ChIP-Atlas: Target genes

Potential target genes for Cdk9

Query protein: Cdk9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX104410 | ES cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Cdk9's Target genes

◢ Cdk9: Average

◢ SRX9144814: 3T3-L1

◢ SRX9144815: 3T3-L1

◢ SRX9144816: 3T3-L1

◢ SRX9144817: 3T3-L1

◣ SRX104410: ES cells

◢ SRX11717263: ES cells

◢ SRX11717264: ES cells

◢ SRX11717265: ES cells

◢ SRX11717266: ES cells

◢ SRX236483: ES cells

◢ SRX020971: Macrophages

◢ SRX020972: Macrophages

◢ SRX020973: Macrophages

◢ SRX020974: Macrophages

◢ SRX1550527: Macrophages

◢ SRX1550528: Macrophages

◢ SRX255482: MEF

◢ SRX277329: MEL

◢ SRX3200439: mESC derived haemogenic endothelium

◢ SRX3200440: mESC derived haemogenic endothelium

◢ SRX3200441: mESC derived haemogenic endothelium

◢ SRX620286: NIH/3T3

◢ SRX620287: NIH/3T3

◢ SRX620288: NIH/3T3

◢ SRX620289: NIH/3T3

◢ SRX735308: Th1 Cells

◢ SRX735309: Th1 Cells

◢ SRX735310: Th2 Cells

◢ SRX735282: Unclassified

◢ SRX735292: Unclassified

◢ Cdk9: STRING

Tcstv3
Cldn34d
Kpna1
Zfpm1
Comp
Slc44a2
Map2k4
Brox
Aida
Tsga10
Klhl36
Mfge8
Olfr806
Abhd6
Wwox
Zdhhc20
Dok4
Tbc1d16
Ccdc40
Angel1
Tnfaip8
Mfap3l
Il31ra
Nkd1
Psen2
Pcgf5
Nrbp2
Spata2l
Lrrfip1
Kazn
Aadacl2fm1
Plxnd1
2310022B05Rik
Abtb1
Dennd4c
Gm2a
Acsl1
Trrap
Znrf3
Xylt2
Txndc5
Pdp1
Pknox1
Ccsap
Cpm
Eif2ak4
Usp12
B4galt5
Degs1
Nde1
Marf1
Cers5
Garem1
Cmtm4
Rassf4
Acer3
Tpmt
Kdm1b
Dlc1
Slc8a2
Arfgap3
Nxn
Atox1
Phf23
Dvl2
Pole4
Orai1
Smurf1
Sesn1
Cep57l1
Rad51ap2
Prpf40b
Adpgk
G3bp2
Uso1
Plag1
Ccdc112
Tspan17
Cadm4
Sema3f
Tmem123
Tpst2
Iffo2
Asap3
Fzr1
5031439G07Rik
Slc19a2
Glrx3
Sspn
Slc8b1
Zc3h12a
Sp1
Asmt
Gdpgp1
Cib1
Gatad2a
Trappc2l
Galns
Anapc4
Usp3
Vps26a
Foxl1
Acads
Snx8
Napepld
Ppp2r5c
Fbxo43
Itga2b
Usp44
Homer3
Pip4k2b
Prodh
Esr1
Pak1
Vgll4
Raly
Ldlrap1
Dusp11
Hpcal1
Slc12a4
Larp1b
Saraf
Tbc1d14
Chaf1b
Dchs2
Cdc42se2
Pdk1
Micall2
Slc29a4
Twsg1
Add3
Ctdsp2
Ogfod3
Hexdc
Tmtc2
Csgalnact2
Zbtb2
Bcam
Xpr1
Rab22a
Zfp28
Csf2ra
Spsb1
Tspan14
Hebp1
Slc25a15
Oasl1
Apc2
Ccdc9
Litaf
Ripk2
Arhgef3
Esd
Ing5
Dtymk
Acadm
Pofut2
Traf5
Mapk8
Anxa11
Gpr155
Nmt2
Aacs
Xpc
Lsm3
Ankrd50
Qsox1
Ell
Garnl3
Vkorc1l1
Snx22
Pim1
Pitx3
Gbf1
Dynlt1b
Tnip2
Mesd
Tmem169
Pecr
Eef2kmt
Pex10
Dars
Sh2b3
Rell1
Bicdl1
Kctd6
Tmem64
Gpr157
Atl2
Trim21
Zfp143
Gxylt1
Prdx3
Sertad2
Frat2
Hs6st1
Jund
Iqcn
Ifna13
Klf16
Vav2
Cmip
Tmub2
Afg3l2
Rab43
Yars
S100pbp
Nepro
4921524J17Rik
Vtn
Sarm1
Pwwp3a
Snx21
Ctnnbip1
Id3
Lss
Tmem158
Lnpep
Scarb1
Copg2
Glt28d2
Brpf1
Slc2a13
Dynlt1a
Fnbp1
Fgfr3
Fam210b
Arrdc1
Gins2
Nup107
Tmem87b
Spryd7
Sgtb
Nln
Pkd1
Pias1
Prex1
Nfe2l2
Zbtb37
Cmtm6
Crocc
Bcap31
Abcd1
Mios
Papolg
Dnm3
Gk5
Slc4a11
Rhpn2
Prpsap2
Inpp5a
Clybl
Paqr3
Lonp1
Catsperd
Wipi1
Dnpep
Dop1b
Rbm38
Dera
Ntmt1
Rab39
Mnd1
Helb
Zhx1
Urb1
Gja3
Pou3f1
Baiap2l1
Osbp2
Mtrf1l
Ola1
Kirrel2
Tmem125
Lamc1
Kat6b
Jrkl
Ccdc82
Rbis
Sytl3
Rmdn1
Dynlt1f
Dynlt1c
Plcd1
Cpne3
Sp4
Gcnt1
Fah
Gng12
Fez2
Nemf
Shcbp1l
Tom1
Setmar
Notch1
Plcd3
Acbd4
Llgl2
Ldlrad3
Mindy2
Ascc2
Cyld
Mast3
Ctnnal1
Crmp1
Spata13
Bhlha15
Erc1
Clic4
Cpt2
Usp28
Tctn1
Gpc5
Abcb9
Rbbp6
Med26
Ppp2r3a
Slc38a10
Chmp5
Bag1
Trappc4
Rps25
Mapk9
Pgbd5
Avpi1
Tmem220
Cep55
Ern1
Sdhc
Mpz
Gpbp1
Rab11fip1
Mfsd14a
Opn3
Chml
Fam227b
Dtwd1
Zfp746
Tbc1d2
1110008P14Rik
Tent5c
Atp1b3
Tppp
Nrtn
Fbxl21
Syn2
Agpat2
Tram2
Sntg2
Brd3os
Copz1
Bri3
Mpc2
Dcaf6
Plekho2
Grsf1
Slco4a1
Cep70
Vgf
Cox19
Impa2
Stx1a
Mex3d
Rxylt1
Hddc2
Dipk2a
Tmem221
Cactin
Ing2
Sptbn4
Blvrb
Megf6
Tec
Trp53bp2
Tmem41a
Atp7b
Alg11
Frmd6
Rrbp1
Ndrg2
Myo6
Ssh3
Spire2
Slc22a21
Iqce
Brat1
Smg1
Slc22a5
Kif27
Dnajc16
Casp9
Hk1
Fbxo31
Acy1
Pcyox1
Sowahc
Septin10
Rab3d
Pnpla3
Celf6
Adap2
Sec23a
Gemin2
Mboat2
Acer2
Sugct
Mplkip
Rnaset2b
Rnaset2a
Fam76a
Plk3
Csnk1g2
Lims1
Zfp78
Plrg1
Fancc
Nt5dc3
Ppargc1b
Kremen1
Wdr20
Otud1
Avl9
Dlg4
Adh5
Inpp4a
Ywhab
Sh3bp4
Slc29a3
Nadk
Ppfibp1
Eepd1
Mphosph10
Mcee
Adss
Ak7
Clcn3
Habp4
Sergef
Btbd2
Optn
Fbxo5
Mgst3
Rnf2
Polr1d
Lnx2
Ltc4s
Ube2g1
Golga5
Plekhg5
Tmem132c
Gpc3
H6pd
Nt5c3
Pqlc3
Capzb
Limk1
Lonrf1
Fam219a
Dnaic1
Tmed6
Ahsa2
Itprid2
Cyb5r1
Akap7
Polr1e
Spa17
Siae
Znfx1
Txnrd3
Syt14
Prkar1b
Dnaaf5
Inpp5f
Ppfia3
Lin7b
Anxa5
1810062G17Rik
Osbpl9
Foxn2
Rc3h1
Fhod3
Wdr76
Mfap1a
Prrc1
Slc37a4
Vcl
Ubr3
Heatr1
Tbc1d23
9430038I01Rik
Cdc34
Tmem50b
Camsap1
Setx
Tufm
Rassf3
Actr5
Ebag9
Arhgap29
Rabep2
Pter
Manea
Ep400
Hspg2
Mospd3
Agps
Nbeal1
Nfkbie
Ap3d1
Zfp983
Clec11a
Dhdds
Shank1
Ogfrl1
Rpl31
Mbd2
Zfp664
Ccdc92
Ppfia4
Ptms
Rrm2b
Phf10
Ankrd10
Arrb2
Wrn
Purg
Tmem240
Abhd18
Slc19a1
Brf1
Xpnpep1
Uqcrq
Gdf9
Sdc1
C1ql1
Eea1
Mertk
Xkr8
Klc3
Tmem192
Micu1
Atg14
Ctbs
Tarsl2
Gdpd5
Hps6
Armh3
Arhgef17
Senp8
Myo9a
Man1c1
Phc2
Pop7
Orai3
Strada
Ap3m1
Adk
Skap2
Ccdc85c
Hic2
Acot7
Saysd1
Sox12
Amz2
Epb41l2
Shank3
Trip10
Gpr108
Fzd9
A930018P22Rik
Nod2
Kcnq3
Tm2d2
Adam9
Lsm11
Trappc9
Pbx2
Gpsm3
Hmox2
Mcm9
Aprt
Hspa2
Txn1
Fbrsl1
Smox
Mybl2
Pgpep1
Ipo5
Slc25a40
Dbf4
Zdhhc2
Pxn
Stk32c
Ralgapa2
Usp33
Serinc5
Scyl2
Coro1b
Edem1
Zfand1
Castor1
Usp20
BC005624
Drap1
AI837181
Dhx35
Klhl26
Rasip1
Izumo1
Atp23
Gigyf2
Med16
Prr12
Ost4
Dusp3
Cfap97d1
Ginm1
Tgif2
Scaf1
Rras
Wwtr1
Stim2
Tfam
Pard6g
Jph1
Foxi3
Dcxr
Cbr2
Rnft1
Eloa
Zfp865
Zfp524
Fiz1
Cers4
Mapk13
Gamt
Dazap1
Trnau1ap
Tmem69
Gpbp1l1
Rhbdf2
Isyna1
Eml4
Col5a1
Pias3
Tspan15
Lingo3
Idua
Dgkq
Zfp868
Caprin2
Dnaja2
Snap29
Pi4ka
Atp8b3
Elavl3
Fxyd7
Fxyd1
Mxi1
Gng7
Mrpl2
Klc4
Cul7
Mlf2
Myo10
Dsel
Wdr17
Rock1
Rap1gap
Efna3
Arhgef19
Klf11
Ulk1
Vkorc1
Wnk2
Shmt1
Wwc2
Ankrd24
Kifc2
Cyhr1
Sipa1
Fstl3
Myh9
Sart3
Iscu
Ninj1
Snx25
Bcl3
Aunip
Mtch2
Pygo2
Ralgds
Pdcl
Adipor2
Prxl2c
Marchf9
Cdk4
Mknk1
Dio3
Brwd1
St3gal1
Axin1
Thbs3
Mtx1
Tmem134
Aip
Sumo3
Abcc4
Fosl2
Pcid2
Cul4a
Lrig1
Zfp318
Yif1b
Myadm
Cdh12
Tmcc1
Tmem126b
Mzt1
Bora
Zfr2
Ptprn2
Epb41l5
Cgn
Atcay
Pcgf3
Prkra
Pjvk
Tmem59
Tceanc2
Kri1
Cdkn2d
Ackr3
Rassf8
Tent4b
Trim3
Polr2h
Clcn2
Usp45
Ttc38
Slain2
Ptpn4
Gng8
Slc41a3
Nphp3
Il12rb1
Bach1
Dcaf5
Snx1
Ciao2a
Inafm1
Zfp53
Ncapg
Acvr2b
Il17d
Tpi1
H2bc6
H1f4
Fbxo11
Tle6
Pa2g4
Iqgap1
Kcnh2
Gdf6
Bag3
Lrrc27
Usp7
Pgm2
E2f1
Abhd17a
Srebf2
Chid1
B4galnt3
Dgkd
Smim20
Tmem177
Pbld2
Hnrnph3
Ahcyl1
Birc6
Ppp1cb
Por
Pdhb
Sqle
Dennd4a
Nova2
Malt1
Stom
Prxl2b
Anxa7
Uba52
Rex1bd
Cbfa2t2
Snx6
Lck
Stard5
Ppie
Nkx6-1
Kank3
Aco1
Myo1c
Sh3bp2
Tmem86a
Pawr
Prr5
Nectin2
Vmn2r102
Ppp1ccb
Ppp1cc
Gtdc1
Prkdc
Gcc1
Arf5
Crim1
Zfp516
Nup93
Pacs1
Pcnx4
Raver2
Lrrc3
Hcn2
Fsip1
Etnk2
Sipa1l2
Mxra7
Magi3
Fam177a2
Fam177a
Trim62
Map2k2
Psmc6
Armc5
9130023H24Rik
Map3k14
Smim7
Fam120a
Tbl2
Srd5a1
Nsun2
Pygl
Plekhg6
Slc25a1
Neu3
Gls2
Cdh15
Nampt
Kank2
Prkcd
Asb1
Fbxo21
Bcl9
Zfp791
Mob3a
Izumo4
Inpp5k
Irx5
Slc27a1
Nxnl1
Sh2d3c
Lrrc63
Lcp1
Fam20b
Elmo3
Lipt2
Gabrb3
Tpt1
Psd
Fbxl15
Nckap5l
Mpp7
Ccser2
Irx2
Ppp1r21
Scpep1
Espn
Hspa12a
Lrpap1
Tspan9
Tmeff1
Slc6a3
Mllt10
Psmd12
Cyrib
Tmem260
Kdm2b
Stard9
Coa7
Sbk2
Trp53i13
Ccne1
Tpcn1
P2ry2
Iqcd
Gm12500
Ampd2
Abhd15
Efr3b
Fth1
Vps37c
Tbc1d17
Akt1s1
Rbpms
Arhgap17
Cyth1
Nbeal2
Ccdc12
Slc17a5
Vsig10l
Cap1
Mphosph6
Stk3
Zfand2b
Ehd2
Marchf2
Nudt7
1700030J22Rik
Ell3
Mafk
Qrich1
Rnf149
Bnip3
Fnip2
Cdk10
Ikbip
Apaf1
Dennd2c
Sypl
Nabp1
Cdkn2aip
Ikzf5
Acadsb
Marchf3
Bpnt2
Gmps
Stx7
Gm10509
Jcad
Fam241a
Xylt1
Slc4a8
Igfbp5
Exosc9
Eda
Alg6
Kif1c
Inca1
Megf9
Pmm1
Usp43
Svip
Rasl12
Pi16
Fbxl3
Fam193a
Polk
Cert1
Zfp507
Rnf31
Psme2
Cd59a
Dnajc21
Dixdc1
Cacfd1
Fkbp3
Fancm
Arsa
Hlf
Bspry
Aph1b
C2cd4c
Bard1
Tedc2
Prss16
Atg10
Cnn3
Rab2a
Polr2d
Rwdd3
Ppp4r4
Phldb3
Kiz
Sar1a
Ppif
Npc2
Isca2
Abhd17c
Tmem120b
Pak4
Lrrc3c
Pdlim5
Ttc7
Ugp2
Scyl1
Specc1
Slc25a30
Rffl
Lrrc42
Hspb11
Cd38
Mief1