4C5
ANTKMT
APOM
GPANK1
C6orf47
GSTO2
RSRP1
AMDHD2
TMSB10
CDK16
ANAPC4
RPS11
E2F3
H3C8
H2BC10
TOM1
H3C10
H2BC13
H2AC13
GCN1
SCFD1
ZBTB22
TAPBP
STUB1
JMJD8
TIGD5
EEF1D
RHBDL1
H3C13
H2BC18
SH3BGRL3
TUSC2
TSC22D1
TYSND1
ARID5B
OPRL1
LKAAEAR1
TUBB4B
FAM166A
LGR6
ARHGAP4
ELK1
SLC12A6
DPH7
MAPK8IP3
ZNHIT2
FAU
TLCD1
NEK8
TUBA1B
ZNF584
ROPN1L
SEC14L1
RPS29
CENPA
MVB12A
SNAP47
NKIRAS1
RPL15
ICA1L
MRPL53
LRRC24
C8orf82
ROMO1
NFS1
RNASEK
C17orf49
CDKN1C
HNRNPA1
CBX5
UBC
HMGN2
ZNF581
ZNF580
PRKRIP1
CCDC106
UBB
ISY1-RAB43
ISY1
GNE
NOLC1
NPM3
FGF8
CEBPA
KLRC2
ZFP36L1
MLLT6
BASP1
ACP4
RPL10
SIRT7
ZNF703
HDAC10
NDST2
PLPP5
MAD1L1
GMPPB
AMIGO3
CSKMT
C11orf98
UQCC3
LBHD1
MYOZ3
GAGE8
GAGE2E
GAGE2D
GAGE13
ZNF653
C5orf24
MOV10
TEDC2
STYX
PCF11
OSTC
H2BC15
H2AC15
SFN
CAMK2N2
TMEM132A
CDH24
RAB40C
VEGFB
DNAJC4
TRPT1
NUDT22
TBCD
MTFP1
PRMT3
CEMP1
SCGB1C1
SRSF11
IQCG
LMLN
SSH3
ADAT1
TNFRSF6B
SCARF1
RILP
H4C15
H4C14
FBF1
SP3
PIM2
H3C1
H1-1
PCBP4
EPN1
NFKBIA
MFN1
DYRK1B
CCDC97
TBR1
DDAH2
SGSM3
CELF1
NME4
DECR2
SNX16
CKB
PCBP1
INPP5K
RNF223
SCML1
MDP1
CHMP4A
KLHL11
WDR90
TMEM223
TMEM179B
ATF4
TAF10
PDF
ABHD16B
FAM89B
EHBP1L1
TCTEX1D2
POLB
SMIM29
RAB5B
PPP1R15B
CISD3
SRSF4
MYL6
SPATC1L
NME3
MRPS34
EME2
NR3C1
PTOV1
CSNK1G1
ADK
HMGA1
VWA7
DLG4
ACADVL
TUBD1
RPS6KB1
NOL7
ZFP37
MLX
FNBP1
COASY
GAS2L1
VPS4A
C16orf46
PAXX
CLIC3
TTC33
TUT1
KIF2C
SPOUT1
TBK1
MMP24OS
MMP24-AS1-EDEM2
CTNNAL1
SLC25A17
TMUB1
FASTK
GPS2
NFATC3
C8orf76
C11orf91
SLC39A10
DONSON
MST1
LARP1
CHD5
HYAL1
NAA80
HYAL3
CAPNS1
BAZ2A
XRN1
H4C8
SNX14
NUMBL
CEP192
PHLDA2
GET4
CRK
KLC2
BAG2
TNFSF13
SENP3
DMPK
ST3GAL3
S100A6
C19orf71
FBXO31
MAP1LC3B
DCAKD
TMEM107
STAG1
H2BC14
H2AC14
NOL3
RBM4
ABCB6
NOXO1
GFER
TNS2
NUDT17
SELENOO
UBE2C
DUSP1
RASD1
HPDL
CITED4
SRSF2
MFSD11
POLD1
ZNF35
TAOK2
CXCR5
C17orf98
ZASP
SAP25
HES3
NXF1
SLC25A39
MCCD1
INPP5E
SELENOH
RABGEF1
NECAB3
TFPT
PRPF31
GAS1
SPHK2
RPL18
FAM83E
NOP2
LLGL2
RNF225
POMT1
DPP3
PLEC
C7orf26
MLH3
SNX5
MGME1
ANKRD12
RPL19
CACNB1
SURF6
RPLP2
IAH1
PIDD1
CEBPD
ACOX3
URGCP
URGCP-MRPS24
LRP2BP
ANKRD37
TLCD2
PSMB8
NANOS1
IGF1R
LENG9
TTLL3
RAB26
FAM156B
FAM156A
TRAF7
SLC35A2
MAN2C1
TSPAN31
AGAP2
HSPB1
DCK
MYO1G
SLC25A10
HAX1
CELSR3
SREBF2
PTPN6
OR2T1
FIBP
CCDC85B
MROH6
COQ3
ZNF865
SHOX2
RSRC1
AJM1
WDR62
THAP8
ANKRD39
RPS23
ATP6AP1L
C5orf15
MPHOSPH8
IRF2BP1
TIMM13
FADS2
FADS1
MROH1
TENT4A
C20orf144
ACTL10
DPM2
MRI1
MSMP
PYGM
SLC25A42
TXN2
SLC25A6
PTCH1
CS
PFN2
TIGD3
PRR7
GPR137
IL17C
PLEKHN1
OAZ1
CRELD1
ETS2
WDR27
C6orf120
PLCXD1
PABPN1
SLC35B2
ABCF3
PRAF2
GDI1
TEX22
ANP32B
RRM1
ZNF517
FBXO4
RCC2
RPL36
RPLP1
ZNF335
GH1
MAPKAPK5
TSN
RABL2B
RABL2A
SRD5A1
POLR3F
DZANK1
CACTIN
NVL
DYNC1LI2
RPS18
NUP85
ICE1
IPO13
VDAC2
NME6
RWDD1
VPS52
OAZ3
MRPL9
C19orf48
REXO1
MRPS7
GGA3
LYRM4
FARS2
PSMD12
SLC35B1
SUCLG1
ZNF576
IRGQ
NCLN
HSPA9
FAM187A
EFTUD2
CCDC103
TAOK3
SUDS3
CAPRIN1
UBE2I
RBBP5
PSMG2
CEP76
UPF2
GOSR2
POLR2E
EXOSC5
BCKDHA
DCTN1
VARS1
BLCAP
NUP205
MRPS5
HADHB
HADHA
STAM2
HMGB1
PSMD1
ACTR10
CDC73
COX7A2L
POLR2J3
COMMD1
CCT4
STAM
PAK1IP1
C6orf52
TSNAX
SEC61B
ALG2
SUPV3L1
SART3
ISCU
PI4KB
RABGGTB
MRPL40
HIRA
SKP1
USP1
PDAP1
BUD31
PES1
NDUFA4
EPN2
PTGES2
ZRANB2
FAM174C
UGT1A3
FARSB
ATP5MG
KMT2A
EIF4ENIF1
RPL21
TAF9
RAD17
AK6
TM9SF1
SELENOF
HS2ST1
RPS27A
CLHC1
BRWD1
VPS9D1
PNO1
PIN4
EIF2S3
NFKBIL1
DDX39B
ATP6V1G2
MRPL24
PDHX
APIP
AXDND1
RPL13A
PNMA1
VARS2
EXOSC6
SEC31A
BAG6
PCBD2
ZNF513
RCOR3
CCDC138
GADD45GIP1
TMED1
PIP4K2B
DRAP1
C11orf68
ENO3
ANAPC7
CD320
GOLGA5
TBCK
AIMP1
NOP14
GRK4
MRPL38
RXYLT1
ECI1
SNAPC4
MRTO4
EMC1
IMPDH2
SMC2
LAMP1
FDX2
YJU2
TYMP
SCO2
RNF151
RHOT2
H3-3A
TTC8
GLRX2
NDUFS3
MATR3
KBTBD4
TOB2
LMNB1
NAPRT
DPH6
GTF2IRD2B
THOC5
OR6B2
NDUFA10
USP21
DYNLL1
GTF3C4
DDX31
ARF3
SLC39A1
CRTC2
SNX9
IRF2BP2
FAM104A
C17orf80
BICRA
RPL35A
SRRT
RABGAP1
SAR1A
CSNK2B
CCDC78
KIF27
TTYH2
ATXN2
RBKS
BABAM2
DENR
RPN1
AGO3
TSC1
GFI1B
BCAP29
HOXA3
PATZ1
CALM2
RPS12
CNPY2
HSPA1B
SPEN
MEMO1
POLR2C
FSTL3
RPL7
RDH10
GAGE2C
GAGE2B
GAGE2A
DENND4B
ENAH
GAGE7
GAGE6
GAGE5
GAGE4
GAGE12I
GAGE12F
GAGE12B
WDR24
POM121C
LRP6
SAMD1
PWP2
LOC102724159
LRRC6
CDK12
SRCAP
LOC730183
TXNIP
TLL2
PPFIA4
PACS1
H2BU1
H2AW
USP34
GINS2
PPP1R37
ADNP
ROGDI
SFT2D3
HYAL2
LRRC37A3
PROSER1
NHLRC3
HNRNPU
TMPPE
GLB1
AP3M1
RECQL4
MARCHF6
LRRC14
PAXBP1
PPP3CB
MLXIP
EIF4A1
TUBGCP6
ASB13
TRIM52
ZBTB37
CSRNP2
PURA
ANKLE2
PNRC1
GPX1
OTUD7B
LBR
ISL2
TBC1D13
DCDC2
ZNRD2
PHIP
PAF1
CENPVL3
TRIM45
ATXN7L2
STMP1
SF3B3
COG4
C7orf25
IFRD2
MTMR10
DPY19L4
NAXE
RPL6
WDR74
EIF2D
MORC3
DNAJC21
UFM1
NPRL3
C8orf37
TRMU
ACTN4
ZNF398
TARBP2
MAP3K12
CCDC130
ZNF341
LONP1
CATSPERD
SETD5
RPL35
LRR1
MRPL12
METTL8
DCAF17
NUDT16L1
SETD6
TARS3
KLF9
SOD2
APTX
ZBTB2
XPNPEP3
ST13
DNAJB7
CMTR1
RASA4B
PPARA
MADD
CUL9
POLDIP3
TP53BP2
RICTOR
TRIM3
OVCA2
MIF4GD
HAGHL
SFXN4
COMT
STRIP1
GADD45A
CDK9
TLE3
SRA1
RUVBL1
CTNNB1
DGKZ
C17orf75
HYI
ZCWPW1
MEPCE
JPT2
SIGMAR1
CLK3
EGLN1
KLF12