ChIP-Atlas: Target genes

Potential target genes for CPSF3

Query protein: CPSF3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5441334 | HeLa
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
CPSF3's Target genes

◢ CPSF3: Average

◢ SRX8018228: 293

◢ SRX8018229: 293

◢ SRX8018230: 293

◢ SRX8018231: 293

◢ SRX10448664: HeLa

◢ SRX10448665: HeLa

◢ SRX10448666: HeLa

◢ SRX10448667: HeLa

◢ SRX5441330: HeLa

◢ SRX5441331: HeLa

◣ SRX5441334: HeLa

◢ SRX5441335: HeLa

◢ SRX9237243: K-562

◢ SRX9237244: K-562

◢ SRX9237245: K-562

◢ SRX9237246: K-562

◢ SRX8945051: U2OS

◢ SRX8945057: U2OS

◢ CPSF3: STRING

ZNF335
RABL2A
MAPKAPK5
PPARA
SRD5A1
NVL
RWDD1
RABL2B
TSN
ICE1
MRPS7
GGA3
DYNC1LI2
TAOK3
SUDS3
NUP85
NCLN
ASB13
H4C15
H4C14
VTI1B
CAPRIN1
MTRNR2L8
REXO1
H3C15
H3C14
H2AC19
H2AC18
CACTIN
H4C12
C19orf48
PSMD12
RBBP5
IPO13
GCN1
OAZ3
MRPL9
ZC3H10
RPL41
VDAC2
RIT1
VEZF1
UPF2
SEC61B
ALG2
FAM187A
EFTUD2
CCDC103
EXOSC5
BCKDHA
POLR3F
DZANK1
SNAPC5
VARS1
NME6
HSPA9
NDUFA4
SKP1
MRPL24
PI4KB
EDC4
COX7A2L
LYRM4
FARS2
PES1
H1-2
H4C3
H1-6
EPN1
HADHB
HADHA
POLG2
ZRANB2
UBE2I
H2BC5
H1-4
C6orf226
SLC35B1
GRAMD2A
BLCAP
CDK12
H4C11
NFKBIL1
DDX39B
ATP6V1G2
ZNF576
IRGQ
SECISBP2
AXDND1
RPS11
SUCLG1
TLCD1
NEK8
ACTR10
MAMDC2
COX20
AMDHD2
PSMD1
MRPS5
POLR2E
UCKL1
STAM
USP1
DCTN1
NAT10
ATP5F1E
CDC73
SUMF2
RCC1
APOM
COMMD1
CCT4
BAG6
GOSR2
EIF4ENIF1
TTC8
MPDU1
LOC100996842
CD68
NRAS
MAD1L1
DHRS11
B3GALT4
MTRNR2L1
H2BC4
H2AC6
MTRNR2L2
MSH3
DHFR
DDIT4
WDR90
PSMG2
CEP76
TSNAX
CUL7
AKAP8
ANAPC7
SUPV3L1
RPL17-C18orf32
RPL17
C18orf32
BICRA
PAK1IP1
C6orf52
PCBP1
PAXBP1
INPP5E
RABGGTB
DAPK3
RPN1
NUP205
SELENOF
HS2ST1
DNAJC21
STAM2
TAF9
RAD17
AK6
SPATC1L
FAM104A
C17orf80
C19orf53
IER3
FLOT1
PDAP1
BUD31
HOXC4
HOXC6
HOXC8
ATAT1
BAZ2A
KRBA2
SART3
ISCU
H4C2
H3C2
H2AC4
H4C8
MSH4
FARSB
EIF2S3
TMED1
H2BC21
H2AC21
H2AC20
GPAA1
EXOSC4
RNF166
CTU2
ATP5MG
ARF3
VPS28
PROZ
FAM131A
GADD45GIP1
SLC50A1
DPM3
RPL21
TBCK
AIMP1
PNO1
RPL22L1
XRN1
FTH1
RAD23A
DNAJC9
MAZ
PRRT2
PAGR1
CCDC97
NPM3
FGF8
HAX1
TBK1
HMCES
ERCC6L2
RPS2
NDUFB10
H3C13
H2BC18
TIMM13
TUBB
FRG2
ANKFY1
C5orf15
MAML1
ECI1
RRP36
MEA1
GAPDH
DENND4B
MAPK8IP3
TM9SF1
TTC33
H4C1
H3C1
H1-1
MLX
H2AC16
H1-5
SYNRG
TUSC2
COX18
NDUFS3
KBTBD4
FBXO4
SCRIB
UBE2M
CHMP2A
JUNB
C7orf25
RHOB
SLC3A2
DPH7
TMEM132A
FRG2C
DUX4
GH1
PGK1
PHF23
DVL2
H2BC11
H2AC11
SYCE2
RPS18
H2AZ1
DNAJB14
PHF1
COL23A1
GTPBP6
VPS52
DHPS
ZNF34
RPL8
H4C9
ID3
ARFGAP2
H4-16
H2AJ
CHD2
IFITM1
NDUFAF3
DALRD3
IFITM3
H2BC12
H2AC12
HMGB1
JMJD7-PLA2G4B
JMJD7
ABTB1
CCDC200
ZNF581
ZNF580
GGA2
STUB1
JMJD8
PRKAG1
POLR2J3
SLC38A2
HES7
ALOXE3
DDAH2
PFDN5
MYG1
RNASEK
C17orf49
GADD45B
CXorf38
STX10
IER2
SCAMP3
IFITM2
IER5L
SIRT7
ADM
SLC39A7
RXRB
HSD17B8
ARHGAP4
PRKRIP1
KMT5B
NADSYN1
DHCR7
RPS23
ATP6AP1L
ARHGDIA
RING1
TMEM107
IDI1
C12orf57
MRPL40
HIRA
TMSB4X
GPN2
RPL13
RABL6
PYGO2
LOC101928120
ZNF653
PDE4A
FAM228B
SRSF11
ZBTB45
SF3B6
SGSM3
CDK11A
IQCG
EPN2
PTGES2
POMZP3
MRPL53
TRIM8
FAM174C
CCDC34
FLOT2
SNAP47
E2F3
H4C7
H3C7
H2BC9
UGT1A3
CIRBP
TMEM230
NOP53
DONSON
KMT2A
SH3BGRL3
ZFP36L1
H2AX
GET4
ZNF446
MMP24OS
MMP24-AS1-EDEM2
H2BC7
FUT11
MID1IP1
MOV10
CCDC107
ADK
NDST2
PSMG1
C5orf24
H3C12
H2BC17
H2AC17
H4C5
RPS27A
CLHC1
OAZ1
SSC5D
NAT14
MT2A
TOM1
H3C4
H2AC7
CCDC24
BRWD1
VPS9D1
PFN1
GTF2A2
PIN4
IKBKG
G6PD
SIX5
HMGN2
TMSB10
FTL
NOLC1
NANOS1
GPANK1
C6orf47
SLC25A10
STAG1
ID1
PDHX
APIP
H2BC8
H2AC8
CAPNS1
ACP4
RPS28
NDUFA7
DYRK1B
TRIM37
RPL13A
NECAB3
H2BC15
H2AC15
RGL2
RPS29
ZFX
CYRIB
KIF2C
LRRC24
IGF2BP3
CDH24
C8orf82
ZNF48
WBP1
INO80B
SCFD1
FIBP
CCDC85B
ARHGAP39
VWA7
RNF167
NXF1
TNFRSF12A
THOC6
HCFC1R1
CDK16
GANAB
H3C10
H2BC13
H2AC13
PNMA1
VARS2
GMPPB
AMIGO3
MDP1
CHMP4A
EXOSC6
TAF10
SEC31A
SLC25A11
PHLDA1
PDCD2L
PCBD2
ZNF513
CRYAA2
CRYAA
RCOR3
CCDC138
CISD3
FBF1
UBC
MAN2C1
PIP4K2B
DRAP1
C11orf68
PCBP4
SURF6
ENO3
WDR6
CD320
SELENOH
CSKMT
C11orf98
LDHC
POLD1
SPOUT1
GOLGA5
RPL10
NKIRAS1
CEBPB
RCE1
KLHL11
UBTF
NOP14
GRK4
GSTO2
TSC22D1
SP3
TUBB4B
MT1M
MT1E
LLGL2
FADS2
FADS1
HDAC10
RPS15A
SNX14
BAG2
MRPL38
EIF1
RXYLT1
TYSND1
MRPL28
H3-3B
SNAPC4
MRTO4
EMC1
PIP5KL1
NME3
MRPS34
EME2
IMPDH2
SMC2
TEDC2
CD79A
SPHK2
TMEM223
TMEM179B
STYX
LAMP1
INPP5K
RPL18
FAM83E
UPF3A
FDX2
HPDL
C7orf26
CELF1
PRAF2
ELK1
YJU2
TYMP
SCO2
FAM166A
ORAI3
RNF151
RHOT2
H3-3A
WDR97
MAF1
MLLT6
WDR38
ARL6IP4
MST1
GLRX2
GATD3B
GATD3A
CDKN1C
MATR3
FNBP1
ROPN1L
TOB2
LMNB1
NAPRT
SRSF4
P2RY11
UQCC3
MTA2
LBHD1
DPH6
RBM4
ANTKMT
HMBS
ARID5B
GPS2
GTF2IRD2B
DUSP2
ASTL
SCARF1
RILP
THOC5
OR6B2
NDUFA10
LARP1
USP21
IGF1R
CTNNAL1
DYNLL1
CCDC106
COASY
GTF3C4
DDX31
SLC39A1
CRTC2
SNX9
ZNF35
PIM2
IRF2BP2
RPL35A
GAS2L1
SRRT
VPS4A
RABGAP1
CITED4
PABPN1
SAR1A
FAM89B
EHBP1L1
RAB40C
ICA1L
CSNK2B
CCDC78
ANAPC4
UBB
KIF27
ZBTB12
EHMT2
C2
TTYH2
ABCB6
ATXN2
RBKS
BABAM2
DENR
AGO3
TSC1
GFI1B
PHOX2A
NFKBIA
TAOK2
RPL15
CENPA
HNRNPA1
CBX5
TUBA1B
TIGD5
EEF1D
BCAP29
HOXA3
APOLD1
PATZ1
CALM2
RPS12
CNPY2
URGCP
HSPA1B
SPEN
GMEB2
MEMO1
POLR2C
OPRL1
LKAAEAR1
ZNF865
SFN
ZBTB22
TAPBP
FSTL3
RPL7
RDH10
GAGE2C
GAGE2B
GAGE2A
C16orf46
SLC25A39
PCF11
URGCP-MRPS24
LMLN
ENAH
CNOT3
GAGE7
GAGE6
GAGE5
GAGE4
GAGE12I
GAGE12F
GAGE12B
WDR24
NME4
DECR2
SLC35B2
RHBDL1
ABCF3
POM121C
LRP6
CAMK2N2
SAMD1
PWP2
LOC102724159
LRRC6
SRCAP
RNF225
LOC730183
TXNIP
SLC12A6
PRMT3
TLL2
PPFIA4
PACS1
LENG9
H2BU1
H2AW
MYL6
ST3GAL3
USP34
GINS2
ATF4
PPP1R37
ADNP
ROGDI
ZNHIT2
ROMO1
NFS1
SFT2D3
HYAL2
LRRC37A3
SEC14L1
RABGEF1
H3C8
H2BC10
PROSER1
NHLRC3
CRK
H2BC14
H2AC14
NOXO1
GFER
HNRNPU
MVB12A
TMPPE
GLB1
S100A6
C19orf71
SLC25A42
AP3M1
RECQL4
PLPP5
MARCHF6
LRRC14
CELSR3
SREBF2
TIGD3
CS
SELENOO
PPP3CB
CRELD1
CSNK1G1
LRP2BP
ANKRD37
MLXIP
TCTEX1D2
ADAT1
EIF4A1
TUBGCP6
TTLL3
TRIM52
TLCD2
ZBTB37
NOL7
C1QTNF8
CSRNP2
TXN2
PURA
SLC25A6
RSRP1
ANKLE2
PNRC1
PDF
GPX1
OTUD7B
LBR
ISL2
TBC1D13
MFSD3
DCDC2
ZNRD2
NPDC1
ENTPD2
PHIP
CEBPA
PAF1
CENPVL3
TRIM45
ATXN7L2
STMP1
SF3B3
COG4
IFRD2
MTMR10
DPY19L4
IRF2BP1
NUDT17
NAXE
RPL6
WDR74
GPR137
MYOZ3
EIF2D
MORC3
FBXO31
UFM1
NPRL3
CLN8
C8orf37
TRMU
ACTN4
ZNF398
TARBP2
MAP3K12
CCDC130
WDR27
C6orf120
ZNF341
RPLP2
LONP1
CATSPERD
SETD5
RPL35
MAP1LC3B
LRR1
MRPL12
METTL8
DCAF17
SNX5
MGME1
NUDT16L1
SETD6
TARS3
KLF9
SOD2
APTX
ZBTB2
CEMP1
FAU
YY1
POLB
XPNPEP3
ST13
DNAJB7
CMTR1
ZNF584
RASA4B
MADD
CUL9
ANKRD12
DLG4
ACADVL
POLDIP3
TP53BP2
RICTOR
TRIM3
IAH1
OVCA2
SLC25A17
MIF4GD
NOL3
HAGHL
SFXN4
COMT
H1-10
STRIP1
NUMBL
GADD45A
CDK9
IRX3
TLE3
SRA1
RUVBL1
CTNNB1
DGKZ
CHD5
C17orf75
HYI
ZCWPW1
MEPCE
VEGFB
DNAJC4
JPT2
HYAL1
SIGMAR1
CLK3
MCCD1
EGLN1
KLF12
DERA
HNRNPF
HMGA1
YAP1
TFPT
PRPF31
PIDD1
TFAP4
USP17L22
USP17L20
MRM1
GNE
THEM4
TXLNA
MTF2
BMI1
ID2
BORCS6
BASP1
ADAMTS10
MROH6
DCAKD
KLF6
SRSF2
GBA
KMT2D
DNAJB4
PHF10
ALKBH5
ACVR2B
TBR1
FIGN
POMT1
MORF4L1
ACTRT3
ADARB1
ISY1-RAB43
ISY1
SMIM29
USP17L5
USP17L30
USP17L29
USP17L28
USP17L27
USP17L26
USP17L25
USP17L24
RRM2
TNS2
ZNF703
COA6
TSFM
DPH2
B4GALT2
ATP6V0B
ASXL1
GABARAP
CEP192
TRIM65
TMEM267
TUT1
NFAT5
CCAR2
RFX1
ZNF76
ATXN2L
PHLDA2
KAT6A
ATAD2
ANKH
ANKRD54
NDUFB2
ARID3C
N4BP2
NDUFS7
MAN1B1
RAB26
ILF3
PTPN6
CYC1
TRPT1
NUDT22
CACFD1
LUC7L2
UFSP1
ACHE
RAB23
RPL37
PRKDC
MCM4
CHAF1B
TXNRD2
SMG5
PRRC2B
NOTCH2NLA
KLC2
IDH3B
JADE2
QSER1
DESI2
TM2D3
TRAP1
ZMIZ2
PMF1-BGLAP
PMF1
DIDO1
FAM199X
ZNF696
HOXA5
SHOX2
RUFY2
RSRC1