ChIP-Atlas: Target genes

Potential target genes for CPSF3

Query protein: CPSF3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5441335 | HeLa
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
CPSF3's Target genes

◢ CPSF3: Average

◢ SRX8018228: 293

◢ SRX8018229: 293

◢ SRX8018230: 293

◢ SRX8018231: 293

◢ SRX10448664: HeLa

◢ SRX10448665: HeLa

◢ SRX10448666: HeLa

◢ SRX10448667: HeLa

◢ SRX5441330: HeLa

◢ SRX5441331: HeLa

◢ SRX5441334: HeLa

◣ SRX5441335: HeLa

◢ SRX9237243: K-562

◢ SRX9237244: K-562

◢ SRX9237245: K-562

◢ SRX9237246: K-562

◢ SRX8945051: U2OS

◢ SRX8945057: U2OS

◢ CPSF3: STRING

RABL2B
RABL2A
TSN
ZNF335
MAPKAPK5
DYNC1LI2
SRD5A1
NUP85
CACTIN
VDAC2
REXO1
POLR3F
DZANK1
PSMD12
ICE1
IPO13
OAZ3
MRPL9
RWDD1
NVL
CAPRIN1
NME6
HSPA9
NCLN
MRPS7
GGA3
POLR2E
GOSR2
ZNF576
IRGQ
SLC35B1
FAM187A
EFTUD2
CCDC103
SUCLG1
PSMG2
CEP76
C19orf48
LYRM4
FARS2
UBE2I
UPF2
DCTN1
MRPS5
ACTR10
COX7A2L
VTI1B
PSMD1
TAOK3
SUDS3
COMMD1
CCT4
BLCAP
EXOSC5
BCKDHA
VARS1
STAM
RBBP5
CDC73
SEC61B
ALG2
RABGGTB
SART3
ISCU
SKP1
PTGES2
STAM2
HADHB
HADHA
TSNAX
USP1
PI4KB
PES1
ATP5MG
ZRANB2
SNAPC5
PDHX
APIP
TAF9
RAD17
AK6
RPL21
EIF2S3
NDUFA4
FARSB
PDAP1
BUD31
PAK1IP1
C6orf52
SUMF2
RPL17-C18orf32
RPL17
C18orf32
NUP205
PNO1
MRPL24
SUPV3L1
SELENOF
HS2ST1
POLG2
B3GALT4
RPS18
VPS52
AXDND1
VEZF1
ZC3H10
RPL41
TM9SF1
RPS27A
CLHC1
TMED1
PIN4
EIF4ENIF1
GADD45GIP1
NFKBIL1
DDX39B
ATP6V1G2
ATP5F1E
ANAPC7
SMC2
GOLGA5
GCN1
C6orf226
DPH6
APOM
BAG6
RPS23
ATP6AP1L
IQCG
RPL35A
MRTO4
EMC1
RXYLT1
EPN1
BICRA
ANKLE2
EDC4
RIT1
FAM131A
HSPA1B
TTC8
SCRIB
AMDHD2
COX20
PHF23
DVL2
SECISBP2
RPS12
IER3
FLOT1
FAM104A
C17orf80
RBKS
BABAM2
NRAS
H2AZ1
DNAJB14
KRBA2
H2BC4
H2AC6
TBCK
AIMP1
PCBP1
OR6B2
NDUFA10
H4C15
H4C14
AKAP8
UFM1
TLCD1
NEK8
WDR90
ZNF383
MRPL38
H4C12
PAF1
TBK1
C19orf53
MAZ
MPDU1
LOC100996842
CD68
DAPK3
TMPPE
GLB1
SF3B3
COG4
BAZ2A
RRP36
MEA1
CNPY2
RNF166
CTU2
DGKZ
ADK
PROSER1
NHLRC3
AP3M1
GRAMD2A
RPS29
LRR1
LAMP1
TMEM132A
TIMM13
PCBD2
RPN1
DDIT4
ROGDI
ZNF34
RPL8
NANOS1
GTF3C4
DDX31
SEC31A
NAT10
H4C11
XPNPEP3
ST13
DNAJB7
DENR
GET4
CDK12
H4C3
H1-6
CUL7
SYNRG
NAPRT
DNAJC21
OSGEP
APEX1
GLRX2
RPS11
RPL13A
ECI1
NOLC1
DPH7
PRKAG1
UPF3A
INPP5E
UBE2M
CHMP2A
H1-2
CCDC34
MAD1L1
ALKBH5
PFDN5
MYG1
FBXO4
SIRT7
XRN1
PKD1
AHRR
RHOT2
GORAB
TUBB
PHF1
ATAD3A
ARHGAP11A-SCG5
ARHGAP11A
VPS28
PRRT2
PAGR1
POLR2C
H3C15
H3C14
H2AC19
H2AC18
SNAPC4
FDX2
TTC33
RPL7
RDH10
CMTR1
GBA
SPATC1L
POLDIP3
RPL22L1
JUNB
POLR2J3
RPS2
NDUFB10
EIF2D
STK36
RNF25
SYCE2
PNMA1
MSH4
ATAT1
DHRS11
RAD23A
IMPDH2
ZCWPW1
MEPCE
SRSF11
LRRC40
FTH1
C5orf24
THOC5
DNAJC9
CCDC138
MLX
COASY
STUB1
JMJD8
SEC11C
OAZ1
H2BC21
H2AC21
H2AC20
MAPK8IP3
NDST2
NPM3
FGF8
ERCC6L2
UFSP1
ACHE
RPS10-NUDT3
RPS10
RCC1
CISD3
MATR3
PRDX1
BTBD10
NDUFS3
KBTBD4
SLC25A10
DRAP1
C11orf68
UBC
ZNF341
MAP2K2
SLC3A2
SCAMP3
HAX1
SELENOH
SLC39A1
CRTC2
EXOSC6
TRAP1
TOPORS
SMIM27
ZMIZ2
ZBED8
MCOLN1
MAN2C1
ARFGAP2
CHD2
NUDT16L1
TOM1
VPS50
HEPACAM2
COMT
TXNRD2
PRKAA1
CLUAP1
C16orf90
ARHGAP4
MLST8
H2BC5
H1-4
NME3
MRPS34
EME2
CUL9
DOHH
NDUFS7
TRIM65
RBM4
MAML1
FBF1
KLHL11
COX18
USP21
RABGAP1
RPS19
H3C13
H2BC18
RNASEK
C17orf49
ZNF251
TUSC2
CDH24
STYXL1
NOP2
DUS1L
SRRT
GTF2H2C_2
GTF2H2
GPAA1
EXOSC4
ARF3
ASXL1
MOV10
BAG2
GTF2A2
RCOR3
SPCS1
GLT8D1
TNKS1BP1
TRMU
SGSM3
ZNF76
OSTC
H2BC12
H2AC12
PYGO2
LOC101928120
TCF3
RHOF
TMEM230
EIF4H
MDP1
CHMP4A
MRPL40
HIRA
PUF60
TUBA1B
DERA
COX19
MMP24OS
MMP24-AS1-EDEM2
ACTN4
METTL9
DRG2
RICTOR
BNIP3
ZBTB4
SLC35G6
POLR2A
EHMT1
DENND4B
TUBGCP6
RUVBL1
EEFSEC
LMAN2
RPL27
NOXO1
GFER
PMF1-BGLAP
PMF1
SLC39A13
FZR1
HMCES
TRIP13
BRD9
RPS15A
PPP4R3B
DHPS
ROPN1L
SMG5
TMEM79
HSD3B7
TMSB4X
RCE1
PDCD6
MXRA7
WDR97
MAF1
CHD8
CDK16
VPS4A
SELENOO
CXorf38
SLC50A1
DPM3
ANKFY1
FUT11
DPY19L4
CCDC88A
FBXW9
MBD3
ABCF3
LRRC37A3
MFSD14A
PHLDA1
PACS1
EGLN2
MTRNR2L1
H3C12
H2BC17
H2AC17
WDR24
RRAS2
ENOSF1
JAG2
ADAT1
MED26
TXLNA
GGA2
C7orf25
PROZ
MTF2
B4GALT7
PPFIA4
RPL37
DIAPH1
PITPNM2
ECHS1
RARS1
IMPA1
PSMD5
FAM174C
NECAB3
SCARF1
RILP
RAB5B
ALDOC
MTRNR2L8
LRRC24
C8orf82
STYX
TMEM267
GDI1
GAPDH
AURKAIP1
USP3
SURF6
WDR73
NMB
ID1
GPS2
PIM2
TIGD3
H4C2
H4C1
H3C2
SRRM3
TMEM101
FAM189B
IFI30
ZBTB45
GAA
ADPRHL1
TUBGCP5
HOXA3
HOXA5
HOXA6
H4C8
ZNHIT2
FAU
TMEM150A
H4-16
H2AJ
MKRN2OS
MKRN2
B3GAT3
RHOB
SNAP47
TRIM52
PCBP2
JMJD4
H2BC11
H2AC11
CS
SETD6
C5orf15
SLC26A11
SGSH
C12orf73
CD79A
RAB26
CENPBD1
TSR3
GNPTG
VPS9D1
H3-3A
AGO3
BCAP29
NOTCH2NLA
SMN2
SMN1
NT5C
TOR3A
NPAS4
JRK
TYSND1
COA3
CNTD1
IFITM1
IFITM2
NCBP3
COPRS
VCP
MLLT1
SLC39A7
RXRB
HSD17B8
RING1
RECQL4
LRRC14
H2AC4
TAF10
ARSG
TOMM20
PPP1R37
WDR83OS
WDR83
MAN2B1
TELO2
PTX4
ID3
CYB561D1
TEDC2
IFI35
ZNF131
EFNA4
CYC1
SLC39A4
CPSF1
TEKT2
ADPRS
ZSWIM8
CHCHD1
TMEM43
CHCHD4
ATXN2
INKA2
DDX20
PNKP
SPHK2
RPL18
FAM83E
CTNNAL1
NOL7
CIAO3
MIF4GD
CYBA
SLC24A1
INTS14
GPANK1
C6orf47
NUDT15
H4C9
ATAD2
UBA2
SLC39A3
C17orf75
TSFM
TATDN3
NSL1
FAM222B
ANTKMT
CCDC78
MIEN1
LRRC8D
RPL12
LRSAM1
WDR11
NDUFA4L2
H2BC7
H3C4
H2AC7
TSC1
GFI1B
BUD13
GTF2H2C
CYTH1
PEX12
VWA7
NSFL1C
RGL2
INPP5K
NOTCH2NLB
FBXL20
RSAD1
SNRPE
MRPL12
RUFY2
STPG3
NELFB
UBA52
TCF25
PAM16
PDCD2L
ZNF35
SLC12A6
PPP1R15B
NOP10
NFYB
TMCO1
UCKL1
C7orf26
TBCD
TAF9B
PSMC3IP
ELL
COPB1
ITGB3BP
EFCAB7
CLK3
ZNF451
ABCA7
MRPS28
BICD2
MTARC1
BAX
KMT5B
CDK11A
SPOUT1
ZBTB22
TAPBP
SAMD1
KAT5
C16orf71
ANKS3
ARMC7
DAXX
SF3A3
TIPIN
STX16
MTHFS
UBE2Z
ERCC5
TCHP
TMEM107
PSMG1
BRWD1
VMAC
NDUFA11
ATP7A
PIP4K2B
ANKRD12
STRIP1
SP2
PTCD1
CPSF4
SSBP1
OTULIN
PCYT2
MTREX
DHX29
NFAT5
TEX38
ATPAF1
MBTPS1
C8orf33
H4C5
CCDC97
CHD5
WASHC2C
CNP
ADI1
ARL6IP1
ZNF346
UHRF2
GTF2IRD2B
GAS2L1
TAF2
NR1H3
HASPIN
ACP2
LENG9
SKA3
MRPL57
IDI1
TUT1
CHUK
TMEM222
MRPL58
CLN6
NUF2
DHRS13
LSG1
WDR27
C6orf120
SFXN4
AXL
FAM228B
SF3B6
FECH
C12orf57
C16orf46
PTPN6
ANKRD40
KIFBP
CLPTM1L
PLK1
ABTB1
POLD1
TMEM223
TMEM179B
CSRNP2
CDK5R1
GTSE1
MPG
DDX56
CEP72
SCAMP5
CCDC24
NKIRAS1
RPL15
H3C8
H2BC10
TRMT2A
RANBP1
QRICH1
DCAF10
CCDC43
DNAJA3
TAOK2
ROMO1
NFS1
SLC25A42
CHMP6
SEC62
SLC25A17
PRSS27
PBLD
HNRNPH3
PPP4C
STAT3
WDR70
IARS1
PRKRIP1
TMSB10
CD320
THEM4
CCNT1
PAFAH2
DYRK1B
ZZZ3
LOC100287896
LIPT2
TMEM139
CASP2
PHKG2
RNF40
CCDC189
DPP9
EXOC3
ARHGEF35
SSH3
MARCHF7
AMACR
CCDC169-SOHLH2
CCDC169
ZNF296
GEMIN7
SENP1
PFKM
FAM89B
EHBP1L1
PGM1
INTS5
FBXO31
MAP1LC3B
IREB2
TBL1X
FIS1
TAF1D
C11orf54
GMPPB
AMIGO3
TBC1D13
ZC3H6
MRPL44
NOL11
SRA1
RFX1
IDH3B
RNF187
MSTO1
DCXR
CLCN7
AHCY
ZDHHC8
TIGD6
HMGXB3
STXBP4
COX11
H3C1
H1-1
NXF1
LRP6
GPX1
NAXE
MRI1
FRA10AC1
COQ7
HEXD
DMAP1
YAP1
FAM207A
MAPK1IP1L
IL11RA
KIAA2026
WDR47
CYB561
TRIP4
MRPS23
PGS1
SF3B4
ELK1
ANAPC4
POM121C
PWP2
LOC102724159
SMIM13
PRKACA
EEF2KMT
USP30
NOC4L
DDX51
GSTO2
UBB
KMT2D
SMARCD1
SCAP
METTL2B
IFITM3
TYMP
SCO2
MST1
TOB2
SDHA
CCDC127
RMND5B
SPAG5
CHST14
MATN1
TRIM37
LUC7L2
FAM219B
KDM3B
SLC35A3
C6orf136
AGL
ZNF513
USP34
ACTR8
MRTFB
MRPL55
NDUFS6
MRPL36
NIPBL
WDR6
RIPK1
IPO9
ZNF668
ZNF646
ISG20
MTIF2
POMZP3
RASA4B
TSPAN10
NPLOC4
SPSB2
TPI1
NDUFA6
RPS15
MADD
ARPC3
ELK4
AP3S2
SUOX
SPRTN
EXOC8
GRB2
TVP23B
PDPK1
TTLL3
JPT2
RFC4
ZNF414
MRPS36
ADNP
TFPT
PRPF31
DIDO1
MROH1
PDE4DIP
COMMD2
MBD1
EHD1
ZMPSTE24
KIF11
ZNF446
LLGL2
LARP1
EIF4A1
ARHGEF1
RRP8
ILK
SPATA25
NEURL2
CTSA
UNC119
MOB4
PEA15
IL3RA
H2BC8
H2AC8
TXN2
FARP2
SH3D21
AP2M1
WDR55
NR4A1
SUPT16H
EIF4G2