ChIP-Atlas: Target genes

Potential target genes for Cdk9

Query protein: Cdk9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX255482 | MEF
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Cdk9's Target genes

◢ Cdk9: Average

◢ SRX9144814: 3T3-L1

◢ SRX9144815: 3T3-L1

◢ SRX9144816: 3T3-L1

◢ SRX9144817: 3T3-L1

◢ SRX104410: ES cells

◢ SRX11717263: ES cells

◢ SRX11717264: ES cells

◢ SRX11717265: ES cells

◢ SRX11717266: ES cells

◢ SRX236483: ES cells

◢ SRX020971: Macrophages

◢ SRX020972: Macrophages

◢ SRX020973: Macrophages

◢ SRX020974: Macrophages

◢ SRX1550527: Macrophages

◢ SRX1550528: Macrophages

◣ SRX255482: MEF

◢ SRX277329: MEL

◢ SRX3200439: mESC derived haemogenic endothelium

◢ SRX3200440: mESC derived haemogenic endothelium

◢ SRX3200441: mESC derived haemogenic endothelium

◢ SRX620286: NIH/3T3

◢ SRX620287: NIH/3T3

◢ SRX620288: NIH/3T3

◢ SRX620289: NIH/3T3

◢ SRX735308: Th1 Cells

◢ SRX735309: Th1 Cells

◢ SRX735310: Th2 Cells

◢ SRX735282: Unclassified

◢ SRX735292: Unclassified

◢ Cdk9: STRING

Srsf2
Mfsd11
Ddx5
Cep95
Rpl3
Srsf7
H3f3b
Actb
Fus
Ddit4
Ubc
Sp1
Tuba1b
Ier3
Flot1
H4c14
H3c15
H3c14
H2ac19
H2ac18
Tuba1a
Setd5
Atf4
Tmem125
Cirbp
Fam174c
H4c11
Mat2a
Ppia
Fth1
Anapc5
Calm1
Hnrnpa2b1
Cbx3
Chrac1
Errfi1
Id3
H2bc21
H2ac21
H2ac20
Tpm1
Insig1
Pdlim7
Junb
H3c6
Ldha
Gm3448
Gm3417
Tcte3
Gm3435
Puf60
Zfp866
Slc3a2
Gpx1
H4bc24
H2bc23
H2ac24
H2ac23
H4c17
Dusp1
Fam53c
Urgcp
Ptbp1
Rplp0
Ptpn2
Ccn1
Id1
Rsrp1
H2bc6
H4c4
Irf1
Ftl1
Pkm
Smarcb1
Ier2
Mknk2
Atad2
Mcl1
Tob1
Sdc4
Hbegf
Timp2
Ncl
P4ha1
Ndufs7
Eef1a1
Slc35g3
Polr2a
Col1a1
Mif
Mthfd2
Lgals1
Ptgs2
Hnrnpab
H3c13
H2bc18
Map2k2
G3bp1
9030025P20Rik
Kansl2
Klf7
Nabp1
Slc9a1
Klhl9
Sgf29
Eci1
Rps20
Fasn
Ccn2
H4c8
H3c8
H2ac10
Taf12
Ier5l
Cd24a
Zfp963
Gapdh
Tubb4b
Tmpo
Bclaf1
Pcnt
Dele1
Tmem123
Vim
H2az1
Dnajb14
Poldip3
Znfx1
Trib3
Tex14
Nfkbia
Birc2
Pcna
Ppp1r10
Mrps18b
Hspa5
Tob2
Dnajb12
Pcif1
H4f16
H2aj
Hsp90aa1
Nubp1
Jpt1
Amotl2
Gm13285
Gm13290
Gm13289
Sgk1
Polg2
Prdx1
Usp18
Zfp119b
BC005537
Washc4
Hnrnph1
Immt
Aldoa
Sqstm1
Smarcc2
H2-DMa
Brd2
Csf1
Slbp
Cstb
Matr3
Slc25a4
Actg1
H4c2
H3c2
H4c1
Socs3
Knl1
Scamp4
Adat3
Zfp53
Btg1
Atp6v0c
S100a10
Amdhd2
Parp10
Grina
Plau
Nufip2
Tmem79
Smg5
Nup62
Il4i1b
Atf5
Gpr19
Alg1
H2bc3
H3c3
Hmox1
Snx5
Mgme1
Tnfrsf12a
Thoc6
Hcfc1r1
Cldn6
Dnajb4
Fubp1
Mphosph9
2810006K23Rik
Fbxo31
Uba2
Gnb1l
Grin2d
H3c10
H2bc13
H2ac13
Tmsb10
Nsrp1
Ahnak
Kat7
Swap70
Ctnnb1
Ermard
Nfe2l2
Gm13275
Gm13279
Gm13278
Gm13277
S100a6
S100a5
Impdh2
Amacr
Rab5b
H4c12
H2bc15
H2ac15
Gtf3c6
Pfkl
Hsp90ab1
H3c11
H2bc22
H2ac22
H1f5
Acer3
Dnajb1
Napepld
Serinc1
Slc12a4
Slc38a2
Pdss2
Sike1
Usp10
Ostm1
Hsf1
Bop1
Fam227b
Dtwd1
Zfp598
Pik3r3
Actn4
Zfp433
Gm32687
Eif4a1
Pkd1
Tuba1c
Cse1l
Zfp36l1
Cltc
AU041133
Mettl25
Ccdc59
Rps27rt
Rab13
Seh1l
Ndufs8
Pygo2
H1f2
Larp4
Spg11
Rad50
Kdsr
Pole4
Ier5
Tnfrsf1b
Commd10
Atf1
Rnd1
Gm13276
Ifnz
Gm13272
Irf2bpl
Rsph3b
Cldn34d
Dnaja1
Sod1
H2bc1
H2ac1
Aars2
Eed
Slc16a1
Slc7a5
Pofut2
Tubb2a
Hexb
Epc1
Atxn10
Armc5
9130023H24Rik
Eef2
Arrdc2
Trmo
Srsf6
Polg
Rnmt
Fam210a
Tmem80
Deaf1
Egr1
Ddx59
Cdkn2b
Tfrc
Lcmt2
Adal
Ncaph2
Lmf2
Tti2
Rrm2b
Psap
Iba57
H2ac4
Tmco1
Zfp672
Mgat1
Bsg
Ankrd52
Ssbp1
Klf10
Hdhd2
Eapp
Eif5
Baiap2
Calm2
Cops3
Ano6
Slc29a3
Utp18
Mbtd1
Ubb
Myl12a
Gm13287
Morc2a
Myo5a
Uvrag
H1f0
Gcat
Tab1
Zc3hav1
Utp14b
Acsl3
Cdc42ep1
Sephs2
Pkmyt1
Tango6
Ppp1r15a
Plekha4
Lmbr1l
Tmx4
Aacs
Fscn1
Grb2
Agpat2
Pmf1
Dse
Hspa8
Thbs1
H3c7
H2bc9
Gls
Tmem175
Gak
Mbd3
Rabif
Psmg4
Pithd1
Ifi211
Ranbp2
Zzz3
Inpp5k
Abcd3
Zfp839
Mok
Glo1
Lipt2
B2m
Lbh
Birc6
Nabp2
Mtfr2
Eif3a
Atp5g2
Srek1
Rnf111
Phtf1
Pigq
Nhlrc4
Paip2
Ran
Nenf
Taf4
Rrn3
Mfsd5
Eef1akmt2
Serinc3
Rplp1
Cpt1b
Chkb
Hint3
Prr12
Ogfod1
Nudt21
Fadd
Arhgap28
Zfp959
Slc20a1
P4hb
Cers5
Ptpa
Crat
Tcerg1
Tmem198b
Dnajc14
Ywhaz
Bhlhe40
Ptges3
Sowahc
Septin10
Bst2
Cxcl1
Zfand5
Usp53
Ttc17
Reep3
Nfkbiz
H2bc4
H2ac6
Rabggtb
Cox20
Mob1a
Otub1
E130311K13Rik
Ptk2
Pacc1
Gm9949
Adrb2
Gtf2a1
Setd1b
Phf20
Plk2
Gtf2b
Klf2
Tekt2
Adprhl2
Ndrg1
Reep5
Lmna
E2f7
Plec
Rbm33
Azin1
Rnf216
Atf7
Tdg
Lsm2
Rsph3a
Efcab2
H3c1
H1f1
Rnf10
Prkar1a
Pcmt1
Rps13
Topors
Smim27
Glce
Nup43
Chac1
Zfp36l2
H2ax
Uhmk1
Oaz1
Srsf5
Ctsl
Sec61a2
Epg5
Slc26a6
Epha2
Top2a
Tspan15
Uspl1
Rpl13
Srp68
Zdhhc3
Exosc7
Rnpep
Dapk3
Josd1
Gtpbp1
Brms1
B4gat1
Cebpb
Slc25a3
Ndufa6
Septin11
Anxa2
Ptprk
Timeless
Eif1
H1f4
Vcl
Pnrc1
Pcbp1
Nsd3
Letm2
Cutc
Cox15
Zfp689
Specc1l
Dnajc19
Jpt2
Sirt4
Cdk12
Sptan1
Gm13288
Rps6
Arid5a
Dynll2
Kctd20
Sparc
Zkscan8
Nop58
Pik3cb
Lrrc20
Tcim
Rpl10a
Yap1
Rufy1
Gdpd1
Pdxp
Fdxr
Tubb6
Birc5
Vps54
Mrfap1
Cmtr1
Dhrs13
Def8
Wsb1
Plxdc1
Eprs
E4f1
Rtn4
Rmdn1
Cavin3
Ndufa2
Ik
Atp6v0e
Txlna
Slc5a6
Atraid
Zranb2
Ankhd1
Wbp4
Elf1
Flcn
Rab11a
Gamt
Dazap1
Prune1
Mindy1
Ckap2
Itpr3
Slc2a1
Ep300
Rnf14
Ccdc62
Bricd5
Mlst8
Pus7l
Irak4
Tsc22d1
Rhob
Rfx3
Lsm14a
Amd2
Amd1
Gpank1
Csnk2b
Cav2
D17H6S53E
Uck2
Jund
Iqcn
H4c6
H1f3
Hnrnpa1
Cbx5
Pafah1b1
Hmgcr
Dhx9
Rnpc3
Sp2
Sesn1
Zdhhc17
Spag7
F2r
Cep57l1
Ubap2
Itga5
Zc3h6
Mbd6
Ddit3
Taf13
Skp1
Nuak1
Ksr1
Heatr4
Acot2
Ate1
Ccn4
Npm1
Cdr2l
Agbl5
Asph
Ddx21
Nudt8
Doc2g
Spats2
Uhrf1
Arrdc5
Adprh
Nfe2l1
U2af1
Dusp10
1700056E22Rik
Cdca4
Dis3l
Sac3d1
Mtap
Nprl3
Tmem88b
Ulk2
Hspa9
Ube2g1
Snai1
Plin2
Cd63
Tmem134
Aip
Drg1
Serpine1
Zfp36
Cap1
Naca
Kdelr2
Sertad1
Pih1d1
Aldh16a1
Polr3b
Cavin1
Nae1
Car7
Rhot2
Plscr3
Gsk3b
Ercc4
Zfp637
N6amt1
Zscan25
Hmga2
Gm13283
Angel2
Nol7
Fignl1
H3c4
H2bc8
H2bc7
H2ac8
H2ac7
Srsf3
Rps12
Parva
Gpx4
Dtwd2
Hp1bp3
Nus1
Fxr2
Bbc3
Tymp
Sco2
Amn1
Arl14ep
Txn1
9530077C05Rik
Anln
Chka
Ppdpf
Ipo7
Gxylt1
Cfap97
Mnd1
Cep43
Pdcd2
Zfp800
Hk1
Cited2
Rpl5
Trp53rka
Zfp692
Hmgxb3
Fam122a
Zfp568
Mettl26
Snx3
Sp4
Phlda3
Psmd7
Cd164
Ttc7
Map2k1
Mrpl33
Bola1
Slc44a1
Tjp3
Pip5k1c
Ccnl1
Pdlim5
Zfp655
Rpl17
Osbpl8
Ipmk
Cisd1
Kitl
Arhgap29
Ybey
Mcm3ap
Dph6
Pttg1ip
Nupr1
Plpp2
Zfp868
Tcf25
Nars
Timm13
Wdr4
Arhgdia
Adss
Ubl7
Grpel2
Prpf38a
Orc1
Cflar
Ddah1
Tnrc18
Stmn1
H4c3
H1f6
Ppp1r12a
Maff
Hdac7
P2rx4
Clip1
BC029722
Bbs10
Fads2
Pcbp3
Fgfbp3
Kpnb1
Ccnl2
Pdcd6ip
Rnaset2b
Rnaset2a
Hjurp
A730008H23Rik
Ttc9c
Hnrnpul2
Gtf2f1
Spg20
Hddc2
Rufy2
Zfp74
Zfp282
Zbtb22
Tapbp
Sf3b5
Wdtc1
Oas1g
Cdkn1a
Btg2
Hlcs
Tarbp2
Map3k12
Grasp
Rad54b
Wdr45b
Csnk2a1
Osgin2
Tpt1
Zfp1
Calr
Elk4
Pank2
Cdkn1b
Esd
Focad
Cks2
Zfp869
Gabpb2
Susd6
Camk2d
Slc25a46
Zfp119a
Mtres1
Scpep1
Zfp523
Ostf1
Nmrk1
Esyt1
Slc38a7
Mcm9
Ptma
Frmd6
Mrps18a
Cnpy3
Luzp1
Pyurf
Fubp3
Trmt112
Prdx5
Vgll3
Romo1
Nfs1
Herpud1
Rps8
Gars
Ube2z
Ppp2ca
Zfp213
Atf3
Wipi1
Slc25a39
Ctnna3
Fam102a
Smad4
2310039H08Rik
Zfp251
Fmn1
Sec61a1
Sp3
Mbnl1
Klhl24
Tsg101
Rps14
Plpp1
Tdp2
Acot13
Aurkaip1
Gm33989
Dstyk
H4c9
H2bc11
H2ac11
Hmgb2
S1pr4
Ncln
Recql4
Lrrc14
Gtpbp8
Vps35
Orc6
Plscr1
Api5
Ago3
Cycs
Ankle2
Stxbp3
Prkdc
Wipi2
Zfp428
Vcp
Jmjd1c
Fancl
Mcm4
Exosc8
Alg5
Laptm4b
Tiparp
Selenot
Rab21
Crk
Alas1
Atp2b1
Dennd6b
Cdk11b
Usp8
Ankrd24
Ap1m1
Sirt6
Adamts14
Mdm2
Sfi1
Ndel1
Arf4
Peli1
Pim1
Trim41
Zc3h18
Mapk6
Med11
Phactr4
Rbl1
Prrx1
Sigmar1
Trim59
Chrnb1
Srsf1
Nfyc
Dennd6a
Trim39
Tor1aip2
Tor1aip1
Ankrd37
Nab2
App
Hps6
Armh3
Pgam5
Bicd1
Htra1
H4c18
Rnf19b
Alad
Tent4b
Mtif3
Hmga1b
Hmga1
Fam160a2
Cnga4
Tmem86a
Cdkn2c
Odc1
Myh9
Dusp11
Sec62
Cnbp
Dip2b
Birc3
Mettl23
Ubqln1
Nhlrc2
Dclre1a
Ube3a
Ascc1
Anapc16
Naa16
Sf3a2
Plekhj1
Pmel
Cdk2
Afg1l
Apol9a
Rab5if
Ddhd2
Il6ra
Rab11fip2
Ece1
Dcp1b
Cuedc1
Rhobtb3
Kifbp
Yeats4
Gorasp2
Mak16
Bola3
Aldh3a2
Mis12
Derl2
Trim33
Irgm1
Galk1
Zbtb43
Ncbp2
0610012G03Rik
Ctdp1
Ankrd17
Zfp706
Mtmr10
Prpsap2
H2aw
Vdac1
Qrich1
Aarsd1
Zfp248
Ikbip
Apaf1
Cnpy2