ChIP-Atlas: Target genes

Potential target genes for Rara

Query protein: Rara
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX10562781 | ES cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
Rara's Target genes

◢ Rara: Average

◢ SRX018669: ES cells

◣ SRX10562781: ES cells

◢ SRX208055: ES cells

◢ SRX208062: ES cells

◢ SRX520462: F9

◢ SRX520468: F9

◢ SRX520474: F9

◢ SRX520479: F9

◢ SRX3301664: Forelimb

◢ SRX3301665: Forelimb

◢ SRX4369776: Germline stem cells

◢ SRX4369779: Germline stem cells

◢ SRX4369782: Germline stem cells

◢ SRX4369785: Germline stem cells

◢ SRX337439: Liver

◢ SRX018670: mESC derived neural cells

◢ SRX118692: mESC derived neural cells

◢ SRX118693: mESC derived neural cells

◢ SRX675957: Th1 Cells

◢ Rara: STRING

Txndc11
Cldn34d
Tcstv3
Cdv3
Ube2s
Brox
Aida
E030030I06Rik
Xylb
Slc6a16
Cd37
Bcl2a1a
Tomm5
Tmem181a
Rsc1a1
Hoxb13
Dennd2c
Cdk15
Cltc
Rbks
Babam2
Slc15a1
Tmem231
Gabarapl2
Bbs1
Gpx4
Cfap74
Cyp26a1
Mcl1
Enpp4
Xbp1
Crlf2
Dedd
Palb2
Dctn5
Mkrn1
Hivep3
Chchd5
Zc3h12a
Fubp3
Notch4
Tal2
Plbd2
Mafa
Ints3
Cnn3
Fcgr3
Atp11b
Slc29a1
Mymx
Gtf3a
Gm4981
Dux
Tet2
Fitm2
Mobp
Gm3667
Pdgfrb
Cdx1
Psmd3
Asmt
Tmem191c
Adgra2
Mtf2
Bcl2a1b
Dusp9
Rad23a
Calr
Farsa
Camk2n1
Cidea
Cic
Tcp11
Rpl22
Rnf207
Aqp3
Agbl5
Tmbim4
Irak3
Brwd1
Pmepa1
Dppa2
Ccdc171
Exosc6
Atp6v0c
Amdhd2
Lasp1
Hspbp1
Brsk1
Tbl1xr1
Snrpb2
Ccdc120
Exoc2
Srp14
1700067K01Rik
Misp3
Rcor2
Zfp827
Elavl3
Adcy5
S100g
Sugp2
Armc6
Zfhx2
Thtpa
Vmn1r3
Vmn1r2
Ankrd28
Fbxo31
Pomt1
Capns1
Oaz2
Kazn
Dcaf4
Bmerb1
Ncmap
Ifitm7
Denr
Ndufs7
Vamp4
Slc43a1
Marcks
Ubr4
4921517D22Rik
C1qc
C1qa
Snai1
Fcgr1
Tctn1
Cox7a2l
H2-Bl
Hes7
Aloxe3
Tmem125
Frmpd1
Smarca5
Il3ra
Imp4
Ccdc115
Zfp978
Angptl8
Dock6
Sspn
Bcl2a1d
Cdsn
Prss16
Wdtc1
Uqcr11
Mbd3
Gdf15
Rcn3
Ctnna3
Exd1
Chp1
Lefty1
Zfp692
Chrna5
Spen
Nkx2-6
Ttpal
H2ap
H2al3
Arhgap19
Themis2
Pdcd5
Guf1
Ppp2r2d
Mapk1ip1
Zdhhc18
Pom121l2
Zfp740
Csad
Zfp991
Rplp2
Slc25a22
Pidd1
Arrdc3
Baz1b
Mpzl1
Bcat2
Hsd17b14
Trmt2a
Ranbp1
Mok
Zfp839
Plcb4
Itpk1
Nanog
Shf
Hoxb4
Hoxb5
Fbxw4
Zbtb33
Ppdpf
Tmem40
Tnfsfm13
Tnfsf12
Rusc1
Sepsecs
Mdm4
Smyd2
Psma3
Sec22c
Resf1
Btn1a1
Mettl16
Efnb3
Mtnr1a
Spred2
Ube2o
Aanat
Fam131c
Fbxo44
Fbxo2
Fbxo6
Acp6
Jam2
Ercc2
Trim7
Kmt5b
Caln1
Mettl26
Wfikkn1
Mcrip2
Ubxn2a
Atad2b
Phf5a
Aco2
Atp6v0d1
Agrp
Ilf2
Npr1
Rbsn
2610042L04Rik
Ercc6l
Ttk
Plxdc1
Ksr1
Hgsnat
Klf1
Dnase2a
Lmbrd1
Nkap
Itga3
Fam83a
Scn5a
Cyp2w1
Cox19
Cacng6
Ttc24
Iqgap3
Sfi1
Eif4enif1
Tfrc
Septin11
Plcd3
Acbd4
Zfp184
Lama5
Dph2
B4galt2
Atp6v0b
Trim41
Knl1
Nemf
Letmd1
Slc39a4
Ptpdc1
Vps28
Rab11a
Smyd4
Rpa1
Efcc1
1810020O05Rik
Abcc10
Gm3739
Kmt2a
Cenpm
Tspan9
Septin1
Tbc1d10b
Mylpf
Cd209a
Prx
Pomgnt2
Kif2c
Nodal
Scarf1
Rilp
Dpp4
Ttc25
Plekhb1
Aurkb
Smarcc2
Rxfp4
Clcn4
Vps13d
Lamp1
Hrob
Btbd16
Tcirg1
Ndufs8
Thrsp
Nphs1
Kirrel2
Vars
D17H6S56E-5
Ubqln5
Oxnad1
Dph3
H2bc12
H2ac12
Rhobtb1
A930033H14Rik
Mreg
S1pr2
Agpat5
Xpo1
Odc1
Pibf1
Dis3
Foxp1
Nsd1
Zfp982
Rreb1
Tia1
Pcyox1
Gins3
Kat7
Tmem107
Borcs6
Polg
Steap3
Ltbp4
Gm2237
Rex2
Arl4d
Ccdc92b
Cfap126
Camk1
H4c8
Best3
Sit1
Ccdc107
Kcnk5
Gm36210
Mrps15
Ghdc
Hcrt
H3c10
H2bc13
H2ac13
Olfr1359
Gm973
Sycp3
H3c8
H2ac10
Sertad1
Elf1
Wbp4
Txnl4a
Gm16286
Rbfa
4930524B15Rik
Rps29
Lrr1
Rai1
Hoxa1
Nags
Smarcd1
Gpd1
Gm10406
Erdr1
Itga5
Gm13290
Gm13289
Gm13285
Gm13279
Gm13278
Gm13275
Ruvbl2
Gys1
Smyd1
Krcc1
Ifnz
Gm13272
Gm13277
Gm13276
Pspn
Clpp
Alkbh7
Fndc3b
Msi1
Pold2
Zbtb40
Brms1
B4gat1
1700037H04Rik
Icam1
Tnrc18
Kctd5
Phc1
Ide
Acmsd
Eef2k
Gnb2
Mis18bp1
Spc25
G6pc2
Fmc1
Abt1
H4c9
H2bc11
H2ac11
Psmb7
Il17c
Gne
Rarg
Acot7
Gja1
Rwdd2b
Ltn1
Cpsf1
Ccdc113
Ing4
Mdga1
Cacnb3
Znhit3
Unk
H3f3b
Pllp
Ucp2
Pyroxd1
Herc4
Zfp979
Stard6
4930503L19Rik
Cldn14
Tm7sf3
Med21
Sacm1l
Ticrr
Khdrbs1
Tmco2
Smagp
Kdm8
Kank3
Spata33
Chmp1a
U2surp
Ndufb8
Sec31b
Tac4
Usp31
Acp5
Adgre5
Sbno2
Rgl2
Wdr46
Pfdn6
Lag3
Angel2
Megf11
Rps6kc1
Ncor1
Kctd2
Atp5h
Mrpl58
Etfbkmt
Gm525
Dgke
Gipc1
Ptger1
Plcd1
Nipsnap2
Mrps17
Lsm5
Ss18l2
Ppp3ca
Gm13286
Gm13283
Gm13271
Zswim3
Acot8
Zfp809
C1qbp
Trim63
Taf12
Gmeb1
Jund
Iqcn
Tcta
Rhoa
Amt
Lgals9
Srrm3
Ints11
Cptp
Mynn
Actrt3
Hddc2
Nicn1
Tas1r3
Speer4a
Pik3c3
Snx12
Plekha7
H4c12
H2bc15
H2ac15
Daxx
Smim40
Hmgxb4
Tom1
Rnf44
Cdhr2
BC107364
Rab3gap2
Megf8
Tmem145
Rtn4rl1
Dph1
Nek2
Ptprf
Zfp532
Mllt6
Med16
Nupr1l
Zfp523
R3hdm4
Kiss1r
Ap1b1
Mettl25
Ccdc59
Nr6a1
Olfml2a
Sdha
Ccdc127
Taok3
Fam25c
Suds3
Snx18
Insyn1
Hus1b
Cmip
H2-DMa
Eif2b3
Slc35d1
Col9a2
H2-DMb2
Klf2
Mtg2
Myrf
Nkg7
Cldnd2
Abcf3
Lim2
Gm38999
Med14
Fads1
Cyp11a1
Trim2
Abcg2
Gm5796
Epha2
Car6
Etfa
Tekt2
Adprhl2
Fyco1
Xcr1
Snrnp70
C2cd5
Gm19428
Rfc5
Ubc
Sntb2
Ankrd44
Vps35l
Abcb7
Ncam1
Tex14
Pigz
Mib2
2610301B20Rik
Eif4b
Ninj2
Dync1h1
A930018P22Rik
Scube2
Zfp984
Atp2a2
Dok4
Prmt8
Atg7
Ccdc124
Npas4
Gm10354
Twsg1
Gm3752
Zfp553
Prss47
Ncoa7
Slamf8
Nfyb
B3gnt7
Uspl1
Olfr915
Kansl3
Fer1l5
Lipe
Smpdl3b
Mfsd1
Hspb8
Ctdsp2
H2-Q8
H2-Q6
Vps37d
Dnajc30
Bud23
Bcl11b
Mtg1
Rarb
LOC666331
Gm11634
Poldip3
Sgf29
Cyb561d1
Atxn7l2
Srgap1
Kat6b
Tbrg1
Knop1
Iqck
Socs3
Pltp
Dhx32
Pld2
Gm51573
Max
Trim56
Snrpa1
Trim6
Ppp1r15b
Zfp988
Fgd1
Psma2
Mrpl32
Rbm48
Pex1
Smim17
Jarid2
Gm3448
Gm3417
9030025P20Rik
Tle5
Lta4h
Accsl
Gpcpd1
Tti2
Mief1
Blmh
Zfp36
Plekhg2
Ripply2
Cyb5r4
H2-Q9
H2-Q7
Clpb
Plekhg4
Slc39a3
Prdm10
Hagh
Fahd1
Gm7244
Spty2d1
Mtch2
Sh3glb1
Kcnb1
Prdx6
Rap1gap
Snx10
Slc17a7
Pth2
Gfy
Myl9
Ccdc34
Gm3264
Ect2
Grasp
Utp3
Ube2j2
Spink10
Fbxo38
Trim27
Wfdc8
Wfdc6b
Gm21190
Cc2d1a
4930432K21Rik
Fam71e1
Emc10
Twf2
Tvp23b
Eif4e
Speer4e
Ttll3
Fam81a
Tmem116
Erp29
Lman1
Gm20939
Ndufs1
Eef1b2
Telo2
Ptx4
P2rx7
Uri1
Extl1
Gtpbp4
Gpn2
Gpatch3
Adnp
Uqcc2
Ptpmt1
Dcaf10
Gipc2
Septin3
Smdt1
Ndufa6
Wsb2
Poc1b
Galnt4
Irf5
Dcp1a
Onecut3
Aven
Klhl20
Dsg2
Ankrd45
Tyrobp
Rrs1
Adhfe1
Nudt4
Cog6
Ahi1
Caskin1
Abcc4
Cln8
Rnase12
Olfr750
Rasl10b
Sumf2
Mlst8
Bricd5
Pgp
H2aj
Med4
Gm10130
Taf13
Abl1
Fus
Uqcrc1
Trip4
Pclaf
Meiob
Ccdc88b
Gm35549
Saysd1
Ptcd1
Cpsf4
Oas1h
Oas1f
Snrpd3
Gucd1
Spaca6
Rabggtb
Msh4
Cryzl2
Agmat
Usp30
Svop
Muc1
Cnnm2
Bhlha15
Tmem127
Ciao1
Cenps
Rnase4
Ang
Cmc1
Eapp
Trmt61a
Ckb
Gm3005
Trappc9
Crtc1
Gm8764
Gm6763
Gm21312
Gm21304
Gm21293
Gm20765
Ap3s2
Sp8
Srp19
Cdk5rap1
Cstf1
Aurka
Arhgap35
Polr3e
Drg2
Zcchc10
Fam168a
1810010H24Rik
Ceacam16
Znfx1
Med1
Cdk12
Ms4a14
H3c11
H2bc22
H2ac22
H1f5
Serpinf2
AU041133
H4bc24
H2bc23
H2ac24
H2ac23
H4c18
Hspa5
Zfp33b
Mrpl44
Grtp1
Katnal2
Mrs2
Ptprz1
Cct8
Pink1
Mkrn3
Sppl2b
Lsm7
Cacng2
Dpf3
Pdss1
Dpys
Vps29
Rad9b
Chpt1
Zmym4
Zfp948
Tcte3
Gm3435
Zglp1
Olfr142
Atxn2
Ifngr1
Ankle2
Ubac2
N4bp1
Rnf169
Nudt15
Spef1
Get1
1700102P08Rik
Zswim8
Chchd1
Fam32a
Cib3
Fut11
Tcf23
Preb
Dse
Olfr401
4921524J17Rik
Styxl1
Mdh2
Prtg
Tsc1
St3gal3
Man2b2
Dffb
Cep104
Btbd9
Olfr170
Slx1b
Bola2
Coro1a
Tcea1
Pstk
Orc5
Hemk1
6430571L13Rik
2310057M21Rik
Slc10a5
Impa1
Gprc5c
Taco1
Vwa8
Stx12
Secisbp2l
Pcyt1a
Ier2
Exosc8
Alg5
Clptm1l
Rab8a
Gm21663
Bcar1
Cdk5rap2
Fignl1
Trmo
Fbxo9
Cilk1
Pigc
4930558K02Rik
Hspa8
Rnd3
Sema4b
Mrpl39
Psmb2
Gm9758
Fam53c
Cdc25c
Slc9a1
Ptp4a1
Camta1
Ube2f
Pemt
Nectin2
Grm2
Qrich1
Qars
Zfp981
Bglap3
Bglap2
Bglap
Psmd7
Pafah2
Ogfod3
Hexdc
Mif
Cnot2
Ndrg3
Rpl3
Aurkc
Aebp2
H3f3c
Adrm1
Ndufaf1
Sirt4
Rps3a1
Tmed4
Ddx56
Tbc1d14
Mtdh
Oga
Ywhae
Man2c1
Gm21671
Kdm3a
Fbxo46
Bhmg1
Med6
Wdsub1
Gnb4
Dguok
Gabpb1
Ddost
6720489N17Rik
Osbpl1a
Trmt10c
Pcnp
Nsfl1c
Ndufab1
Mrps28
Dars
Gm7762
Ebna1bp2
Cfap57
Syce1
Gadd45b
Wdr77
Atp5pb
Wdr82
Lamc3
Tmem134
Aip
Ambra1
Ncs1
Btbd8
Lpcat2b
Agk
Tmem167b
Mpc1
Gm5458
Mrpl4
Tmem54
Hdac2