ChIP-Atlas: Target genes

Potential target genes for CPSF3

Query protein: CPSF3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10448667 | HeLa
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
CPSF3's Target genes

◢ CPSF3: Average

◢ SRX8018228: 293

◢ SRX8018229: 293

◢ SRX8018230: 293

◢ SRX8018231: 293

◢ SRX10448664: HeLa

◢ SRX10448665: HeLa

◢ SRX10448666: HeLa

◣ SRX10448667: HeLa

◢ SRX5441330: HeLa

◢ SRX5441331: HeLa

◢ SRX5441334: HeLa

◢ SRX5441335: HeLa

◢ SRX9237243: K-562

◢ SRX9237244: K-562

◢ SRX9237245: K-562

◢ SRX9237246: K-562

◢ SRX8945051: U2OS

◢ SRX8945057: U2OS

◢ CPSF3: STRING

PGK1
C6orf226
SYCE2
DHPS
PHF23
DVL2
ATAT1
ZC3H10
RPL41
C19orf53
KRBA2
EPN2
PHF1
H2BC4
H2AC6
H4C3
H1-6
EDC4
RPL17-C18orf32
RPL17
C18orf32
DDAH2
NRAS
JMJD7-PLA2G4B
JMJD7
UBE2M
CHMP2A
DNAJC9
H4C12
SYNRG
VPS28
TMEM107
ZFP36L1
H4C11
B3GALT4
H2BC11
H2AC11
RPS18
VPS52
H4C9
SCRIB
SUMF2
NADSYN1
DHCR7
RPL22L1
FAM131A
GPN2
H4-16
H2AJ
CUL7
COX20
NDUFAF3
DALRD3
MAZ
MRPL53
GADD45B
NAT10
ARFGAP2
IFITM1
IFITM3
PDE4A
ADM
ID3
CXorf38
H4C7
H3C7
H2BC9
RHOB
IER5L
CHD2
FAM228B
SF3B6
C12orf57
JUNB
MPDU1
LOC100996842
CD68
SNAPC5
VTI1B
AMDHD2
FIBP
CCDC85B
IKBKG
G6PD
SLC38A2
VEZF1
GGA2
SLC39A7
RXRB
HSD17B8
RING1
SCAMP3
STAG1
TUSC2
HYAL2
IFITM2
CCDC107
H4C2
H4C1
H3C2
POLG2
ABTB1
H2BC12
H2AC12
PFDN5
MYG1
HES7
ALOXE3
SSC5D
NAT14
H2AZ1
DNAJB14
RIT1
H2BC5
H1-4
MSH4
ISL2
E2F3
ZNF653
INPP5E
H1-2
PRKRIP1
GTF2A2
STX10
IER2
SAR1A
RPS2
NDUFB10
RNF151
CAPNS1
FRG2C
AKAP8
TNFRSF12A
THOC6
HCFC1R1
PRKAG1
KIF2C
MT2A
ZNF34
RPL8
MID1IP1
CDK11A
MRPL40
HIRA
MT1M
MT1E
APOM
GPANK1
C6orf47
CSNK2B
TUBB
CITED4
NOP53
DYNLL1
H2BC21
H2AC21
H2AC20
RAD23A
HPDL
TMSB4X
FLOT2
H2BC8
H2AC8
MTA2
IGF2BP3
TRIM8
SIRT7
RRP36
MEA1
ARHGDIA
PRAF2
ZNF581
ZNF580
SECISBP2
ZNF446
CYRIB
DDIT4
HNRNPA1
CBX5
SH3BGRL3
ARHGAP4
PRRT2
PAGR1
H2AX
HMBS
ARID5B
VARS2
HMCES
GTPBP6
H3C15
H3C14
H2AC19
H2AC18
FUT11
SCFD1
WBP1
INO80B
FTL
RPL13
FTH1
MOV10
TRIM37
SPOUT1
SLC3A2
CDK16
H3C13
H2BC18
CCDC24
RPS28
NDUFA7
CDH24
EPN1
TMSB10
IER3
FLOT1
TUBB4B
FAM166A
TBK1
CSKMT
C11orf98
UQCC3
LBHD1
POMZP3
CCDC34
CDKN1C
MDP1
CHMP4A
POLD1
FADS2
FADS1
LDHC
H2BC15
H2AC15
MTRNR2L1
RPS23
ATP6AP1L
SLC25A39
ID1
GMPPB
AMIGO3
CD320
DONSON
PSMG1
MST1
KMT5B
ELK1
RAB40C
SPEN
PATZ1
UCKL1
GINS2
TLL2
CIRBP
IRF2BP2
TCTEX1D2
RPS11
H2AC4
RPL13A
ANKH
TEDC2
TRMT112
PRDX5
ATF4
H4C5
NXF1
PDCD2L
TLCD2
PCF11
IRF2BP1
ZNF48
PIM2
VWA7
RPS15A
UBTF
SORBS2
GANAB
HMGN2
WDR6
C5orf24
PHLDA1
SFN
H2BC7
TOM1
H3C4
H2AC7
NOLC1
ACTRT3
MYNN
SNX14
LMNB1
SNAP47
KLHL11
CD79A
GMEB2
FAM89B
EHBP1L1
ZNRD2
INPP5K
GATD3B
GATD3A
PYGO2
LOC101928120
S100A6
MAD1L1
GPAA1
EXOSC4
SGSM3
PHOX2A
MATR3
ZBTB45
NPM3
FGF8
IGF1R
RCC1
ING1
STYX
CAMK2N2
METTL8
DCAF17
SRSF11
TOB2
H3C12
H2BC17
H2AC17
WDR90
ZFX
RNASEK
C17orf49
RPL10
PFN1
ARHGAP39
RNF167
SLC25A11
ENO3
DUSP2
ASTL
NDST2
IQCG
LMLN
JADE2
C8orf37
RGL2
UBB
LLGL2
MTIF3
SP3
GSTO2
BORCS6
LARP1
HMGA1
RPL35
ARPC5L
H1-10
POLR3D
UBC
PHF8
EIF1
GAS2L1
HAX1
SFT2D3
SNAPC4
PNRC1
DUSP5
MAPK8IP3
COX18
SIX5
GAPDH
ANAPC4
GINS3
WBP1L
VEGFB
DNAJC4
DNAJB4
TRPT1
NUDT22
H3C1
H1-1
PCBP1
DHRS11
RBM4
TTLL3
ILF3
GET4
CEBPB
ICA1L
STUB1
JMJD8
BAZ2A
RHBDL1
KRT10
TIMM13
DPH7
JUN
ARL6IP4
RPS29
NAPRT
PWP2
LOC102724159
MROH6
TRIM25
TEX45
TYMP
SCO2
FRG2
TRIM45
GRAMD2A
FBF1
GTF2A1
DAPK3
FSTL3
MLLT6
IDH3B
TIMMDC1
MVB12A
ACVR2B
SPHK2
RPL18
FAM83E
PHLDA2
TYSND1
TMEM132A
BAG2
SMG9
TLE3
PRKDC
MCM4
FDX2
HDAC10
SCARF1
RILP
TIGD5
EEF1D
DUX4
USP34
H3-3B
TBR1
CHD5
FIGN
TSC22D1
MAN1B1
DYRK1B
MTMR10
NKIRAS1
RPL15
ZCCHC14
SELENOH
ABCB6
IFRD2
REEP4
IMPDH2
ADK
TRADD
HSF4
FBXL8
MAML1
APOLD1
PIP5KL1
WDR97
MAF1
WDR24
WDR38
H3C10
H2BC13
H2AC13
ABCF3
ROPN1L
TUBGCP6
IRX3
PNMA1
ETV6
NPRL3
ARF3
C19orf71
CEBPA
NOL3
SGF29
DRAP1
C11orf68
XRN1
ATP5F1E
PPP1R37
RAB23
CCDC138
FAM161A
CISD3
PRPF38B
ACTN4
UBE2C
SLC39A1
CRTC2
C16orf46
CDC6
TMEM230
PTAR1
TBC1D22A
PXDN
CCNT1
ZFP36
CXCR5
PLEKHG2
PRMT3
LRP2BP
ANKRD37
ANKRD12
EFCAB13
SRRT
TMEM223
TMEM179B
POM121C
RPLP2
PIDD1
COA6
SHOX2
RSRC1
SREBF2
TNS2
SELENOI
ADGRF3
MYC
PCBP4
RABGEF1
PMM1
PHF10
KLF6
H4C8
LENG9
SLC25A28
CEBPD
LRRC24
C8orf82
LONP1
CATSPERD
DPH2
B4GALT2
ATP6V0B
SIGMAR1
ARID3C
ARID1B
SLC50A1
DPM3
SEMA4C
TCIM
NANOS1
EXOSC6
MCCD1
RANGRF
ZNF513
THOC5
GCN1
TTC33
RPLP0
SURF6
ANTKMT
CCDC78
METRN
CALM2
MYL6
GPR137
BAD
NARF
SLC25A10
QSER1
CENPA
PANK1
CS
APTX
CAVIN3
LAMP1
RHOT2
DCAKD
CCND1
LRP8
NME6
RPL27A
ORAI3
YWHAH
DPP3
H4C15
H4C14
YAP1
CRK
MARCHF6
ACACB
H3C8
H2BC10
N4BP2
SERINC4
HYPK
MMP24OS
MMP24-AS1-EDEM2
ZNF35
TUBA1B
TFPT
PRPF31
RAB1B
FNBP1
POP5
PHF14
TAF4
MRPL28
TAF2
ZNF782
OAZ1
TAF10
NME3
MRPS34
EME2
KATNBL1
SLC30A7
EXTL2
P2RY11
STXBP2
PCP2
EIF3G
CELF1
SRSF4
C1orf56
CSNK1G1
ROMO1
NFS1
RPL19
MTFR2
GDF15
SNX5
MGME1
FOS
LEPROTL1
VPS9D1
ZNF451
PBLD
HNRNPH3
LRPPRC
ZBTB22
TAPBP
PAIP2
CLN8
CEP192
POLR2H
CLCN2
RRAGC
CCN1
TAOK2
SLC25A6
SIPA1
CHEK1
FANCC
HDAC7
AQP11
PMS1
ORMDL1
MLX
COASY
ADAT1
MICAL3
FERMT1
RCC2
ACP4
MAN2C1
TPCN1
IQCD
PCMTD2
GRIN3B
ZDHHC5
SLC35B2
TRIM52
MPHOSPH8
TRIM3
IL10RB
NCOA5
SPAG9
FBXO31
MAP1LC3B
MNT
ZNF143
C1QBP
TFAM
PYROXD1
ISY1-RAB43
ISY1
TUT1
PTMS
LAG3
PCBD2
ZBTB12
EHMT2
C2
SMTN
SLC35A2
COX8A
MLXIP
BASP1
ZNF696
OVCA2
SLURP1
SRCAP
LOC730183
MRM1
GAMT
MYLPF
SEPTIN1
RSRP1
GADD45A
C17orf98
RRS1
ADHFE1
SRL
EIF4A1
ABHD16B
TTYH2
THAP7
EID1
SEC14L1
HYKK
NFKBIA
RPS27A
CLHC1
PDF
JOSD2
ASPDH
TLCD1
NEK8
RABL6
CCDC106
RPL23A
FOSB
PAXX
CLIC3
URB1
CSGALNACT1
C7orf26
NUDT17
SETD5
RPUSD1
CHTF18
CFD
ATXN2L
IL34
ARF6
GLE1
TYW1
SBDS
NDUFS3
KBTBD4
KLC2
JUND
VAV2
IQCN
MRPL12
MADD
XBP1
RPL37
SETD1B
RNF115
POLR3C
CARD6
CCM2
UBL4A
LAGE3
FAM156B
FAM156A
ZIC2
TBXA2R
GABARAPL1
RNF223
ARID2
MAP3K1
DNAJC21
TMEM243
SEC14L2
SPRY1
USP8
DPY30
TNFSF13
SENP3
PNPLA6
NME4
DECR2
NCOA2
UNC13D
AJM1
BCL6
MIF4GD
ARID1A
CDK13
PABPN1
URGCP
URGCP-MRPS24
SMIM29
FAM117B
KLF3
PHIP
USP21
BCAR3
HUWE1
PTPN6
ZSCAN16
CCDC130
PTP4A1
MYOZ3
CDKN2A
BICD2
RASD1
ELOVL1
BRD3
CDC20
LRRC73
MRAS
ATXN2
SLC12A6
CELSR3
SLC6A9
NOP10
CPT1A
RETREG1
TOPORS
SMIM27
CACNB3
CYB561D1
LPCAT3
RPRML
GABARAP
NPDC1
ENTPD2
ARMC7
YIF1A
TMEM151A
C7orf25
YY1
TCIRG1
TMEM250
NTN3
TBC1D24
ECI1
SELENOO
INTS1
BRWD1
SPTAN1
NAA35
SRGAP2C
FAM72B
RARS1
BMI1
CCAR2
C8orf58
CTNNAL1
LBR
IL17C
TSFM
ACOX3
KMT2A
SRSF2
MFSD11
MRI1
ZBTB2
CACFD1
USP22
LRFN4
FNTA
RPL6
STXBP3
ST3GAL1
SAMD1
C19orf67
HSPB1
ENTPD8
CXCR4
SERF2
ELL3
CRELD1
TP53BP2
ADAMTS10
VGF
SLU7
PTTG1
IAH1
MROH1
MYO1G
SLC25A5
MRPL24
SLC5A3
MRPS6
HYAL1
NAA80
HYAL3
RUNX1
COMTD1
CCDC97
DMPK
PAK2
SF1
ABCA7
PNRC2
SLC35E2B
GAS1
ZBTB10
PACS1
ZNF703
COQ7
CSRNP2
PURA
PRKACB
G3BP2
DERA
PPP4R3B
PLEKHN1
CLASRP
DHX58
KLF9
COQ3
PLPP5
POLB
NOP2
SSH2
EFCAB5
SIAH2
E2F5
TXN2
SGK1
TUBD1
RPS6KB1
DAXX
PXDC1
GATAD1
PSEN1
DDX3X
POLR2G
MYL12A
HAGHL
DUSP1
NSD2
STK19
DXO
RUNX2
ARHGEF17
KMT2E
NEIL1
TMF1
WDR74
SRA1
AGBL2
PGGT1B
PITX3
GBF1
IVD
USF2
PRR12
ZNF25
HSPA1L
HSPA1A
KAZALD1
PSRC1
SOD2
PKM
PDCD4
ACAT2
GTF3C4
DDX31
RABGAP1
FOXO3
H2AB3
H2AB2
H2AB1
F8A3
F8A2
F8A1
SWSAP1
RCE1
RASA4B
ZFP64
SPATA2L
ATP5IF1
GPS2
WDR27
C6orf120
RPLP1
NDUFA2
IK
PHF21A
TOE1
MUTYH
ARID3A
KISS1R
RNF225
H2BC14
H2AC14
SSH3
FAM53B
FAM168B
SPRYD3
HOXA3
HOXA5
HOXA6
PNKP
ETV4
C8G
FBXW5
KAT8
ELOVL6
PIK3CA
ROGDI