ChIP-Atlas: Target genes

Potential target genes for CPSF3

Query protein: CPSF3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX9237243 | K-562
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
CPSF3's Target genes

◢ CPSF3: Average

◢ SRX8018228: 293

◢ SRX8018229: 293

◢ SRX8018230: 293

◢ SRX8018231: 293

◢ SRX10448664: HeLa

◢ SRX10448665: HeLa

◢ SRX10448666: HeLa

◢ SRX10448667: HeLa

◢ SRX5441330: HeLa

◢ SRX5441331: HeLa

◢ SRX5441334: HeLa

◢ SRX5441335: HeLa

◣ SRX9237243: K-562

◢ SRX9237244: K-562

◢ SRX9237245: K-562

◢ SRX9237246: K-562

◢ SRX8945051: U2OS

◢ SRX8945057: U2OS

◢ CPSF3: STRING

FRG2C
MTRNR2L1
FRG2
DUX4
MAPKAPK5
UGT1A3
HMGB1
ZNF335
COL23A1
MTRNR2L2
MSH3
DHFR
GTPBP6
USP17L22
USP17L20
LRRC6
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
GAGE2C
GAGE2B
GAGE2A
CCDC200
POLR3F
DZANK1
SUCLG1
GAGE7
GAGE6
GAGE5
GAGE4
GAGE12I
GAGE12F
GAGE12B
NUP205
ZNF576
IRGQ
GAGE1
NVL
TSC1
GFI1B
STAM2
C19orf48
CCNG2
HBQ1
HBA1
ZWILCH
RPL4
H2BC11
H2AC11
CACTIN
RWDD1
LYRM4
FARS2
SUPV3L1
CRYAA2
CRYAA
SLC35B1
DCDC2
RBBP5
PAK1IP1
C6orf52
H3C15
H3C14
H2AC19
H2AC18
H2AX
CALM2
HBZ
PDAP1
BUD31
H2BU1
H2AW
HBE1
TSN
KMT2D
EIF4A2
USP17L11
USP17L21
USP17L12
LRP6
OPRL1
LKAAEAR1
H4C11
FTH1
RCC1
TXNIP
SLC3A2
H2BC21
H2AC21
H2AC20
PAXBP1
GAGE8
GAGE2E
GAGE2D
GAGE13
TSPOAP1
ZC3H10
RPL41
GH1
RABL2B
B3GALT4
C6orf226
PGK1
RABL2A
PHF23
DVL2
SRD5A1
H2BC4
H2AC6
EDC4
VPS28
SNAPC5
RPL17-C18orf32
RPL17
C18orf32
VTI1B
SYCE2
DYNC1LI2
RPS18
KRBA2
H4C12
NUP85
ICE1
SUMF2
UBE2M
CHMP2A
H2AZ1
DNAJB14
IER3
FLOT1
VEZF1
IPO13
COX20
PHF1
SCRIB
VDAC2
H4C3
H1-6
NME6
H2BC5
H1-4
MAZ
SYNRG
VPS52
OAZ3
MRPL9
NRAS
REXO1
ATAT1
POLG2
DHPS
JUNB
MRPS7
GGA3
PSMD12
MTRNR2L8
H4C15
H4C14
MPDU1
LOC100996842
CD68
C19orf53
AMDHD2
RRP36
MEA1
DNAJC9
NCLN
H1-2
HSPA9
FAM187A
EFTUD2
CCDC103
TAOK3
SUDS3
CAPRIN1
ZNF34
RPL8
H4C9
UBE2I
ID3
CUL7
FAM131A
NAT10
H4C2
PSMG2
CEP76
UPF2
GOSR2
POLR2E
SECISBP2
EPN1
RIT1
MSH4
AKAP8
ARFGAP2
EXOSC5
BCKDHA
H4-16
H2AJ
CHD2
IFITM1
H4C1
RPL22L1
NDUFAF3
DALRD3
IFITM3
DCTN1
INPP5E
VARS1
PRRT2
PAGR1
BLCAP
H2BC12
H2AC12
ATP5F1E
APOM
DDIT4
RPS11
MRPS5
HADHB
HADHA
H3C2
RAD23A
JMJD7-PLA2G4B
JMJD7
ABTB1
RHOB
RPS2
NDUFB10
TLCD1
NEK8
ZNF581
ZNF580
H3C13
H2BC18
PSMD1
ACTR10
CDC73
GGA2
COX7A2L
STUB1
JMJD8
PRKAG1
POLR2J3
SLC38A2
HES7
ALOXE3
GCN1
COMMD1
CCT4
STAM
DDAH2
PFDN5
MYG1
H2AC4
RNASEK
C17orf49
TUBB
GPAA1
EXOSC4
GADD45B
CXorf38
STX10
IER2
TSNAX
SEC61B
ALG2
SCAMP3
IFITM2
IER5L
PCBP1
SIRT7
ADM
SLC39A7
RXRB
HSD17B8
ARHGAP4
PRKRIP1
DPH7
KMT5B
NADSYN1
DHCR7
SART3
RPS23
ISCU
ATP6AP1L
ARHGDIA
RING1
PI4KB
TMEM107
RABGGTB
IDI1
C12orf57
DHRS11
MRPL40
HIRA
TMSB4X
SKP1
GPN2
RPL13
RABL6
PYGO2
LOC101928120
ZNF653
PDE4A
FAM228B
SRSF11
ZBTB45
USP1
PES1
SF3B6
SGSM3
CDK11A
IQCG
NDUFA4
UCKL1
EPN2
DAPK3
PTGES2
TBK1
POMZP3
MRPL53
HMCES
ZRANB2
TRIM8
FAM174C
CCDC34
FLOT2
SNAP47
E2F3
H4C7
H3C7
H2BC9
FARSB
MAD1L1
ATP5MG
CIRBP
GRAMD2A
TMEM230
NOP53
TMEM132A
TIMM13
DONSON
KMT2A
SH3BGRL3
ZFP36L1
GET4
EIF4ENIF1
RPL21
ZNF446
MMP24OS
MMP24-AS1-EDEM2
H2BC7
FUT11
TAF9
RAD17
AK6
MID1IP1
TM9SF1
TUSC2
MOV10
CCDC107
ADK
NDST2
PSMG1
MAPK8IP3
C5orf24
SELENOF
HS2ST1
H3C12
H2BC17
H2AC17
H4C5
RPS27A
CLHC1
MAML1
OAZ1
SSC5D
NAT14
MT2A
TOM1
H3C4
H2AC7
CCDC24
COX18
BRWD1
VPS9D1
PNO1
PFN1
GTF2A2
PIN4
WDR90
IKBKG
G6PD
SIX5
HMGN2
EIF2S3
TMSB10
GAPDH
FTL
NOLC1
NANOS1
H3C1
H1-1
GPANK1
C6orf47
SLC25A10
STAG1
NFKBIL1
DDX39B
ATP6V1G2
MRPL24
ID1
PDHX
APIP
H2BC8
H2AC8
CAPNS1
ACP4
AXDND1
RPS28
NDUFA7
DYRK1B
TRIM37
BAZ2A
RPL13A
NECAB3
H2BC15
H2AC15
RGL2
RPS29
ZFX
CYRIB
KIF2C
LRRC24
IGF2BP3
CDH24
C8orf82
SPATC1L
ZNF48
WBP1
INO80B
SCFD1
FIBP
CCDC85B
ARHGAP39
NPM3
FGF8
VWA7
RNF167
NXF1
TNFRSF12A
THOC6
HCFC1R1
CDK16
GANAB
H3C10
H2BC13
H2AC13
PNMA1
VARS2
GMPPB
AMIGO3
MDP1
CHMP4A
EXOSC6
TAF10
SEC31A
SLC25A11
PHLDA1
PDCD2L
BAG6
PCBD2
ZNF513
RCOR3
CCDC138
GADD45GIP1
CISD3
TMED1
FBF1
UBC
MAN2C1
PIP4K2B
DRAP1
C11orf68
XRN1
PCBP4
SURF6
H4C8
ENO3
ANAPC7
WDR6
CD320
SELENOH
CSKMT
C11orf98
LDHC
POLD1
SPOUT1
GOLGA5
RPL10
NKIRAS1
CEBPB
TBCK
RCE1
AIMP1
KLHL11
UBTF
NOP14
GRK4
GSTO2
TSC22D1
SP3
TUBB4B
MT1M
MT1E
LLGL2
FADS2
FADS1
HDAC10
RPS15A
SNX14
BAG2
MRPL38
EIF1
RXYLT1
TYSND1
MRPL28
ECI1
SLC50A1
DPM3
H3-3B
SNAPC4
MRTO4
EMC1
PIP5KL1
NME3
MRPS34
EME2
IMPDH2
SMC2
TEDC2
CD79A
SPHK2
TMEM223
TMEM179B
STYX
TTC33
LAMP1
INPP5K
HAX1
RPL18
FAM83E
UPF3A
FDX2
HPDL
C7orf26
CELF1
PRAF2
ELK1
YJU2
TYMP
SCO2
FAM166A
ORAI3
RNF151
RHOT2
H3-3A
WDR97
MAF1
MLLT6
WDR38
ARL6IP4
MST1
TTC8
GLRX2
GATD3B
GATD3A
CDKN1C
MLX
NDUFS3
MATR3
KBTBD4
FNBP1
ROPN1L
TOB2
LMNB1
NAPRT
SRSF4
P2RY11
UQCC3
MTA2
LBHD1
DPH6
RBM4
ANTKMT
HMBS
ARID5B
GPS2
GTF2IRD2B
DUSP2
ASTL
SCARF1
RILP
THOC5
OR6B2
NDUFA10
LARP1
USP21
IGF1R
CTNNAL1
DYNLL1
CCDC106
COASY
GTF3C4
DDX31
ARF3
SLC39A1
CRTC2
SNX9
ZNF35
PIM2
IRF2BP2
FAM104A
C17orf80
BICRA
RPL35A
GAS2L1
SRRT
VPS4A
RABGAP1
CITED4
PABPN1
SAR1A
FAM89B
EHBP1L1
RAB40C
ICA1L
CSNK2B
CCDC78
ANAPC4
UBB
KIF27
ZBTB12
EHMT2
C2
TTYH2
ABCB6
ATXN2
RBKS
BABAM2
DENR
RPN1
AGO3
PHOX2A
NFKBIA
TAOK2
RPL15
CENPA
HNRNPA1
CBX5
TUBA1B
TIGD5
EEF1D
BCAP29
HOXA3
APOLD1
PATZ1
RPS12
CNPY2
URGCP
HSPA1B
SPEN
GMEB2
MEMO1
POLR2C
ZNF865
SFN
ZBTB22
TAPBP
FBXO4
FSTL3
RPL7
RDH10
C16orf46
DENND4B
SLC25A39
PCF11
URGCP-MRPS24
LMLN
ENAH
CNOT3
WDR24
NME4
DECR2
SLC35B2
RHBDL1
ABCF3
POM121C
CAMK2N2
SAMD1
PWP2
LOC102724159
CDK12
SRCAP
RNF225
LOC730183
SLC12A6
PRMT3
TLL2
PPFIA4
PACS1
LENG9
MYL6
ST3GAL3
USP34
CCDC97
GINS2
ATF4
PPP1R37
ADNP
ROGDI
ZNHIT2
ROMO1
NFS1
SFT2D3
HYAL2
LRRC37A3
SEC14L1
RABGEF1
H3C8
H2BC10
PROSER1
NHLRC3
CRK
H2BC14
H2AC14
NOXO1
GFER
HNRNPU
MVB12A
TMPPE
GLB1
S100A6
C19orf71
SLC25A42
AP3M1
RECQL4
PLPP5
MARCHF6
LRRC14
CELSR3
SREBF2
TIGD3
CS
SELENOO
PPP3CB
CRELD1
CSNK1G1
LRP2BP
ANKRD37
MLXIP
TCTEX1D2
ADAT1
EIF4A1
TUBGCP6
TTLL3
ASB13
TRIM52
TLCD2
ZBTB37
NOL7
C1QTNF8
CSRNP2
TXN2
PURA
SLC25A6
RSRP1
ANKLE2
PNRC1
PDF
GPX1
OTUD7B
LBR
ISL2
TBC1D13
MFSD3
ZNRD2
NPDC1
ENTPD2
PHIP
CEBPA
PAF1
CENPVL3
TRIM45
ATXN7L2
STMP1
SF3B3
COG4
C7orf25
IFRD2
MTMR10
DPY19L4
IRF2BP1
NUDT17
NAXE
RPL6
WDR74
GPR137
MYOZ3
EIF2D
MORC3
FBXO31
DNAJC21
UFM1
NPRL3
CLN8
C8orf37
TRMU
ACTN4
ZNF398
TARBP2
MAP3K12
CCDC130
WDR27
C6orf120
ZNF341
RPLP2
LONP1
CATSPERD
SETD5
RPL35
MAP1LC3B
LRR1
MRPL12
METTL8
DCAF17
SNX5
MGME1
NUDT16L1
SETD6
TARS3
KLF9
SOD2
APTX
ZBTB2
CEMP1
FAU
YY1
POLB
XPNPEP3
ST13
DNAJB7
CMTR1
ZNF584
RASA4B
PPARA
MADD
CUL9
ANKRD12
DLG4
ACADVL
POLDIP3
TP53BP2
RICTOR
TRIM3
IAH1
OVCA2
SLC25A17
MIF4GD
NOL3
HAGHL
SFXN4
COMT
H1-10
STRIP1
NUMBL
GADD45A
CDK9
IRX3
TLE3
SRA1
RUVBL1
CTNNB1
DGKZ
CHD5
C17orf75
HYI
ZCWPW1
MEPCE
VEGFB
DNAJC4
JPT2
HYAL1
SIGMAR1
CLK3
MCCD1
EGLN1
KLF12
DERA
HNRNPF
HMGA1
YAP1
TFPT
PRPF31
PIDD1
TFAP4
MRM1
GNE
THEM4
TXLNA
MTF2
BMI1
ID2
BORCS6
BASP1
ADAMTS10
MROH6
DCAKD
KLF6
SRSF2
GBA
DNAJB4
RNF166
CTU2
PHF10
ALKBH5
ACVR2B
TBR1
FIGN
POMT1
MORF4L1
ACTRT3
ADARB1
ISY1-RAB43
ISY1
SMIM29
RRM2
TNS2
ZNF703
COA6
TSFM
DPH2
B4GALT2
ATP6V0B
ASXL1
GABARAP
CEP192
TRIM65
TMEM267
TUT1
NFAT5
CCAR2
RFX1
ZNF76
ATXN2L
PHLDA2
KAT6A
ATAD2
ANKH
ANKRD54
NDUFB2
ARID3C
N4BP2
NDUFS7
MAN1B1
RAB26
ILF3
PTPN6
CYC1
TRPT1
NUDT22
CACFD1
LUC7L2
UFSP1
ACHE
RAB23
RPL37
PRKDC
MCM4
CHAF1B
TXNRD2
SMG5
PRRC2B
NOTCH2NLA
KLC2
IDH3B
JADE2
QSER1
DESI2
TM2D3
TRAP1
ZMIZ2
PMF1-BGLAP
PMF1