ChIP-Atlas: Target genes

Potential target genes for CPSF3

Query protein: CPSF3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX8018230 | 293
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
CPSF3's Target genes

◢ CPSF3: Average

◢ SRX8018228: 293

◢ SRX8018229: 293

◣ SRX8018230: 293

◢ SRX8018231: 293

◢ SRX10448664: HeLa

◢ SRX10448665: HeLa

◢ SRX10448666: HeLa

◢ SRX10448667: HeLa

◢ SRX5441330: HeLa

◢ SRX5441331: HeLa

◢ SRX5441334: HeLa

◢ SRX5441335: HeLa

◢ SRX9237243: K-562

◢ SRX9237244: K-562

◢ SRX9237245: K-562

◢ SRX9237246: K-562

◢ SRX8945051: U2OS

◢ SRX8945057: U2OS

◢ CPSF3: STRING

H3C15
H3C14
H2AC19
H2AC18
POLR2J3
H2AZ1
DNAJB14
COL23A1
FAM174C
H4C15
H4C14
KMT2A
ENAH
MORC3
B3GALT4
RPS18
VPS52
TLCD1
NEK8
H2BC21
H2AC21
H2AC20
IDI1
H3-3A
RRP36
MEA1
FRG2C
ZC3H10
RPL41
GH1
H2BC5
H1-4
SCRIB
MORF4L1
AMDHD2
RCOR3
VEZF1
ZNF34
RPL8
H4C2
H3C2
H2AC4
H2BC11
H2AC11
KLF12
EGLN1
C6orf226
COX20
SECISBP2
CTNNB1
TARS3
KIF27
PPP3CB
STUB1
JMJD8
HNRNPU
VPS28
KIAA2026
PIP4K2B
PRRC2B
DESI2
H1-2
CHD2
ABL2
MMP24OS
MMP24-AS1-EDEM2
FRG2
TMEM230
PYCR2
TRAPPC8
POGZ
AKT3
HMGN1
PRSS27
RNASEK
C17orf49
NECAB3
FBXL3
LMBR1
SNAPC5
HMGN2
EPN1
ZBTB2
H4C1
H3C1
H1-1
SYNRG
H3C13
H2BC18
SRSF11
TBC1D13
H4C11
ZNF398
SETD5
RAB4A
GATAD2B
IBA57
MEMO1
AGK
DEDD
VPS9D1
TNRC18
LOC100129484
FAM118A
POLG2
PARP1
ZNF581
ZNF580
HIPK1
ZNF513
GTPBP3
ANO8
H4C3
H1-6
PPP1CC
ADARB1
NCOA7
EDC4
KMT2C
CLK3
CUL1
UBP1
PCDH9
TPTEP2-CSNK1E
EYA4
QSOX1
ATXN7L2
NOXA1
TTC5
ID2
ZFAND6
PANK3
EZH2
BRWD1
RABGAP1
NFKBIA
AKAP8
C15orf39
MAP3K21
ARHGAP35
AKT2
EIF2D
ZBTB20
YBX1
DNAJC9
HNRNPF
RRNAD1
ISG20L2
DRAP1
C11orf68
RUFY2
NUDT4B
CDC42BPA
HSPG2
CTNNA1
SVBP
ERMAP
GTPBP6
BHLHA9
MAN2C1
HYI
SPIN1
SP3
HECTD1
TFAP4
ACBD3
DYRK1B
PDCD2
TAF10
B3GALNT2
CMTM7
BRAF
SP1
PHF23
DVL2
NUB1
RPL17-C18orf32
RPL17
C18orf32
FPGS
FNBP1
OTUD7B
DPY19L4
SSX2IP
H2BC12
H2AC12
VANGL2
MAP3K2
SLC25A10
NAXE
RAVER2
ZNF768
DPH7
RRM2
GDPGP1
CIB1
USP21
RASA4B
ARHGEF11
STAU1
BMI1
COMMD3-BMI1
COMMD3
FAM199X
SKIDA1
MSL3
NOTCH2NLB
CCDC88A
GPR180
CCSAP
ASH1L
NCAM2
ESR2
CUL7
UBE2D2
FBXO11
DONSON
DSG2
SMIM19
SLC20A2
NUCKS1
TRABD
SCAMP3
HIVEP1
EPHX1
MKRN1
JAK1
CIZ1
THAP11
NUTF2
CENPT
UBE2J2
ARID3B
KANSL1L
RNF11
RPEL1
ADSS2
ZMYM4
SRCAP
LOC730183
STMP1
MCL1
SPOPL
PCBD2
UBE2M
CHMP2A
NKIRAS1
TBC1D10C
PPP1CA
NR1D2
NR2C2
MAZ
PRRT2
PAGR1
CIRBP
SMYD2
DDX59
SATB1
NFAT5
ITGB3BP
EFCAB7
PHACTR2
SMARCD2
ATP11B
OPN3
CHML
ZBTB18
NOTCH1
PIN4
EFCAB2
KANSL1
LUC7L2
MSX2
CDC42EP4
WIZ
PABPN1
CECR2
KMT5B
GTF2IRD2B
ZNF341
TP53BP2
NPIPB9
PEX7
ITGB1
GALNT11
URB2
TAF5L
UBA3
ARL6IP5
ANKRD54
REV3L
ANKRD50
GPAA1
EXOSC4
REPIN1
AGO3
NCOA2
ZNF48
TSEN15
TMEM150A
PRPF40B
CBX1
USF3
SCRN1
LRRC37A3
OAZ1
ADNP
MKRN2OS
MKRN2
CHD1L
PRKAB2
PRKAG2
ZNF70
VPREB3
C7orf26
STC2
RWDD3
SLC22A23
H2BC7
H3C4
H2AC7
H3C10
H2BC13
H2AC13
ATXN2
H2BC14
H2AC14
UNC5A
TATDN2
SUMF2
SLAIN1
RAD54L2
SEC31A
BACH1
NT5C2
SYT14
KDM3B
TLK1
DISC1
LRRFIP2
TBXAS1
HIPK2
SAMD1
ZNF862
C19orf67
THRB
SOD2
DHX9
ZNF213
NRAS
ZBTB37
CHAF1B
WDR48
SCN11A
C21orf91
DENND4B
PPP4R2
MSI2
TACC1
MRPL40
HIRA
HOXA3
UBA2
TIGD1
EIF4E2
SPRY2
GAREM1
TMEM68
TGS1
USP12
ABCB10
JAGN1
THAP12
GVQW3
ANKRD36C
PACS1
GPC4
PHYKPL
GLRX2
CASC3
EPS15
ANP32B
ATXN7
ARHGAP4
RBX1
H2BC15
H2AC15
MTF2
MIER1
BMP2K
ANKRD28
UGT1A3
HSPE1-MOB4
HSPE1
HSPD1
KCNN1
ZNF445
SLC35D1
TRAM2
STX18
DSTYK
HPRT1
SDCCAG8
CEP170
TRDMT1
FNDC3A
INPP5E
UFSP1
ACHE
DBN1
LPGAT1
PPFIA4
TXLNA
DNAJB12
AP1S2
EPM2A
DEGS1
LRIG2
LAMC1
DYNLL2
PHF21B
STAG1
USP34
DIDO1
ACBD6
GCLC
MPP5
SESN1
PIAS1
PTMA
HMGB1
ATXN2L
NBPF1
ZNF652
FAM53C
CDC25C
B4GALT1
POMZP3
PHIP
CDC42
LPAR3
HECTD4
PIK3R1
KANSL3
FER1L5
CMTM3
C15orf61
PBX3
CYREN
TRIM24
GREB1L
RILPL1
SETD6
ZNF76
PHC1
BCAP29
PURA
C18orf21
PFN2
RBBP8
UBE2V1
GCN1
DENND2B
N4BP3
PITRM1
KCNB2
PRR7
PRKRA
PJVK
ZBTB17
B4GALT6
FAH
RAD23A
IGF1R
UBE2Z
EXOC2
MIB1
ARHGAP10
SLC27A4
NPIPB6
RFK
SNAP47
SGPL1
MYBL1
UNK
TCAF1
PKP4
CCDC148
KEAP1
ERICH2
SRSF4
ARHGEF12
NUDT4
TGIF2-RAB5IF
TGIF2
H4C4
H2BC6
TM2D3
SLC39A4
CPSF1
PXK
ZMYND11
RC3H2
TCTE3
ERMARD
ZNF740
PSEN2
CSAD
TPGS2
APBB2
ZNF865
RNF220
WDR37
BTBD1
CD276
IQSEC1
RCN2
H2AZ2
PSTK
DDHD1
TLN1
CREB3
ZBTB38
SRRM3
CAPN7
RBM15
PGBD5
PAFAH1B2
STARD4
MAX
LATS1
ARL8B
WRNIP1
MYLK4
RALB
WDR17
DNAJC6
MID2
SQSTM1
SBF2
MGAT4B
STON2
DTD1
LMO7
GALNT2
RYR2
FHOD3
ARFGAP2
TSC1
GFI1B
DSP
CREBRF
TBC1D5
PEX3
ADAT2
SRD5A3
SOWAHC
SEPTIN10
C17orf75
NOTCH2NLA
PTPN14
JUP
NOVA1
RALGAPA1
FOXD3
KRBA2
H4C5
ACP4
RASA4
MPC2
DCAF6
STUM
TRIM3
THEM4
KMT2E
RABGGTA
DNAH14
HOXB9
GPRIN1
BPHL
E2F3
RFX1
LIX1L
PTPN4
EBAG9
RNF138
GPBP1
RANBP17
ZBTB44
DYNC1LI2
TMEM132A
SMIM13
PCBP2
CNOT8
BPTF
TAB2
PAQR3
STRN
CRTAP
PTPRU
TLE1
DCAF1
FAM131A
PNRC1
PHF10
COG2
ATF1
SERTAD2
SEC22C
NKTR
ATXN7L3
SDC4
ADPGK
DYNC1LI1
NME4
DECR2
NOTCH2NLC
FAM207A
ZFYVE9
ANKRD18B
EPB41
CNIH1
SPACA6
CDC73
BHLHE40
TARBP1
TRIM44
ZNF697
PARP16
PLEKHH3
CCR10
ARSG
ASPSCR1
IMPACT
ERO1A
SLC16A6
RXYLT1
B4GALT7
SPTAN1
CDK13
RNF139
LSS
FBXO30
GET4
PATJ
AMDHD1
RBM26
RNF135
SMARCB1
PRKCQ
CEP68
YPEL1
KCNH1
SYNCRIP
FN1
ZKSCAN2
GAA
HLCS
GATA2
ATRAID
TTC21B
HOXD8
DCBLD1
SRXN1
SLC5A6
RUVBL1
EEFSEC
TSPAN10
NPLOC4
GOLGA1
TAOK1
MSRB2
HDLBP
UBE2L3
CRIM1
RIMBP3C
RIMBP3B
SLC17A5
FNBP1L
TMEM223
TMEM179B
PRRC2A
AIF1
ARSB
PTEN
KLLN
ATF3
DGKH
IQGAP1
ZNF644
BRPF1
ATP1B1
KAT6A
SLC44A1
POLG
RNF38
SRR
SMG6
SLC44A3
H1-7
ZMAT1
ID3
CDC5L
CLN5
PAFAH1B1
SENP8
MYO9A
SRF
SUSD5
CCDC92B
H2BC4
H2AC6
WDR27
C6orf120
COA6
GTF2H2C_2
DNAJC25-GNG10
DNAJC25
FBXW2
GTF2H2
KLHL25
RMC1
LYST
RASAL2
UIMC1
FBXL4
OSBPL6
MAPK8IP3
PNMA1
ROM1
EML3
HES1
SLC2A11
DNAJB2
AKAP13
VDAC3
DTX2
RAPH1
LHX4
MECP2
C3orf80
UBE2N
RBSN
NCBP3
FAM3C
CPOX
CLASP2
RAB43
PDE4DIP
COX5A
THAP9
SPTSSA
NEK7
TTC23
LRRC28
AHCYL1
CHRNA5
COL6A1
LBR
SLC6A9
TMEM250
INSIG1
OTX1
NT5DC1
EIF4G1
TTLL11
ACADM
ZNF609
LRP11
TYMP
SCO2
LMNB1
RNF214
PCSK7
ATP2A2
ACVR1C
SSBP2
USP33
PGBD1
RCBTB1
VPS4A
AK1
ZBTB10
XYLB
MAP2K7
C1orf53
ABI2
RGMA
CEP85L
TVP23B
FZD1
TMCC1
PYGO2
LOC101928120
MRPL38
COMT
TXNRD2
KRAS
DOCK7
NPTN
ACTN2
MNX1
DUSP14
BRPF3
GRM2
YPEL3
TBX6
LRRC8A
KYAT1
MMAA
LYPLA1
CSRNP2
RPL6
MYOZ3
C8G
FBXW5
PTPN11
ANKRD36
PHGDH
RHEB
RMDN2
LARP4B
CDC7
SLC48A1
UAP1L1
KLF9
MTHFS
FOXP1
ARRDC3
STK40
KIF13A
OAT
ROCK2
HDAC1
FGGY
SYNE2
GMNN
SIRT7
NOXO1
GFER
TIGD3
ING5
TIRAP
MLLT1
WDTC1
DENND10
PLEKHF2
TTC7A
MCFD2
LNPEP
SYN3
PSKH1
RRP1B
HSF2BP
DPP8
TULP4
SIK2
PLEKHO2
RPL7
RDH10
GDI1
KAT8
TRAF4
PKN3
IKZF4
ZC3H4
DCUN1D4
CNPY1
FASN
CXADR
EDEM1
JMJD4
RNF19A
MAPKAP1
SEMA7A
CNN3
INTS12
GSTCD
ASAP3
ZNF148
VPS36
CKAP2
TBC1D14
TLCD4-RWDD3
TLCD4
C12orf75
PDCD5
AMOTL1
TSHZ3
ABTB1
EIF4ENIF1
H2BU1
H2AW
ASB13
THAP3
UNC119
NECTIN3
EPB41L2
FOXG1
GGA2
SURF6
TTYH2
NOL7
SCAI
SCAF8
HNRNPA3
JARID2
RCOR2
GZF1
LRP6
SLC25A42
PKM
MRPS24
DCAF10
ZER1
FRA10AC1
MRPL48
SRRM2
IDH2
PRRG4
HOOK1
IGSF3
INO80
PYGL
GPX1
MFSD3
POGLUT3
GPT
TTC21A
GORASP1
NR4A3
TKT
ERO1B
CBX4
PPP4R3A
IKBKB
BRI3
ZFX
OVCA2
ASXL1
RAB23
MRTFB
MAN1A2
COPS7B
UBXN2A
KIAA1522
PDE6D
ZBTB21
TGFBR2
DNAI4
AGBL3
LRP12
UBIAD1
RMND1
ARMT1
ODC1
ATAT1
DHRS11
RCE1
SLC35B2
SLC39A13
CALM1
BOLA3
SLC24A1
INTS14
MCUR1
METTL9
ZNF787
RUFY1
RNF130
FLOT2
ZMIZ2
TEX38
ATPAF1
SEMA4B
LTC4S
ZFP37
DHRS13
PDP1
NOM1
MESD
SYDE2
RCAN3
STK3
GALNT1
CYP2U1
CERS2
UBAP2L
C1orf43
EXOSC6
GBA
SSRP1
P2RX3
PSMG4
HFM1
KCNJ4
TLCD5
TMEM65
INKA2
DDX20