ChIP-Atlas: Target genes

Potential target genes for Rara

Query protein: Rara
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX208062 | ES cells
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Rara's Target genes

◢ Rara: Average

◢ SRX018669: ES cells

◢ SRX10562781: ES cells

◢ SRX208055: ES cells

◣ SRX208062: ES cells

◢ SRX520462: F9

◢ SRX520468: F9

◢ SRX520474: F9

◢ SRX520479: F9

◢ SRX3301664: Forelimb

◢ SRX3301665: Forelimb

◢ SRX4369776: Germline stem cells

◢ SRX4369779: Germline stem cells

◢ SRX4369782: Germline stem cells

◢ SRX4369785: Germline stem cells

◢ SRX337439: Liver

◢ SRX018670: mESC derived neural cells

◢ SRX118692: mESC derived neural cells

◢ SRX118693: mESC derived neural cells

◢ SRX675957: Th1 Cells

◢ Rara: STRING

Tcstv3
Greb1
Eapp
Tex14
BC107364
H1f3
H2bc8
H2ac8
H3c6
H3c8
H4c6
H3c7
H2bc9
Txndc11
H3c2
H2ac4
H3c3
H2bc3
H1f2
Nkx2-6
H4c2
H4c1
H3c1
H2bc12
H2ac12
H4c9
H2bc11
H2ac11
H4c11
H4c3
H1f6
H3c10
H2bc13
H2ac13
H2bc14
H3c11
H2bc22
H2ac22
H1f5
H2bc6
H4c4
H3c4
H2bc7
H2ac7
Arl4d
Fcgr4
Unk
H3f3b
H2bc4
H2ac6
H4bc24
H2bc23
H2ac24
H2ac23
H4c18
H4c8
H2ac10
Gm3448
Gm3417
Tcte3
Gm3435
Zbtb4
Slc35g3
Polr2a
H4c12
H2bc15
H2ac15
H1f1
H4c14
H3c13
H2bc18
H2bc1
H2ac1
Rdm1
Olfr806
9030025P20Rik
Sspn
Abhd6
H2bc21
H2ac21
H2ac20
H4c17
LOC666331
Gm11634
Taf12
Gmeb1
Ermard
H1f4
Poldip3
Sfi1
Eif4enif1
Dpagt1
Hmbs
H2ax
Gtf2a1
Ttc39d
Srsf7
Taf4
Zbtb37
H2aj
H4f16
Ubb
H3c15
H3c14
H2ac19
H2ac18
Cox8c
Eif4b
Ptpn6
Grcc10
Mpp7
Hexb
Gtf3c6
Sirt4
Tob1
Errfi1
Atp1b2
Setd4
Cbr1
Ing1
Cars2
Srsf2
Mfsd11
Mettl23
Hnrnpab
Ints6
Tmem50a
Syf2
Rsrp1
Mphosph9
2810006K23Rik
Slc18b1
Rps12
Aadacl2fm1
Fam53c
Cdc25c
Ebf1
Il31ra
Rad23a
Calr
Senp3
Mpdu1
Eif4a1
Slc9a1
Jpt1
Npm1
Gtf2f1
Jund
Iqcn
Brox
Aida
Tmem107
Arrdc2
Smc3
Tmprss11d
Csrnp2
Erdr1
Pnp
Eif4g2
BC005537
Wwox
Tex19.1
Klf6
Med1
Cdk12
Cerk
Nabp1
Gfpt2
Rpl27
Ifi35
Rcl1
Olfr564
Kpna1
Sgf29
Rack1
Ifrd1
Ccdc110
Rpl3
Syngr1
Olfr1274
Smarca5
Dhx9
Etfdh
4930579G24Rik
Ccn2
Rpl15
Nkiras1
Magee2
Urgcp
Ubqln5
Nufip2
Hexim1
Ftl1
Bax
Hspa5
Srsf3
Epha4
Psg26
Hsp90ab1
Slc35b2
Ier2
Ier5l
Insig1
Atg4c
Pik3r3
Slc25a4
Sf3b1
Wsb1
Vmn1r56
Trpm3
Tmem230
Pcna
Cds2
Polg2
Ddx5
Cep95
Serpinb5
Tfrc
Sde2
Sult1b1
Plscr4
Mcl1
Gm10710
Dchs2
Rab7b
Zfp119b
Ebi3
Matr3
Arid5a
Shoc2
Bbip1
Smurf2
Gadd45a
Mbtps1
Dhx8
Sqstm1
Rpl6
Rpl13
Tti2
Lsm14a
Nbeal2
Ccdc12
Dnajb9
Rpl23
1700001P01Rik
Zc3h10
Rpl41
Sub1
Btg2
Mrpl39
Gls
Oog1
Gm2042
Taf4b
Nasp
Tmem167b
Spg11
Kansl2
Col6a6
Sytl3
Ncs1
Utp14b
Acsl3
Lyplal1
Pate7
Mat2a
Snrpg
Fam136a
Pecam1
Naca
Hnrnph1
Snrpb
Zfp119a
Tmpo
Fig4
Ak9
Hoxb13
Nme1
Pafah1b1
Caprin2
Pkm
Hspa8
Nop58
Cdc5l
Cldn34c4
Taf13
Taar6
Taar7a
Ddit4
Peli1
Gm6551
Cbx8
Crebzf
Pole4
Snf8
Gip
Hsp90aa1
Rps24
Polr3a
Ptpa
Crat
Olfr197
Pabpc1
Rfng
Gps1
Txn1
Farsa
Trim17
H3f4
H2bu2
H2aw
Kpna2
Hsd3b5
Marchf3
Fus
Rpl9
Lias
Lman1
Srsf1
Eef1e1
Pdhx
Apip
Myo1g
Ppia
Gm3667
Dynll1
Gtf2b
Rpl26
Uhrf1bp1l
Med6
Gm13057
Gm13040
H2-DMa
Brd2
Mknk2
Tsc22d1
Styxl1
Mdh2
Pbk
Fyco1
Xcr1
Hmgb2
Cspg4b
Znfx1
Nxf1
Zfp959
Vmn2r72
Rpl3l
Rps2
Rnf151
Ndufb10
Arc
Tac4
Tmem270
Cldn13
Mre11a
Ankrd49
Olfr908
Olfr907
Mest
Arl6ip1
Sod1
Rnf149
Kat6a
Srrm2
Ksr1
Hjurp
A730008H23Rik
Zfp943
Zfp942
Ttc8
Vmn1r149
Vmn1r101
Wasl
Ap1g1
Denn2b
Amd2
Amd1
Clcn4
Por
Spin2d
Aqp8
Rcc1
Dusp1
Fam174c
Cirbp
Nfat5
Selenot
Thoc1
Gm8765
Rtcb
Tcea1
Cd2
Cabp2
Fam98b
Rps27a
Clhc1
Hpf1
Shank1
Clec11a
Ncl
H2az1
Dnajb14
Myo18a
Ndufaf3
Impdh2
Dalrd3
Rita1
Ddx54
Maml1
Ctnnb1
1700001O22Rik
Rtn4
Ppil4
Zwilch
Snapc5
Rpl4
Pomc
B4galt3
Fam110b
Pigg
Btg1
Psme4
Ints5
Ganab
1810009A15Rik
Uqcc3
Lbhd1
Rps15a
Atp1a1
Wiz
Rps20
Upf3a
Asmt
Aldh9a1
Trim41
Mterf1b
Drg1
Olfr165
Srsf5
Gm17660
Prdx1
Rab42
Olfr1154
Rps26
Snx18
Hgsnat
Tubb4b
Stpg3
Slc34a3
Fam166a
Slc36a1
Tial1
Sp8
Rps6
Dlg3
Shroom4
Zfp36l1
Hnrnpa2b1
Cbx3
Zfand5
Ppp1r15a
Plekha4
Mak16
Fntb
G3bp1
Atox1
Surf6
Surf2
Surf1
Rpl7a
Med22
Olfr1095
Kcnh1
Ier5
Gapdh
1700019D03Rik
Elp5
Ctdnep1
Sertad2
Lrrtm4
Dars
Kifap3
Srp54c
Srp54b
Vcpkmt
Rps8
Dhx30
Rbmx2
Sephs2
Dgat1
Klf2
Cited2
Clu
Rhob
Ulk2
Ahctf1
Tas2r123
Clca3a2
Mtpap
Olfr412
Arrdc3
Traf7
Rab26
Pias4
Eef2
Dapk3
Calm1
Kif2c
Tbrg1
Qrich2
Pts
Cop1
Tmub1
Fastk
Agap3
Cabyr
Canx
Sost
BC147527
Olfr470
Slc14a2
Hoxb4
Hoxb5
Usp4
Gpx1
Tmem79
Smg5
Ubac2
Gm8126
Rcn2
Tuba1c
Ppp1r8
Ube2s
Acly
Cyp17a1
Cdh1
Ppcdc
Zfp619
Timm22
Nxn
Appl1
Cep295
Ankfy1
Rfc3
Fut8
Slc2a1
Prss35
Fmo4
Scfd1
Aqr
Olfr924
Snx5
Mgme1
Ccnt1
4930415O20Rik
Rpl35a
Lmln
Iqcg
Pou5f1
Stmn1
Chmp6
Cltc
Agpat2
Tomm7
Nwd2
Olfr362
Calm2
4930486L24Rik
Dnah7b
Rbbp7
Cd209a
Tnrc6c
Ncoa4
Pex3
Adat2
Ptcd3
Polr1a
Tmem41a
Tma16
Nudt1
Mrm2
Scnn1g
Bclaf1
Pradc1
Cct7
Yeats4
Mex3a
Olfr340
Oxnad1
Dph3
Cep43
Setd5
Sfpq
Rpl19
Cacnb1
Hspa9
Srp68
Galr2
Olfr773
Slc25a3
Srp19
Sf3b5
Ppan
Angptl6
Reg2
Slc5a10
Klf7
Rps3
Zfp945
Lynx1
Nprl3
Zfp991
Ccnq
Ly6d
Olfr142
Hba-x
Zfp981
Cryaa
Rprml
Lyzl6
Gzmk
Mylip
Rnf19b
Ndufb8
Rps3a1
Ptma
Hif1an
Srcap
Spata20
Olfr1496
Olfr1495
Ttc12
Ppp1r10
Mrps18b
Atat1
Adpgk
Nfkbia
Taf1d
4931406C07Rik
Mrs2
Rab33b
Crlf3
Atad5
Itpa
Ddrgk1
Psma4
AY074887
Esr1
Rnaset2b
Idh3b
Rnaset2a
Phf2
Trmt10a
Mttp
Atp6v0a1
Atf2
Rrp15
AA467197
Psmd5
Cutal
Rnf7
Olfr38
Olfr1388
Prame
Mtf2
Fxn
Tra2b
Teddm1a
Glul
Ubr3
Tkfc
Ddb1
Rapgef6
Tsg101
Pcm1
Mrpl35
Immt
Txndc8
Rbm39
Ptpn2
Tigd2
Jade1
Nxph3
Map3k3
Dus4l
Cog5
Pdia3
Catsper2
Recql4
Lrrc14
Olfr1193
Rpl12
Lrsam1
Lrrc24
C030006K11Rik
Ddx52
Rccd1
1600014C23Rik
Kdm4d
Cwc15
Olfr593
Nemf
Trp53inp1
Utp3
Zfp963
Aoc2
Rps7
Sphk2
Spaca4
Rpl18
Fam83e
Add3
Psme3
Prpsap2
Zap70
Crls1
Tcta
Rhoa
Amt
Actb
Dnajb1
Opa1
Cftr
Tdp2
Acot13
Smim7
Rnps1
Tmem80
Deaf1
Ptrhd1
Cenpo
1700020N15Rik
Cbr3
Cdkn2aip
Dusp4
Atf6
Bdh2
Adss
Zfp433
Gm32687
Kansl1
Rtl8b
Rpgrip1
Bcl11b
Hnrnpc
Gm10406
Mybpc3
Arl15
Rplp0
Gcn1
Snrpe
Rpl8
Commd5
Pllp
Mapk1
Arl4c
Tm2d1
Ccdc86
1810009J06Rik
Rspo3
Tm7sf3
Med21
Mterf1a
Usp53
Rps19
Zfp207
5730455P16Rik
Olfr585
Ints12
Gstcd
Dynlt1b
Strap
Zfp143
Skp1
Eif3a
Guk1
Gjc2
Slc39a4
Cpsf1
Ccnyl1
Wdr82
Ythdc1
Snx15
Sac3d1
Hectd4
Ephb3
Gk5
Nek2
Haus1
Atp5a1
Uspl1
Fos
Napepld
Dip2b
Etfrf1
Casc1
Mtln
Taok1
Nphp1
Gps2
Eif5a
Tent5c
Blmh
Rpl17
BC031181
Kctd5
Rps9
Paxip1
Tsen34
Vps52
Rps18
B3galt4
Paip2
Bckdk
Tcf15
AU041133
Ahcyl1
Kat8
Nubp1
Gm29317
Gm28093
Gm21810
Gm21745
Rnf34
Gm28459
Gm21843
Gm21805
Gm21918
Gm21908
Gm21753
Gm21751
Gm21724
Aldh3a2
Carmil1
Zswim3
Acot8
Haus4
Hmga1b
Hmga1
AI413582
Acer2
Ppm1b
Nmt1
Zfp866
Lipo3
Pex12
Sptbn1
Slfn14
Ccna2
Nup62
Il4i1b
Atf5
Slc38a2
Pmf1
Edrf1
Timm17a
Myh10
Olfr418
Rab8a
Spc25
G6pc2
Fasn
Rbm34
Etf1
Cfl1
Zcchc17
Snrnp40
Slc5a5
Rpl18a
Map1s
Ptpru
Mecr
Ergic2
Olfr215
Uchl1
Eef1g
Trappc1
Kcnab3
Cntrob
Zscan21
Gadd45b
Dnaja1
Pcif1
Serbp1
Dbnl
Rpl31
Rptor
Slc25a39
Rsrc2
Kntc1
Slc18a1
Atp6v1b2
Nfib
Zfp654
Cggbp1
Gm34653
Fbxw2
Rps4x
4931414P19Rik
Smc5
Sp2
Mdh1b
Fastkd2
Ska3
Mrpl57
Fancd2
Emc3
Atp6v0c
Amdhd2
Odc1
Fnbp1
Tsen2
Atp1b1
Ube2m
Chmp2a
Mmaa
Ttc17
Mrpl17
Zfp97
Iba57
Pigq
Nhlrc4
Slc25a2
Olfr1196
Olfr63
Mettl14
Plxdc1
Commd1
Tagap1
Foxc2
Mthfsd
Cdc42se2
Polr3gl
Lix1l
Ankrd34a
Nek1
Clcn3
Cct4
Rnasel
Rgs16
Copb2
Olfr322
Olfr320
N6amt1
Smndc1
Set
Pirt
Pfdn2
Nit1
Prr14l
Depdc5
Tmem129
Tacc3
Slbp
Rab13
Rps27rt
Rbm25
Ubap2l
4933434E20Rik
Coq3
Uqcrb
Gm10767
Atxn2l
Nt5m
Cops3
Kat7
Etnk2
Eef1a1
Ren2
Ren1
Mrps28
Pgrmc1
Clec4b1
Chmp5
Bag1
Bbs10
Kifc5b
Rab7
Sertad1
Prdm10
Aplp2
Gm7244
Cpm
Tnrc6b
Ddx3x
Actg1
Gadd45gip1
Gpr31b
Zfp330
Ogfod1
Nudt21
Gosr2
Slc4a11
Irgm1
Pir
Txnip
Gtf2a2
Kifc3
Snrnp70