ChIP-Atlas: Target genes

Potential target genes for CPSF3

Query protein: CPSF3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX8018228 | 293
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
CPSF3's Target genes

◢ CPSF3: Average

◣ SRX8018228: 293

◢ SRX8018229: 293

◢ SRX8018230: 293

◢ SRX8018231: 293

◢ SRX10448664: HeLa

◢ SRX10448665: HeLa

◢ SRX10448666: HeLa

◢ SRX10448667: HeLa

◢ SRX5441330: HeLa

◢ SRX5441331: HeLa

◢ SRX5441334: HeLa

◢ SRX5441335: HeLa

◢ SRX9237243: K-562

◢ SRX9237244: K-562

◢ SRX9237245: K-562

◢ SRX9237246: K-562

◢ SRX8945051: U2OS

◢ SRX8945057: U2OS

◢ CPSF3: STRING

H3C15
H3C14
H2AC19
H2AC18
COX20
VPS28
VEZF1
H2AZ1
DNAJB14
B3GALT4
RPS18
VPS52
RRP36
MEA1
ZC3H10
RPL41
IDI1
SYNRG
GH1
FAM174C
RABL6
COL23A1
NECAB3
SGSM3
POLR2J3
SCRIB
H4C15
H4C14
FRG2C
VPS9D1
EDC4
KMT2A
ZNF34
RPL8
POLG2
ZNF581
ZNF580
DONSON
SEC31A
PHF23
DVL2
TLCD1
NEK8
FRG2
INPP5E
STUB1
JMJD8
ID2
EPN1
SNAP47
H3-3A
DPH7
UBE2M
CHMP2A
MAZ
RNASEK
C17orf49
CUL7
TARS3
SNAPC5
ENAH
OTUD7B
PCDH9
PIP4K2B
PRRT2
PAGR1
NUMBL
HYI
ACP4
CCDC200
TMEM132A
MMP24OS
MMP24-AS1-EDEM2
GPAA1
EXOSC4
DNAJC9
ZNF862
NANOS1
ADNP
NRAS
RIT1
AKAP8
ZNF513
GGA2
H2BC5
H1-4
ADARB1
DYRK1B
ANKRD54
TMEM230
AMDHD2
ABTB1
GTF2IRD2B
ZNF653
CABYR
BCAP29
ORAI3
HNRNPU
SUMF2
RPL17-C18orf32
RPL17
C18orf32
MEMO1
GCN1
NAXE
PCNX2
MTHFS
H2BC21
H2AC21
H2AC20
MTRF1L
MAN2C1
HIPK1
RAB4A
CTNNAL1
ARHGAP4
CHAF1B
SECISBP2
DLG4
ACADVL
FNBP1
NUDT4B
CHD2
TAF10
RCOR3
ID3
SDCCAG8
CEP170
PYGO2
LOC101928120
RRM2
MPDU1
LOC100996842
CD68
ST3GAL3
CXorf38
SH3BGRL3
BMI1
COMMD3-BMI1
COMMD3
SLC25A10
ZNF865
CCDC138
PRR7
STIMATE-MUSTN1
STIMATE
H3C13
H2BC18
TOM1
FOXP1
AKAP5
MAML1
POGZ
WDR48
SCN11A
DENND4B
LMBR1
FBXL3
ATP5F1E
PPP3CB
KLF9
ECI1
RPEL1
PRRC2A
AIF1
MORC3
SYCE2
DHRS11
TRIM8
FAM199X
AKT3
VANGL2
KIF27
MORF4L1
SMIM19
SLC20A2
NCOA7
RUFY2
TYMP
SCO2
SEC61A2
PABPN1
SRSF11
MRPL40
HIRA
PPFIA4
KLF12
GPR180
ZNF398
GPS2
KRBA2
C7orf26
LAMTOR3
AGK
ZFAND6
MAPK8IP3
C6orf226
EXOSC6
DPY19L4
ADCK2
RABGGTA
SIMC1
CACFD1
NCAM2
FAM76A
SPATA1
GNG5
PCBP4
LATS1
C17orf75
STC2
PEX7
RNF139
PANK3
HOXA4
OAZ1
ATXN7L2
HMGN2
LRRC37A3
RBM26
FAM219B
IL10RB
ZNF326
SLC25A42
KDM3B
AGO3
PHIP
EDEM1
RABGAP1
PHF1
FLOT2
KAT6A
ACBD6
TBK1
TIMM13
SMYD2
ZFP37
UGT1A3
FSTL3
NBPF1
KANSL1
ARHGAP35
STRIP1
SCAI
LSS
EPB41
PRRC2B
GPX1
B3GALNT2
OPN3
CHML
FAM131A
H4C2
H3C2
H2AC4
TM2D3
SLC25A22
REV3L
SLC44A5
H2BC11
H2AC11
DERA
ATXN7
CELF1
UBXN2A
POMT1
DESI2
ZNF197
TADA1
CLK3
EGLN1
CIRBP
NME3
MRPS34
EME2
POMZP3
USP21
PDCD2
CNIH4
H1-2
SOD2
NDUFB2
ZNF445
GATA2
ACBD3
BOLA3
TEX38
ATPAF1
KANSL3
FER1L5
HFM1
ADIPOR1
H4C5
CCDC106
SLAIN1
TMEM223
TMEM179B
ADAM17
ATAT1
DAPK3
POLR2C
PACS1
SKIDA1
MSI2
CD320
STMP1
NOXA1
ARHGEF11
CCZ1B
PPP4R2
EPM2A
BACH1
PLPP5
TRIM65
NEIL1
AKT2
HDAC10
YBEY
MCM3AP
KMT5B
ZNF148
KIAA1522
UCKL1
NDST2
NUB1
ABL2
TRIM3
BRAF
PXK
SCAMP3
RHOU
EFCAB2
FUT11
TP53BP2
FARP2
C8orf76
WIZ
TMEM35B
DDX59
PHACTR2
PEX6
C1orf21
WDR37
LRRC24
C8orf82
SEC22C
NKTR
NOTCH2NLC
IKZF4
OCRL
FOSL2
MLLT6
UNC119
DENND2B
TTC21A
GORASP1
KCNJ4
ACADM
SSRP1
P2RX3
TOMM20L
NFAT5
MYLPF
TBC1D5
TBC1D10B
E2F3
TPTEP2-CSNK1E
ARFGAP2
PRKAG1
C5orf24
WDR27
C6orf120
RBM5
SRSF4
GDI1
PYCR2
PRKAG2
GGPS1
ARID4B
LRRC61
ACTR3C
DISC1
ARL5A
TSPAN10
NPLOC4
RNF220
GOLGA1
CLN5
LRRFIP2
TMEM184B
RAD23A
BAG2
VARS1
CISD3
LIN9
CAMTA1
PIN4
FAM20B
TIRAP
SATB1
TPGS2
PATJ
E4F1
MAN1A2
FBF1
MARCHF7
COX5A
DNAH14
WDTC1
TRAPPC8
MIER1
LIX1L
MOV10
TRMU
FAM118A
PARP1
ICA1L
B4GALT7
KMT2C
CZIB
AP1S2
TPK1
THAP9
ZNF621
KCTD3
H4C3
H1-6
GTPBP6
IMPDH2
JAK1
RAP2C
ZNF786
CMTM6
C19orf53
LMO7
MYBL2
NADSYN1
DHCR7
GPR137
ZNF341
TRAF4
GTPBP3
ANO8
MAP3K2
MKRN1
COPS7B
PDE6D
TICRR
KHDRBS1
ZNF35
SMARCD2
MPC2
EXOG
DCAF6
BTBD1
MPP5
REEP2
ZNF76
URB2
TAF5L
GET4
SRCAP
LOC730183
TMUB1
FASTK
AGAP3
GAB2
SIRT7
RAD54L2
CDC42BPA
SP1
NF2
EYA4
ARID3B
ZNF771
PHC2
THRB
NCR3LG1
SP3
SNX5
MGME1
ATRIP
VPS36
CKAP2
HEBP2
ZNHIT2
TBXAS1
HIPK2
TM7SF2
PRKRIP1
PURA
NUDT16L1
TXLNA
ROM1
EML3
GATAD2B
ACAT2
LRRC37B
YWHAZ
PITPNM2
PAM16
DOCK7
BCKDK
PSMA4
CAPZA2
POM121C
HNRNPF
TNFRSF6B
CCSER2
MRPL28
CAPN7
CCSAP
HGSNAT
SLC37A3
FOCAD
SCARF1
RILP
CCDC130
SQSTM1
RABIF
PPP1CC
MAT2B
EZH2
MGAT4B
DNAJC11
PIP5KL1
TAOK2
TLL2
SETD6
UBA2
ERLIN1
CUL1
BRWD1
DSG2
MTARC1
CD276
SETMAR
AMMECR1L
GANAB
NCKIPSD
PUM2
CSTB
NAT10
GPC4
GTF2I
TBC1D4
CSKMT
C11orf98
LLGL2
SPECC1L
PCBD2
TIGD3
ZBTB37
ZNF77
KANSL1L
SAMD1
THAP3
DBN1
STK40
URGCP
URGCP-MRPS24
OVCA2
LRRC73
CHUK
ZNF706
XYLB
RPS11
KIAA2026
IQGAP1
TTC13
GMPPB
AMIGO3
TFAP4
FBXW2
KIF23
NID1
MRPL38
HOXA3
IBA57
ARHGEF12
RC3H2
NUDT3
PDE4DIP
MSX2
ATXN10
CD2AP
EIF3CL
EIF3C
MAD1L1
AMDHD1
UNC119B
CCDC38
MSRB2
PHGDH
CACNA2D3
GPN2
NOXO1
GFER
NUDT4
STX6
DHX9
SUMO2
MAPK8IP2
CCDC107
PTCH1
TSEN15
STAU1
ELOA
PBRM1
GNL3
LPGAT1
PWP2
LOC102724159
RPL6
RIPK1
PTPN11
FAM149B1
ECD
GALNT2
NUAK1
PDE8A
AQP11
USF2
USP6NL
SCFD1
VWA7
IAH1
PHF19
PAFAH1B1
UBA3
ARL6IP5
FBXO10
NMD3
RUVBL1
EEFSEC
MFSD14A
SEMA4B
ACTR8
UTP4
DERPC
CHTF8
YBX1
STX7
RALGDS
THSD1
TMPPE
GLB1
CELSR3
SETD5
SPSB3
MIB1
HDLBP
KLHL25
NOMO3
SEPTIN2
NOMO1
FYN
DENND11
GCLC
YWHAB
TRIM52
SSX2IP
VPS26A
CIZ1
ACTN2
GINM1
DNM1
ATXN2
MARCHF6
JPT2
CTF1
BCL7C
MYCBP2
ZNF644
SNX7
RTN4
PCSK6
TAOK1
ATXN7L3
KCTD18
OSBPL1A
FPGS
ANKRD36B
ZNF282
SBNO1
ZNF860
OSBPL10
H2BC7
H3C4
H2AC7
NCOA2
FAM207A
UNC5A
TAB2
MBOAT2
LMNB1
RFX1
WDR73
NMB
POGLUT3
NANS
C20orf144
ACTL10
TPM4
IMPACT
CAPRIN2
DCUN1D4
ZNF629
IL13RA1
SH3D19
DCT
NFKBIA
GAGE2C
GAGE2B
GAGE2A
LONP1
CATSPERD
CYREN
SLC44A3
ZDHHC21
C1orf198
TTLL4
COG2
CEP350
ZMYM4
DGKH
PRC1
DTNBP1
DEK
UBE2R2
ROGDI
CUL9
CTNNB1
ZFYVE9
SMARCB1
MGRN1
PRKD3
RANBP17
TLE4
UBE2J1
FGF18
RNF180
FAM135A
NXF1
FDX2
NFIB
PRKACB
FAM53C
CDC25C
AKAP13
MAP2
RAP1A
MYL6
NPRL3
RPP21
RNF135
SRF
FANK1
VARS2
SELENOH
N4BP3
H4C4
H2BC6
RALB
STUM
MOCS2
DIS3L
LRCH2
RECQL4
LRRC14
B3GAT3
ARSB
SH3GLB1
MNX1
RNASE10
TMEM121B
DDX17
RNF187
NUCKS1
POLR2D
RHOBTB1
STON2
GTDC1
RNF217
ZBTB2
TLK1
RP9
NLRX1
NPM3
FGF8
DRAP1
C11orf68
CSRNP2
NADK
HNRNPA2B1
CBX3
DEGS1
VDAC3
RASL10B
TNFRSF13C
MLXIP
TLCD3A
ZMYND11
SLC22A23
TRIB3
TUBB2A
STOML1
PML
HNRNPAB
HIVEP1
SP2
PNPLA7
MRPL41
MAPKAP1
EIF2D
TTC5
MRPS24
HSPG2
RNF38
THAP12
GVQW3
ATP1B1
SRPRB
MTMR3
PHLDB2
FAM228B
SF3B6
CCDC78
HAGHL
THBS3
MTX1
TIGD1
EIF4E2
NOM1
GALNT11
NGLY1
SLC12A5
WIPI1
ZER1
SGPL1
ZNF384
TDRD7
PDXDC1
BMP2K
HNRNPA3
RALA
TMEM120A
CEMP1
PDCD4
RPAP3
PKNOX1
FEZ2
SMARCC2
PIAS1
ZFR
RTN1
MAPKAPK2
CNOT11
STYX
KIFBP
SBF2
TMEM129
TACC3
KCTD1
BMP8B
MRTFA
FAM122C
FAM122B
UPF3A
SPTSSA
NEK7
HUS1
B4GALT6
C14orf28
CDH24
NKIRAS1
GAGE7
GAGE6
GAGE5
GAGE4
GAGE12I
GAGE12F
GAGE12B
SLC12A6
NR1D2
LTC4S
BPTF
HP1BP3
ZBTB44
STX17
DIPK1A
SPATA9
RHOBTB3
BAZ1B
HPCA
ADAP2
ZBTB12
EHMT2
C2
SFT2D3
FOXJ3
HLCS
NEXN
NPTN
DLK2
KIF7
SNAPC4
SRA1
ADSS2
ZNF740
CSAD
SRSF10
PHC1
NPHP3
JUP
VANGL1
NCKAP1
UBE2A
KAT2B
ZEB2
VTI1B
CALM1
METRN
SORT1
CHD1L
ZNF652
TATDN2
TOR1B
SOCS1
GSN
RAB14
ZNF24
SPATC1L
SPOUT1
HMGN1
ING5
SPIN1
UBTD2
C9orf40
CORO1B
PRKAA2
PITRM1
PRRG4
SMARCA1
FZD2
MED14
CEP120
TET2
SCAPER
PTBP1
HOMER2
IGF1R
ZNF584
KAT8
SLC26A6
DEDD
PRPSAP2
PRPF40B
SLC2A11
ODF3L2
PGBD5
DUSP14
TOP2B
ZBTB24
PRSS23
VRK2
NRIP1
EIF4ENIF1
PNMA1
MIF4GD
ACOX3
ZBTB20
SEC16A
C9orf163
GPAT4
CCDC71
CFL2
MIA3
SREBF2
COX19
DPY19L3
PSMD3
ELAPOR2
C1orf115
EOMES
DSE
SH3GL3
SPAG9
RCCD1
MTG1
GDPGP1
CIB1
CLSPN
C18orf21
SCOC
ARL8B
CCDC77
SDC4
KDM5A
AKTIP