ChIP-Atlas: Target genes

Potential target genes for Rara

Query protein: Rara
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX208055 | ES cells
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Rara's Target genes

◢ Rara: Average

◢ SRX018669: ES cells

◢ SRX10562781: ES cells

◣ SRX208055: ES cells

◢ SRX208062: ES cells

◢ SRX520462: F9

◢ SRX520468: F9

◢ SRX520474: F9

◢ SRX520479: F9

◢ SRX3301664: Forelimb

◢ SRX3301665: Forelimb

◢ SRX4369776: Germline stem cells

◢ SRX4369779: Germline stem cells

◢ SRX4369782: Germline stem cells

◢ SRX4369785: Germline stem cells

◢ SRX337439: Liver

◢ SRX018670: mESC derived neural cells

◢ SRX118692: mESC derived neural cells

◢ SRX118693: mESC derived neural cells

◢ SRX675957: Th1 Cells

◢ Rara: STRING

Tcstv3
Txndc11
Greb1
Tex14
H1f3
H2bc8
H2ac8
H3c6
Eapp
H3c2
H2ac4
H4c2
H4c1
H3c1
H3c3
H2bc3
Nkx2-6
H4c3
H1f6
H3c11
H2bc22
H2ac22
H1f5
H1f2
Sfi1
Eif4enif1
BC107364
H3c8
H4c6
H3c7
H2bc9
H2bc4
H2ac6
H2bc12
H2ac12
H4c9
H2bc11
H2ac11
Sspn
H4c14
H3c13
H2bc18
H2bc6
H4c4
H3c4
H2bc7
H2ac7
H4c11
Aldh9a1
Gm3448
Gm3417
9030025P20Rik
H3c10
H2bc13
H2ac13
H2bc14
Il31ra
Arl4d
Ttc39d
Srsf7
H4c8
H2ac10
Tcte3
Gm3435
H2bc1
H2ac1
Mpp7
H1f1
Hexb
Gtf2a1
H4c12
H2bc15
H2ac15
Unk
H3f3b
Zbtb4
Slc35g3
Polr2a
H2aj
H4f16
Ermard
Fcgr4
H4bc24
H2bc23
H2ac24
H2ac23
H4c17
Olfr564
Olfr806
H4c18
H3c15
H3c14
H2ac19
H2ac18
Brox
Aida
Dpagt1
Hmbs
H2ax
Erdr1
Mphosph9
2810006K23Rik
Etfdh
4930579G24Rik
Kpna1
Rps20
Atp1b2
Insig1
Kifap3
Gtf2b
Ubqln5
H2bc21
H2ac21
H2ac20
Ubb
Jund
Iqcn
Taf12
Gmeb1
Gm10710
Dchs2
Csrnp2
Sirt4
Cdkn1a
Errfi1
Sult1b1
Zbtb37
Abhd6
H1f4
Olfr1274
Cerk
Phf3
Fam53c
Cdc25c
Olfr1496
Olfr1495
Tsc22d1
Tmem230
Pcna
Cds2
Wasl
Arid5a
Tas2r123
Vmn2r72
Eif4b
Rcl1
Fancc
Lrrtm4
Poldip3
Oog1
Gm2042
Txndc8
Aplp2
Wiz
Gm29317
Gm28093
Gm21810
Gm21745
Prdx1
Rad23a
Calr
Ing1
Cars2
Lipo3
Slc18b1
Rps12
Cox8c
Taf4
Fmo4
Gadd45a
Fam170a
Hnrnpab
Mybpc3
Pnp
Tomm7
Olfr924
Btg2
Spg11
Rpl3
Syngr1
Fyco1
Rps3
Xcr1
4930486L24Rik
Skp1
Hexim1
Tmem87b
Sgf29
Nufip2
Olfr215
Cd209a
Utp3
Sde2
Tmem129
Tacc3
Slbp
Hectd4
Gm6551
BC147527
Nwd2
Plscr4
Uchl1
Dnah7b
Fus
Ppp1r10
Mrps18b
Atat1
Fam110b
Rnf19b
Serpinb5
Shroom4
Rhox9
Fut8
Arl15
Dlg3
Reg2
Actb
Arl6ip1
Gm28459
Gm21843
Gm21805
LOC666331
Gm11634
Btg1
Klf5
Olfr1154
Txnip
Napepld
Olfr165
Tmprss11d
Hspa5
Olfr1193
Magee2
Nabp1
Dhx8
Sub1
Utp14b
Acsl3
Gm21918
Gm21908
Gm21753
Gm21751
Gm21724
Dtx4
Rab13
Rps27rt
Smc3
Apcs
Jpt1
Rtl8b
Pgk2
Zfp119a
Spin2d
Mtln
Nphp1
Setd4
Cbr1
Ttc8
Rft1
Vmn1r56
Mbtps1
Fig4
Ak9
Rdm1
Calm2
Mat2a
Haus1
Atp5a1
Rack1
Dnajb9
Hsd3b5
2410002F23Rik
Mcl1
Gm525
Taf13
Srsf3
Tmem167b
Smarca5
Dynlt1b
Mylip
Zfp991
Arrdc2
Senp3
Sf3b1
Mpdu1
Eif4a1
Raver1
Rcc1
Cited2
Itpr1
Ccnt1
4930415O20Rik
Slc9a1
Eif4g2
Dgat1
Scrt1
Hoxb13
Kmt5b
Olfr142
Tmem209
Ssmem1
Nubp1
Snrpa
BC024978
Gbp8
Gfpt2
Nbeal2
Ccdc12
Olfr38
Eloc
Cftr
Tmem70
Snx11
Rai2
Tjp2
Hnrnpa2b1
Cbx3
Mre11a
Ankrd49
Hsp90aa1
Ppp1r2
Taf1d
4931406C07Rik
Rpl13
Olfr294
Sap18b
Sap18
Pstk
Olfr1196
Polg2
Ddx5
Cep95
Mrps35
Phf10
Tubb4b
Stpg3
Slc34a3
Fam166a
Gls
Ints6
Gm8765
Olfr470
Ptpa
Crat
Olfr785
Aqr
E030030I06Rik
H2-DMa
Brd2
Dusp1
Rps6
Znfx1
H2az1
Dnajb14
Idh3b
Rpl17
BC031181
Hspa1b
Sf3b5
Dtna
Rplp0
Gcn1
Zfp945
Col6a6
Ccnq
Pate7
Mtf2
Rsph3b
Tmpo
Fgf4
Prpf3
Ccdc86
Gm13057
Gm13040
Fetub
Mak16
Rps5
Rnf225
Rab7b
Taf4b
Aadacl2fm1
Rps28
Ndufa7
Rbm25
Gm10573
Cep43
Lyplal1
Ippk
Sytl3
Calm1
Olfr585
Wsb1
Snrpb
Poli
Tob1
Sertad1
Rabggtb
Msh4
Zfp959
Ms4a20
Rita1
Ddx54
Serbp1
Pcm1
Rps23
Vmn1r149
Vmn1r101
Ctsl
Tkfc
Ddb1
Olfr63
Olfr461
Tmem50a
Syf2
Rsrp1
Mknk2
Gm51425
Gm8165
Nlrp1b
Thoc1
AW209491
Rbmx2
Pdss1
Lsm2
Hspa1l
Hspa1a
B4galt3
Hnrnph1
Rpl9
Lias
Snrpn
Rpl12
Lrsam1
Gm46430
Ubc
Uspl1
Tmem41a
Slc24a1
Ints14
Rps9
Tsen34
Slirp
Nrp
Alkbh1
Ddx11
Olfr834
Olfr982
Ankrd11
Caprin2
Ddx23
Olfr641
Gpx4
Ccnyl1
Srsf6
Psg26
Timm44
Zfp119b
Ebi3
Hmgb2
Zcchc9
Top2a
Rpl3l
Rps2
Rnf151
Ndufb10
Degs1
Cspg4b
Olfr362
Smndc1
Sugp1
Mau2
Cldn34c4
Clca3a2
Ptprr
Crisp2
Gm11213
Pole4
Olfr773
Gtf2f1
Tnrc6c
Tigd2
Kcnab1
Wwox
Vps52
Rps18
B3galt4
Clec4b1
Srsf2
Mfsd11
Mettl23
Teddm1a
Glul
Slc2a1
Upf3a
Otub1
4932438A13Rik
Srsf1
Sgpl1
Depdc7
Sphk2
Spaca4
Rpl18
Fam83e
Drg1
Apc
Sin3b
Hells
Ccdc110
Dars
Ttc17
Zzz3
Dner
Slc38a2
Styxl1
Mdh2
Trmt10c
Pcnp
Arc
Olfr197
Dck
Olfr196
Thap11
Nutf2
Cenpt
Mrpl39
Vmn1r3
AU041133
Efcab14
Nop14
Grk4
Gk5
Rplp2
Slc25a22
Pidd1
Trim17
H3f4
Fos
H2bu2
H2aw
Cabyr
Taar6
Taar7a
Fam43a
Kpna2
Mrpl30
Mitd1
Ergic2
Gtpbp10
Paxip1
Dynll1
Tmem79
Smg5
Sf3b3
Cog4
Arhgap19
Ermp1
1700019D03Rik
Ndufb8
Hif1an
Usp4
Gpx1
Mterf1b
Ywhaq
Zfp207
5730455P16Rik
Tubgcp5
AA467197
Olfr124
Alpk1
Ftl1
Bax
Rpsa
Olfr908
Olfr907
Rhox3e
Rhox2e
Tfrc
Ndufaf3
Impdh2
Dalrd3
Serinc3
AW549877
Ier5l
Map3k7
Ces1g
Rrp15
Il23r
Ss18
Pitrm1
Mterf1a
Rpl8
Commd5
Zc3h13
Snx5
Mgme1
Gm3752
Pmch
Resf1
Klf6
Amd2
Amd1
Matr3
Rpl37a
Olfr1135
Dhx9
Marchf3
Dmxl1
Lsm14a
Ppp1r8
Ociad1
Qrich1
Qars
Vmn1r30
Atf7ip2
Vmn1r204
Rbm39
Mrpl45
Eef1e1
Zfp982
Rpl23
1700001P01Rik
Tmem270
Cldn13
Olfr418
Parpbp
Nup37
Rbmxl2
Aaas
Ier5
Pdhx
Apip
Surf6
Surf2
Surf1
Rpl7a
Med22
Gbe1
Gm3739
Gnb4
Olfr478
Ifna13
Eif3a
Zfp619
Trip4
Pclaf
Pxt1
Kctd20
Rfc3
Rpl15
Nkiras1
Slc3a2
Rps24
Polr3a
Npm1
Surf4
Stkld1
Pfdn2
Nit1
Zfp981
Hnrnpf
Dppa5a
Tm2d1
Vmn1r220
Nop58
Rcn2
Rpl10a
Mrpl35
Immt
Srsf5
Slc25a30
Pik3r3
Hspa4
Denn2b
Hjurp
A730008H23Rik
Map1lc3b
Rbm4b
Tcf15
Caps2
Commd1
Dbr1
Armc8
Setd5
Dtd2
Cct4
Zbed5
Phkg1
Chchd2
Rsrc2
Kntc1
Crygn
Mphosph10
Mcee
Frg1
Selenok
Slc5a6
Cad
Atraid
Rcan2
Tm7sf3
Med21
BC005537
Cdkn2aip
Orc5
Lipo2
Rsph3a
Eif1
Gtf2a2
Clk1
Ctdp1
Puf60
Cisd2
Nsrp1
Gm8126
Mob1b
Ddx20
Rplp1
Seh1l
Psme2b
Olfr109
Mrps28
Zfp978
Topbp1
Ahctf1
9530077C05Rik
Rnps1
Anln
Rnf4
Sgk1
Trp53inp1
Rsph9
Mad2l1bp
Gtpbp2
Usp53
Nat10
Gemin6
Mad2l1
Vmn1r193
Msh6
Kctd5
P4hb
Arhgdia
Urgcp
Enc1
Bclaf1
Rpl7l1
2310039H08Rik
Ptcra
Pigt
Dbndd2
Rbm8a
Dpy19l4
Tmem175
Gak
Wipf2
Ppil4
Rpl21
Selenof
Hs2st1
Trappc6b
Pnn
Pex11b
Xlr3c
Ces2b
4930522H14Rik
Mrpl15
Ptpn6
Grcc10
Mrpl21
Ighmbp2
Hmga1b
Hmga1
AI413582
Gm20822
Ssbp1
Psme4
Tcea1
Slc25a10
Mrpl12
B4galnt2
Creb3l3
Zswim3
Acot8
Gapdh
Map2k2
Tdp2
Acot13
Enox2
Garem1
Mtif2
Tmsb4x
Prame
Kit
Kir3dl2
Tbrg1
Morc3
Pcca
Gcsh
Snip1
Dnali1
Crebzf
Zbtb11
Prx
Sesn2
Zdhhc3
Exosc7
Tnrc6b
Rpl24
Mapk1
Gm2237
Nipa2
Birc6
Prorsd1
Rdh14
Gm11564
Tra2b
Csde1
Sephs2
Phf2
Nprl3
Add3
Rps27l
Hba-x
Thnsl1
Enkur
Otud6b
Slc25a3
Ncoa4
Atf6
Wnk1
Bbs10
Sh2b1
Cep295
Smad4
Tufm
Atp1a1
Vcl
Rps10
Mettl25
Ccdc59
Psmb2
Slc25a2
1700020N15Rik
Pld5
Trmt2a
Ranbp1
Dnajb4
Vmn1r205
Fth1
Nasp
Fubp1
Yeats4
Ppp2r2a
Vcpkmt
Chd9
1700001O22Rik
Cd81
Gclc
Rps7
Yes1
Hspa8
Cdh1
Smurf2
Smtn
Rpl19
Cacnb1
Cfap100
Rpl31
1810009J06Rik
Ptp4a1
Pabpc1
Mapre2
Atg101
Rps13
Rab21
Eef1akmt4-ece2
Eef1akmt4
Alg3
Msra
Smim41
Capsl
Tmem191c
Trpm3
Peli1
Epc1
Scfd1
Pura
Kif20a
Brd8
Dhx30
Zfp11
Ubr3
Nfe2l2
Hpf1
Il18r1
Ddit4
Mthfd2
Fam174c
Cirbp
Wdr83os
Wdr83
Tigar
Tmem183a
Mob1a
Zwilch
Snapc5
Rpl4
Dus4l
Cog5
Gm5741
Dhps
Cdc37l1
Rpl32
Gm2663
Slc14a2
Ube2s
Slc39a4
Cpsf1
Rpl35a
Lmln
Iqcg
Nob1
Mrpl28
4921509C19Rik
Abraxas1
Usp42
Fam204a
Zfp433
Gm32687
Inpp5k
Aars2
Wdr43
Depdc1a
Zcchc17
Snrnp40
Arhgap21
Canx
Hibadh
Eef1akmt2
Abraxas2
Phykpl
Osbpl1a
Mfsd14a
Cpm
Pbrm1
Gm3005
Zfp786
Zfp398
Gtf3c2
Usp16
Gm17660
Tac4
Ptpn2
Bzw2
Ankmy2
Rpl37
Card6
Ppp2r1b
Zfp980
Id1
Mtg1
Gorasp2
Ppan
Angptl6
Mtfr2
Rpl27a
Atp9b
Shfl
Tubgcp6
Hdac10
Oog3
Cox7b2
Psmd7
Naa15
Pradc1
Cct7
Sppl2a
Yif1b
Kcnk6
Nup54
Ndufc1
Pou2f2
2200002D01Rik
Tubb2b
Ier2
Rnf169
Arrdc3
Zfp944
Zfp758
Clcn4
Rpl26
Sik2
Selenos
Med15
Ddx52
Ccnf
Tmx3
Exo5
Myo18a
Tsnaxip1