ChIP-Atlas: Target genes

Potential target genes for CPSF3

Query protein: CPSF3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10448666 | HeLa
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
CPSF3's Target genes

◢ CPSF3: Average

◢ SRX8018228: 293

◢ SRX8018229: 293

◢ SRX8018230: 293

◢ SRX8018231: 293

◢ SRX10448664: HeLa

◢ SRX10448665: HeLa

◣ SRX10448666: HeLa

◢ SRX10448667: HeLa

◢ SRX5441330: HeLa

◢ SRX5441331: HeLa

◢ SRX5441334: HeLa

◢ SRX5441335: HeLa

◢ SRX9237243: K-562

◢ SRX9237244: K-562

◢ SRX9237245: K-562

◢ SRX9237246: K-562

◢ SRX8945051: U2OS

◢ SRX8945057: U2OS

◢ CPSF3: STRING

PGK1
FRG2C
H2BC4
H2AC6
MTRNR2L2
MSH3
DHFR
MTRNR2L1
SYCE2
ZC3H10
RPL41
DHPS
C6orf226
H2BC11
H2AC11
H4C9
JUNB
FRG2
PHF1
TMEM107
H2BC5
H1-4
DUX4
H4C12
PHF23
DVL2
EPN2
SLC38A2
B3GALT4
RPS18
NDUFAF3
DALRD3
IER3
FLOT1
MID1IP1
H2BC12
H2AC12
IFITM1
IFITM3
H4C3
H1-6
UBE2M
CHMP2A
MTRNR2L8
GADD45B
C19orf53
FIBP
CCDC85B
RPL17-C18orf32
RPL17
C18orf32
H3C15
H3C14
H2AC19
H2AC18
ZFP36L1
GTPBP6
H4-16
H2AJ
ID3
KRBA2
EDC4
H4C2
H4C1
E2F3
MSH4
SUMF2
C12orf57
H4C11
ARHGDIA
ARHGAP39
DNAJC9
IER5L
STX10
IER2
NADSYN1
DHCR7
SYNRG
JMJD7-PLA2G4B
JMJD7
RCC1
SCRIB
MAZ
ATAT1
NRAS
SNAPC5
SSC5D
NAT14
RHOB
H4C7
H3C7
H2BC9
IFITM2
PRKRIP1
VPS28
H1-2
MRPL53
FTH1
PDE4A
H2BC21
H2AC21
H2AC20
NOP53
RPL22L1
VEZF1
COX20
POLG2
CHD2
SIRT7
TMSB4X
HES7
ALOXE3
CAPNS1
ZNF34
RPL8
CNOT3
RRP36
MEA1
NAT10
KMT5B
H2BC8
H2AC8
DDIT4
ADM
ARFGAP2
TUBB
PFDN5
MYG1
IRF2BP2
DDAH2
TRIM8
HMCES
FAM131A
MPDU1
LOC100996842
CD68
ZNF581
ZNF580
STAG1
UBTF
AMDHD2
ZNF446
H3C12
H2BC17
H2AC17
SNX14
KIF2C
MRPL40
HIRA
GPN2
FADS2
FADS1
RPL13
SIX5
SAR1A
H2AZ1
DNAJB14
GGA2
CSKMT
C11orf98
UQCC3
LBHD1
HPDL
HMGN2
RPS2
NDUFB10
RNF151
PRKAG1
PSMG1
CXorf38
INPP5E
CIRBP
ABTB1
CITED4
CDKN1C
CUL7
GTF2A2
SLC3A2
C5orf24
ZBTB45
ARID5B
TUSC2
RIT1
MT2A
H2BC7
H3C4
H2AC7
PHLDA1
IKBKG
G6PD
SLC25A39
H3C2
H2AC4
FAM228B
SF3B6
AKAP8
RAD23A
PFN1
RNF167
SLC25A11
ENO3
WDR90
UBB
ZNF653
PRAF2
DUSP2
ASTL
MST1
RPL10
VTI1B
TNFRSF12A
THOC6
HCFC1R1
PYGO2
LOC101928120
SLC39A7
RXRB
HSD17B8
RING1
PCBP4
CCDC107
TUBB4B
FAM166A
FLOT2
S100A6
MOV10
ARHGAP4
VWA7
WBP1
INO80B
CEBPB
MT1M
MT1E
H2AX
PNMA1
HMBS
RPS28
NDUFA7
RAB40C
SECISBP2
PRRT2
PAGR1
CDK11A
PHF8
POMZP3
FTL
METTL8
DCAF17
TOB2
STUB1
JMJD8
PCBP1
JADE2
PATZ1
H3C13
H2BC18
CYRIB
IGF2BP3
WDR6
PCF11
APOM
GPANK1
C6orf47
CSNK2B
PHLDA2
TYMP
SCO2
THOC5
RPS23
ATP6AP1L
GAPDH
ID1
SH3BGRL3
H2BC15
H2AC15
ARL6IP4
IRF2BP1
SFN
RPS11
KLF6
H4C5
ROPN1L
NXF1
SCAMP3
TCTEX1D2
PDCD2L
DHRS11
SFT2D3
TRMT112
PRDX5
DYNLL1
FIGN
EPN1
GMEB2
TEDC2
RABL6
ACTN4
CCND1
ISL2
GSTO2
PWP2
LOC102724159
RNASEK
C17orf49
TMSB10
H3C1
H1-1
ATF4
CCDC24
NOLC1
LRRC24
C8orf82
ELK1
DUSP5
CCDC34
N4BP2
RGL2
TLE3
MDP1
CHMP4A
SP3
ZNF35
SPEN
SRSF11
MAML1
PHOX2A
ZNF48
DAPK3
MAD1L1
SRSF4
H3C8
H2BC10
COL23A1
TRIM37
FUT11
QSER1
CD79A
IGF1R
PNRC1
ING1
ANTKMT
CCDC78
HNRNPA1
CBX5
TFAM
SPOUT1
MTA2
FSTL3
RCC2
LMNB1
TIGD5
EEF1D
COX18
LDHC
FDX2
IQCG
LMLN
RSRP1
ZFX
CCDC200
SNAPC4
SGSM3
LONP1
CATSPERD
C16orf46
NANOS1
H3C10
H2BC13
H2AC13
C1QTNF8
ANKH
PNPLA6
CD320
MLLT6
MRPL28
GATD3B
GATD3A
LENG9
H4C8
PIM2
ISY1-RAB43
ISY1
LRP8
HMGA1
ZCCHC14
MTIF3
EIF1
DNAJB4
WDR38
CDK16
KLHL11
RPS15A
MAN1B1
NDST2
MATR3
DPH7
UCKL1
ETV6
SEMA4C
TRIM45
GPAA1
EXOSC4
SNAP47
STYX
LARP1
SLC25A10
BCL6
NPDC1
ENTPD2
INPP5K
SHOX2
RSRC1
FANCC
RPL27A
POLR3D
H4C15
H4C14
TMEM230
XRN1
GINS2
PPP1R37
GTF2A1
SF1
DONSON
SCFD1
CENPA
YY1
FAM117B
ZNF782
LINGO1
GRAMD2A
LAMP1
APOLD1
CCNT1
RANGRF
GMPPB
AMIGO3
CDH24
IRX3
WBP1L
MYL6
TNS2
TPCN1
IQCD
POLD1
SLC50A1
DPM3
CAMK2N2
ADK
BORCS6
AJM1
SEC14L1
PTMS
LAG3
CEP192
SLC6A9
CDKN2A
GINS3
TOM1
P2RY11
FAM89B
EHBP1L1
ZNRD2
IFRD2
TBR1
SNX16
VGF
RPS29
GAS2L1
OAZ1
FBF1
ARF3
TLCD2
PANK1
MAP3K1
CCDC106
ATXN2
PSEN1
TNFRSF6B
ZBTB2
SMIM29
LRFN4
TAS1R3
WDR97
MAF1
TIMM13
DYRK1B
ABCB6
ZBTB22
TAPBP
ACTRT3
MYNN
IMPDH2
ACVR2B
SMTN
MAPK8IP3
PAIP2
SPATC1L
BAG2
TYSND1
MTMR10
C8orf37
GANAB
JUN
CRYAA2
CRYAA
TLL2
KRT10
C1orf56
URGCP
URGCP-MRPS24
RAB23
CRK
PXDC1
RPUSD1
CHTF18
VPS9D1
ARID1A
CCDC138
ORAI3
TBK1
VARS2
C19orf71
NUDT17
SIGMAR1
ARID3C
FAM76B
CEP57
SERINC4
HYPK
DENND5B
SURF6
HDAC10
CALM2
RAB1B
ABCA7
USP22
RHOT2
UBC
SAMD1
PRMT3
BASP1
PKM
SORBS2
C19orf67
DRAP1
C11orf68
AGO3
SMG9
NPM3
FGF8
TTC33
WDR24
NOL3
ACOX3
GCN1
HAX1
MVB12A
PHF10
CYC1
C1QBP
CSGALNACT1
CELF1
KAZALD1
MED10
KIF27
PRKDC
MCM4
NCOA5
PMS1
ORMDL1
TRIM25
USP34
H2BC14
H2AC14
CEBPA
DMPK
PLEKHN1
TSC22D1
LLGL2
MRPL12
SLC30A7
EXTL2
PIP5KL1
MLXIP
TEX45
PXDN
ZBTB12
EHMT2
C2
SNX5
MGME1
POLB
PTPN6
PTP4A1
MYC
ZNF513
TMEM243
ARF6
E2F5
CEBPD
JUND
NME6
TMEM223
TMEM179B
ICA1L
SETD5
KLF9
SGF29
MNT
DPP3
COX8A
VAV2
SELENOH
TXN2
PTAR1
TBXA2R
CTNNAL1
CHD7
MMP24OS
MMP24-AS1-EDEM2
ROMO1
NFS1
OVCA2
YWHAH
SPHK2
CS
CRELD1
ILF3
KLC2
ZFP36
EFCAB13
PLEKHG2
BAZ2A
H3-3B
SREBF2
GPR137
HAGHL
BAD
SLURP1
PMM1
ATP5F1E
TAF10
AQP11
KMT2E
BCAR3
TCIRG1
SRSF2
MFSD11
GDF15
ZNF143
RRS1
ADHFE1
MLX
COASY
LRP2BP
ANKRD37
YAP1
ARID2
CUX1
PGGT1B
TGIF1
MARCHF6
ADAT1
CLN8
CHD5
PIP4K2B
FOXO3
TRADD
HSF4
FBXL8
PCMTD2
CPT1A
NAPRT
SLC39A1
CRTC2
RECQL4
PLPP5
LRRC14
SLC25A28
SQSTM1
NME3
MRPS34
EME2
TTYH2
POLR2H
CLCN2
BCOR
USP8
TLCD1
NEK8
GTF2IRD2B
ANAPC4
LRP6
UBE2C
MTFR2
LRPPRC
EIF4A1
WDR74
NTN3
MKNK2
FBXL14
TBC1D24
TUBA1B
SLC35B2
LPCAT3
RPL18
FAM83E
SCARF1
RILP
CCDC97
MYOZ3
C8G
FBXW5
RASD1
USP3
UNC13D
ZNF217
SLU7
PTTG1
DCTN6
NKIRAS1
RPL15
H1-10
VEGFB
DNAJC4
TRPT1
NUDT22
NEIL1
CDC6
LIFR
APTX
ZNF696
ENOSF1
SGK1
TAF9B
ZFP64
SEMA4B
CXCR4
GET4
VPS4A
HDAC7
RUNX1
SRGAP2C
FAM72B
FOSB
FBXO31
MAP1LC3B
NFIB
CYTH1
MROH6
CXCR5
THAP7
MTCL1
NDUFS3
KBTBD4
FNBP1
HOXA3
DPH2
B4GALT2
ATP6V0B
HOXA5
HOXA6
PERP
TCIM
LBR
TSFM
C16orf71
ANKS3
TAF4
ACP4
GADD45A
DCAKD
RAB26
TRAF7
ARID1B
PHF14
NOXO1
GFER
NARF
MACIR
GABARAPL1
MT1X
ETV4
SRA1
SORT1
REEP4
XBP1
STXBP3
PRPF38B
INPPL1
BCAP29
RNF225
RABGEF1
TMUB1
FASTK
RNF223
USF2
RPRML
FUT8
TRIM47
GRK6
SLC25A6
FAM199X
KPNB1
SOGA1
TRIM52
ANKRD12
CHEK1
TAF2
STK19
DXO
TMEM132A
TUBGCP6
TRIM3
GABARAP
JOSD2
ASPDH
LDHA
CSNK1G1
MFSD3
AGAP11
ADIRF
SPRY1
CFD
SETD6
ELOVL1
AGBL2
CDC20
RABGAP1
HYKK
TIMMDC1
ZDHHC5
XXYLT1
SLC9B1
PAXX
CLIC3
SMG7
TFAP2A
THEM4
ADAMTS10
RPL19
SELENOI
ADGRF3
CCDC169-SOHLH2
CCDC169
SDC1
SERF2
ELL3
TTLL3
SLC35A2
INO80D
CRACR2B
OTUD5
SRCAP
LOC730183
PHIP
MIF4GD
SPTAN1
TMEM158
FERMT1
C1QTNF6
DLX1
RCE1
RBM4
NFATC3
ARPC3
C17orf98
PPP1R15B
WDR62
THAP8
ABHD16B
BTG1
PDF
PHPT1
MAMDC4
ZBTB25
ZBTB1
RPS15
SINHCAF
RHOQ
ATP6V1E2
EXOSC6
SELENOO
STXBP2
PCP2
CTPS1
CLDN7
GPS2
SRRT
HSPB1
DUT
TTC3
PIGP
TXNDC5
LRRC73
NAA35
PBLD
HNRNPH3
GATAD1
SMAGP
YIF1A
TMEM151A
SPPL2B
LSM7
RUNX2
JPT2
MFN1
ARSB
LONRF1
MFSD1
ZSCAN31
ZNF865
FBXO4
NR4A2
RBMX
STMP1
NUDT16L1
TFAP4
MRM1
COA6
SSH3
FNDC3B
ARRB1
UBL4A
LAGE3
BRWD1
CCDC130
IAH1
FAM161A
RARS1
BRD3
IL17C
ELOVL6
C7orf26
C7orf25
HNRNPF
PAK2
GOLPH3
ERAP1
LBX2
PCGF1
RHBDL1
MADD
ZNF451
TNFSF13
SENP3
DDX56
FOXD4L5
ABCF3
LTC4S
VPS45
DNM2
IL34
SNTB2
EXT1
PDE10A
POLR2J3
POM121C
ATXN2L
RRAGC
H2AB3
H2AB2
H2AB1
F8A3
F8A2
F8A1
CIPC
MPHOSPH8
SLC16A3
RPL7
RDH10
RPLP2
SFXN4
PIDD1
RPL37
SLC35E2B
TBC1D22A
RHOV
CARD6
SPIDR
PSRC1
MAFG
LSM8
TRMU
ZNF584
FOS
IFITM5
CDC42EP2
NR3C1
MICAL3
ATF3
EVA1B
WNK1
TYW1
SBDS
PITX3
GBF1
PPIA
UPF3A