ChIP-Atlas: Target genes

Potential target genes for CPSF3

Query protein: CPSF3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5441331 | HeLa
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
CPSF3's Target genes

◢ CPSF3: Average

◢ SRX8018228: 293

◢ SRX8018229: 293

◢ SRX8018230: 293

◢ SRX8018231: 293

◢ SRX10448664: HeLa

◢ SRX10448665: HeLa

◢ SRX10448666: HeLa

◢ SRX10448667: HeLa

◢ SRX5441330: HeLa

◣ SRX5441331: HeLa

◢ SRX5441334: HeLa

◢ SRX5441335: HeLa

◢ SRX9237243: K-562

◢ SRX9237244: K-562

◢ SRX9237245: K-562

◢ SRX9237246: K-562

◢ SRX8945051: U2OS

◢ SRX8945057: U2OS

◢ CPSF3: STRING

RABL2B
ZNF335
RABL2A
TSN
SRD5A1
MAPKAPK5
DYNC1LI2
NVL
CACTIN
NUP85
ICE1
PSMD12
MRPS7
GGA3
POLR3F
DZANK1
NCLN
VDAC2
GOSR2
REXO1
OAZ3
MRPL9
C19orf48
HSPA9
BLCAP
NME6
IPO13
POLR2E
SUCLG1
UBE2I
TAOK3
SUDS3
CAPRIN1
EXOSC5
BCKDHA
SLC35B1
FAM187A
EFTUD2
CCDC103
RWDD1
ZNF576
IRGQ
MRPS5
ACTR10
RBBP5
COX7A2L
DCTN1
VTI1B
PSMD1
CDC73
PES1
SEC61B
ALG2
COMMD1
CCT4
SART3
ISCU
UPF2
HADHB
HADHA
LYRM4
FARS2
RABGGTB
TSNAX
PSMG2
CEP76
FARSB
NDUFA4
PDAP1
BUD31
STAM
PI4KB
MTRNR2L8
SUPV3L1
NUP205
MTRNR2L1
STAM2
SKP1
PNO1
RPL21
USP1
ZRANB2
IER3
FLOT1
PAK1IP1
C6orf52
ATP5MG
GOLGA5
PHF23
DVL2
SELENOF
HS2ST1
VARS1
GADD45GIP1
B3GALT4
RPS18
VPS52
PTGES2
KRBA2
TAF9
RAD17
AK6
ANAPC7
SNAPC5
RPS27A
CLHC1
PDHX
APIP
AXDND1
NFKBIL1
DDX39B
ATP6V1G2
EIF2S3
SMC2
EIF4ENIF1
MRTO4
EMC1
TTC8
PIN4
ZC3H10
RPL41
TM9SF1
IQCG
TMED1
RPL35A
ZBTB37
RPS11
RPL13A
C6orf226
RPS23
ATP6AP1L
SLC3A2
ATP5F1E
VPS28
ADK
AP3M1
H4C15
H4C14
PCBP1
DPH6
SF3B3
COG4
H2BC4
H2AC6
OR6B2
NDUFA10
SCRIB
RXYLT1
AMDHD2
BICRA
SUMF2
RBKS
BABAM2
SYCE2
NRAS
MRPL38
H4C12
RPL22L1
RPS12
H4C11
GLRX2
UFM1
DENR
XPNPEP3
ST13
DNAJB7
DGKZ
RPL17-C18orf32
RPL17
C18orf32
OAZ1
FAM104A
C17orf80
APOM
BAG6
ARFGAP2
CDK12
PYGO2
LOC101928120
EDC4
MPDU1
LOC100996842
CD68
DDIT4
RNF225
MRPL24
PAF1
GORAB
MTRNR2L2
MSH3
DHFR
ARHGDIA
RPN1
PROSER1
NHLRC3
SYNRG
PCBD2
ANKLE2
ALKBH5
H3C15
H3C14
H2AC19
H2AC18
H4C3
H1-6
HSPA1B
H1-2
UBE2M
CHMP2A
GTF3C4
DDX31
DNAJC9
GET4
H2BC21
H2AC21
H2AC20
RPS2
NDUFB10
RNF151
RNASEK
C17orf49
PRKAG1
EXOSC6
ABTB1
RGL2
H2BC5
H1-4
DDAH2
LAMP1
JUNB
SIRT7
RPS29
LRR1
INPP5E
SRSF11
LRRC40
RPL12
LRSAM1
ZNF34
RPL8
CUL7
TBCK
AIMP1
CMTR1
RPL7
RDH10
VPS9D1
NDST2
POLG2
PHF1
STK36
RNF25
FAM131A
ZCWPW1
MEPCE
EPN1
MAZ
PRRT2
PAGR1
CISD3
BNIP3
CNPY2
TUBB
RPL10
RIT1
RHOT2
LMAN2
VARS2
SPHK2
RPL18
FAM83E
RPS10-NUDT3
RPS10
C19orf53
ID3
PRKRIP1
SURF6
ZBTB45
TRAP1
PFDN5
MYG1
ZNF581
ZNF580
NAPRT
TSC22D1
TTC33
TTYH2
ZNF383
RAD23A
BTBD10
GPAA1
EXOSC4
PFN1
RNF167
ENO3
ATAT1
MSH4
RRP36
MEA1
TIMM13
CCDC34
SMG5
TMEM79
POLDIP3
SEC11C
H2AZ1
DNAJB14
SGSM3
WDR90
RPL19
AGAP11
ADIRF
ACP4
SLC39A13
HMCES
HOXA3
RICTOR
HOXA5
HOXA6
MOV10
GCN1
RPL6
ARHGAP11A-SCG5
ARHGAP11A
RPLP0
OSGEP
APEX1
MMP24OS
MMP24-AS1-EDEM2
C19orf71
DHRS11
RPL13
TMPPE
GLB1
RCOR3
ID1
CD320
CLUAP1
C16orf90
SECISBP2
SPCS1
GLT8D1
ECI1
HES7
ALOXE3
POLD1
ROGDI
SF3A3
FUT11
DPH7
POLR2J3
TMSB10
VWA7
ARF3
LRRC37A3
CENPBD1
ATXN2
PPARA
H4-16
H2AJ
LLGL2
ARHGAP4
LRRC24
RECQL4
LRRC14
GABARAP
STYXL1
NOP53
SLC25A10
ACTB
FTH1
H4C8
MRPL34
ABHD8
DDA1
HDAC10
GGA2
STUB1
JMJD8
MRPL53
C8orf82
JMJD7-PLA2G4B
JMJD7
SLC25A11
CD79A
CELF1
ZMIZ2
TRIP4
RHOB
COMT
STRIP1
TXNRD2
PSMD5
NAT10
EIF4A1
SCAMP3
FAM174C
CCAR2
C8orf58
DHPS
GTF2IRD2B
POMZP3
GPS2
CYBA
TBC1D13
SLC26A11
SGSH
NDUFAF3
DALRD3
NDUFS3
KBTBD4
SRRT
BAZ2A
WDR6
NUF2
H2AC16
H1-5
NDUFS7
LDHC
ARHGEF1
TMEM107
PUF60
COMMD2
PNMA1
MAP2K2
RPL37
MRPL40
HIRA
H3C13
H2BC18
CDK11A
ADPRHL1
SLC39A7
RXRB
HSD17B8
RING1
CRELD1
H4C2
H4C1
H3C2
H2AC4
H3C1
H1-1
NOP14
GRK4
SIGMAR1
ARID3C
SIX5
TSPAN10
NPLOC4
H2BC11
H2AC11
NECAB3
DRAP1
C11orf68
LRP6
NOTCH2NLA
XRN1
ABCB6
CS
PDCD6
ERCC1
TUBA1B
DPY19L4
TCHP
MAD1L1
NPAS4
SHMT2
LIFR
WDR70
MAPK8IP3
TMEM43
CHCHD4
PAIP1
SELENOH
POLR2J
ARHGAP12
ZNF446
GNG3
BSCL2
ISG20
ZNF653
GRAMD2A
ASB13
SCAP
C5orf24
AURKAIP1
ERGIC2
GPN2
RCE1
LBR
ZNF341
TATDN3
NSL1
H4C9
FLOT2
RNF166
CTU2
C12orf57
PTPN6
SDE2
CHD2
C7orf26
ZNF770
GAPDH
TAOK2
PMF1-BGLAP
PMF1
AKAP8
THOC5
ZFP36
TRIP13
BRD9
PIGO
NXF1
HNRNPU
CSNK1G1
DNAJB12
NCBP3
SDHA
CCDC127
ABCF1
KIF2C
TMEM267
NFAT5
FBXW9
VPS50
HEPACAM2
H2BC12
H2AC12
NME3
MRPS34
EME2
SCAMP5
DIDO1
ERCC6L2
SSBP1
CUL9
SNX22
ECHS1
WDR47
H2BC7
H4C5
MATR3
SMN2
SMN1
SHTN1
TMEM39B
C16orf46
POLR2C
CHD8
EHMT1
BCAP29
PACS1
PCBP2
CCDC138
SLC39A1
CRTC2
RAB5B
GRB2
COX20
LMLN
ASXL1
RUVBL1
EEFSEC
ZDHHC23
NELFA
ORAI3
MARCHF6
PURA
ANKFY1
SPATA25
NEURL2
CTSA
SMDT1
CCDC43
GSTA4
CTNNB1
MTF2
TOMM20
LPCAT1
MYO18A
CCDC86
GADD45B
TMSB4X
DSTYK
ZNF511
TUBGCP2
ARMH3
IREB2
TRMT2A
RANBP1
MEMO1
TXN2
GBA
GAA
MTIF2
SPATC1L
TYSND1
ROPN1L
OTUD7B
B4GALT7
GTPBP6
PTCD1
CPSF4
RAB3IL1
NOTCH2
MDM4
DCXR
SLC15A4
CDC5L
SMIM29
TCF3
AHRR
RMI1
HNRNPK
TOM1
ANTKMT
CCDC78
THEM4
NOP2
DRG2
EIF3F
PDCL3
ILF2
PRICKLE4
FRS3
NOLC1
NME4
DECR2
TUBGCP6
ATXN7L2
RAD9A
EXOC3
MRPS23
TLCD1
NEK8
CIRBP
GPANK1
C6orf47
CSNK2B
EIF2D
HYAL1
NAA80
HYAL3
NDUFB2
RAB26
TRAF7
CHD1L
PRKAB2
SKA3
MRPL57
RPS28
NDUFA7
CYRIB
PCBP4
SLURP1
TRAF4
NT5C
KRT18
FBF1
ADM
TAF2
ICMT
KLHL12
RPP40
TAS1R1
NOL9
BRIX1
TRIM37
BHLHE40
NSFL1C
SLC29A1
OSMR
TNFRSF12A
THOC6
HCFC1R1
CLCN7
LRRC59
TGOLN2
ZNF286A
GSTO2
TSFM
MCOLN1
CALM1
JOSD2
ASPDH
TMEM139
CASP2
RNPS1
VEZF1
SNAP47
ZNF76
JMJD4
KLHL15
AFF4
CLPTM1L
SLC39A4
CPSF1
TOMM6
ZNF583
CYB561
HASPIN
CSRNP2
DCP1A
CD63
GPX1
SSX2IP
ANKRD13C
LTBR
TDP2
ACOT13
SFXN4
SYT7
GABPB2
WDR74
RPLP1
AKAP1
RSAD1
RBL1
MED1
MAN2C1
SLC50A1
DPM3
UPF3A
RIPK1
SLC45A4
PABPN1
CCDC130
CEMP1
MADD
IFI35
AGL
WDR11
SNTB2
AGO3
RABIF
AMZ2
B3GAT3
FAM162A
CCDC58
FKBP5
SUGCT
MPLKIP
TMEM170A
RPS26
NOC3L
TMEM223
TMEM179B
GADD45A
KDM6B
CIAO3
BAX
FIS1
ATP6V1H
PRSS8
CXorf38
USP21
ATAD2
NOTCH2NLC
WASHC2A
NR4A1
H2BC8
H2AC8
EIF4H
NAA60
MBTPS2
ENDOV
LARP1
H3C8
H2BC10
FAM156B
FAM156A
ENOSF1
DNAJC25-GNG10
DNAJC25
HNRNPA1L2
IRF9
HMGB1
YAP1
GNE
PLEKHG2
ZNF296
GEMIN7
SLC52A2
FBXL6
TMEM249
USPL1
DAGLA
SH3GL1
CHAF1A
BRWD1
FIBP
CCDC85B
SLC35B2
TIPIN
ERBB3
INPP5K
RASA4B
KAT6A
CEP350
YARS1
S100PBP
PGAM5
SIRT4
MRPS18C
HELQ
NOC4L
DDX51
KMT2A
SH3BGRL3
ABCF3
TONSL
PBLD
HNRNPH3
HSPB1
GPRC5A
HIBADH
CAPNS1
WDR62
THAP8
GTF2H2C_2
GTF2H2C
AMACR
RRP1
SCAND1
PPP6C
TRIM8
CCDC24
P2RY11
SRA1
FOXJ3
TAB3
BMF
MRPL28
VPS4A
MVB12A
PRDX1
DDX56
QRICH1
RRP8
ILK
TMEM68
TGS1
POLG
SGPP1
MLXIP
NOTCH2NLB
STX18
TMEM222
ATXN1L
UCKL1
PPFIA4
DPY19L3
TMEM101
NUP133
NEK2
YOD1
PFKFB2
GANAB
MLX
MTA2
RBM4
COASY
POP5
JUND
PUS7
NADK
SUPT16H
SMPD1
MRPL12
NTMT1
FOXRED2
CLCC1
TSKU
HELLS
JRK
PPP6R1
ZBTB7A
TBL3
H4C7
H3C7
H2BC9
TAF10
SEC31A
PIP4K2B
HAX1
FDX2
ZNHIT2
TRMU
FAU
JPT2
MROH6
PMM1
DCAF10
KIF21A
CNOT6
SNAP29
PI4KA
SOCS3
TTC17
MET
BANP
C10orf143
ATF4
PDF
CLK3
STPG3
NELFB
IPO9
MED23
CBX2
ZYG11A
UHRF2
TAF13
NANOS1
ADAT1
ZNF131
SERTAD1
SNX29
TMEM132A
ZFP36L1
ZFX
CCDC106
MTARC1
COX5A
GGA1
ARFGAP3
NAPA
TCTEX1D2
LRRC8D
UBE2J2
SPIRE2
PSMG4
BPTF
AKIRIN1
KCNK1
SRSF4
FAM207A
VCP
COG2
RPP21
TBL1X
HDHD2
TJP1
TJP3
ADGRL1
GTF2A2
RFX1
LUC7L2
SLC24A1
INTS14
PARVA
L3HYPDH
JKAMP
MRM1
ADAMTS10
MKRN2OS
MKRN2
TM7SF3
MRPL58
MLST8
BICD1
NFYC
PGAP6
CDK5RAP1
ZBED5
ARHGEF5
TRA2B
MRPL3
GALE
GXYLT1
ABCA3
OTULIN
MRPL45
DUS3L
IFITM1
IFITM3
MDP1
CHMP4A
CELSR3
TOR1AIP2
TOR1AIP1
ZNF346
DYRK3
NADSYN1
DHCR7
TUBB4B
FAM166A
ZNF865
DENND4B
CCNT1
BUD13
PTPN4
B9D1
ZFP1
ATR
MAPK7
AXL
SSH1