ChIP-Atlas: Target genes

Potential target genes for Rara

Query protein: Rara
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX337439 | Liver
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
Rara's Target genes

◢ Rara: Average

◢ SRX018669: ES cells

◢ SRX10562781: ES cells

◢ SRX208055: ES cells

◢ SRX208062: ES cells

◢ SRX520462: F9

◢ SRX520468: F9

◢ SRX520474: F9

◢ SRX520479: F9

◢ SRX3301664: Forelimb

◢ SRX3301665: Forelimb

◢ SRX4369776: Germline stem cells

◢ SRX4369779: Germline stem cells

◢ SRX4369782: Germline stem cells

◢ SRX4369785: Germline stem cells

◣ SRX337439: Liver

◢ SRX018670: mESC derived neural cells

◢ SRX118692: mESC derived neural cells

◢ SRX118693: mESC derived neural cells

◢ SRX675957: Th1 Cells

◢ Rara: STRING

Tcstv3
H4c3
H1f6
Arl4d
Prdx2
Junb
Ttc39d
Srsf7
Hspa8
H2bc6
H4c4
H3c4
H2bc7
H2ac7
Unk
H3f3b
Zbtb4
Slc35g3
Polr2a
Rdm1
Ing1
Cars2
Jund
Iqcn
Arrdc2
H3c15
H3c14
H2ac19
H2ac18
Nabp1
Btg2
P4ha1
LOC666331
Gm11634
Taf13
Tmem167b
Txndc11
Mafb
Eapp
Tmem50a
Syf2
Rsrp1
Calm2
Srsf5
Tob1
Clu
Ints6
Rnaset2b
Arid5a
Greb1
Dgat2
Rad23a
Calr
Farsa
Rnaset2a
Ddit4
Rab37
Slc9a3r1
Usp4
Gpx1
Eif4b
Mybpc3
H2bc21
H2ac21
H2ac20
Atp1a1
Hsp90aa1
Calm1
Hspa5
Dpagt1
Hmbs
H2ax
Tuba4a
Stk16
Glb1l
A630095N17Rik
Epha2
Clic4
Utp14b
Acsl3
Hexim1
Mphosph9
2810006K23Rik
Ier2
Man1a
Zfp36l1
Rpl3
Syngr1
Sde2
Hhex
Vcl
Vegfa
Raf1
Taf4
H4bc24
H2bc23
H2ac24
H2ac23
H4c18
Klf6
Dnajb9
Irs2
Nufip2
Znfx1
Cebpd
Hnrnpab
H1f4
H2-DMa
Brd2
Tex14
Cited2
Ttc41
Hsp90b1
Ipmk
Cisd1
Jun
Mertk
Fam53c
Cdc25c
Cebpa
Hsp90ab1
Slc35b2
Ubb
Pus1
Ep400
Actb
Trp53inp1
Ctsl
Tubb4b
Stpg3
Slc34a3
Fam166a
Sub1
Ppp1r3c
Rnd3
Ndufaf3
Impdh2
Dalrd3
Tob2
P4hb
Arhgdia
Rnf103
Zbtb37
Rhob
Frmd6
Socs3
Eef1a1
Rnf19b
Zfand5
Aplp2
H2bc12
H2ac12
H4c9
H2bc11
H2ac11
Slc9a1
BC005537
Fus
Unc5b
Mknk2
Amd2
Amd1
Rcc1
Sephs2
Id3
Slc38a2
Klf7
Vamp1
Plk2
Rhou
Ttc23
Lrrc28
Irf8
Kpna1
H4c14
H3c13
H2bc18
Idh3b
Rsph9
Mad2l1bp
Gtpbp2
Acly
Susd6
Whamm
Fsd2
Dnaja1
H2aj
H4f16
Mat2a
Sspn
Ier5
Acy3
Tbx10
H4c17
Kdm4c
Hs3st3b1
Fdx1
Ell2
Herc2
Mapkapk2
Shld2
Glud1
Hnrnpa2b1
Cbx3
Rplp2
Snrpe
Ndel1
Cracr2b
Slc35f6
Sesn2
Idi1
Klhl21
Rab43
Nudt4
Ifrd1
Irak2
Traf7
Rab26
Eif4g2
Wsb1
Slc31a1
Fkbp15
Sirt1
Fos
Gtf2a1
Tsc22d2
Hjurp
A730008H23Rik
Gadd45a
Sf3b1
Sqstm1
Slc25a3
Cebpb
Marchf3
Tcta
Rhoa
Amt
Gtf2b
Neu1
Insig1
Tctex1d4
Plk3
Btbd19
H3c2
H2ac4
H4c2
H4c1
H3c1
H1f1
Prdx1
Tnrc6c
Id2
Maml1
Hspb8
Lag3
Trf
Ifi27
Ddx24
Nr3c2
H3c8
H4c8
H2ac10
Klf10
Ncoa3
Ctnnb1
Nfkbia
Ugdh
Mcl1
Phf2
Ncl
Adk
Csrnp2
Arvcf
Nfkbiz
Tango2
Srsf2
Mfsd11
Mettl23
Btg1
Gapdh
Selenop
Ube2h
Acer3
Pdia4
D230025D16Rik
Pdia3
Catsper2
Arl15
Cd81
Peli1
Plec
Ftl1
Bax
Fasn
Jpt1
Skida1
Mllt10
Fzd5
Jak1
Gpat4
Srsf3
Cyp2d10
Rab42
Rnd1
Lgr4
Dhx8
Msmo1
Taf12
Gmeb1
Mtarc2
Myo6
Igfbp4
Ppp1r14b
LOC114841036
Fkbp2
Vegfb
Pcf11
Luzp1
Baiap2
B2m
Tpcn1
Iqcd
Olfr806
Tmem129
Tacc3
Slbp
Arl6ip1
Med23
Ppp1r10
Mrps18b
Atat1
Ccnyl1
Sec22c
Gpcpd1
Ern1
Raph1
Cat
Slc25a30
Gtf2f1
Gclc
Atf3
Ppp1r15a
Plekha4
Kctd12
Senp3
Dusp1
Mpdu1
Eif4a1
H4c6
H3c7
H2bc9
Tat
Acer2
Herpud1
Haus1
Atp5a1
Psmb10
Lcat
Ctrl
H2-K1
Teddm1a
Glul
Tra2b
Smc3
Sympk
Foxo3
Gfod1
Foxa3
Fam214a
Sap18b
Sap18
Csrnp1
Cyb5a
Snrk
Mterf1a
Flnb
Cdo1
H3c3
H2bc3
H1f2
Rbm14
Gm21992
Zfp36l2
Slc16a10
Polg2
Ddx5
Cep95
Sc5d
Dnajb1
Sorbs1
Slc5a3
Mrps6
Ccdc9
Stat2
Apof
Tsc22d1
Zbed5
Phkg1
Chchd2
Slc26a8
Mapk14
H3f3a
Fam174c
Cirbp
Degs1
Ttc7
F2r
Mbd6
Ddit3
Snai1
Kctd5
Snx18
Ppp1r2
Ass1
Angptl4
Adpgk
Hexb
Adap2
Creld1
Selenbp2
Pdlim5
Jarid2
Net1
Trappc3
Map7d1
Dbi
3110009E18Rik
Foxq1
Dmxl1
Mterf1b
Isoc2a
Actn4
Skp1
Dnajb4
Dnajc3
Ddost
Zfp36
Plekhg2
Stard5
Parp10
Grina
Etnk2
Ren2
Ren1
Rfng
Gps1
Hmga1b
Hmga1
AI413582
Dusp6
Scarb1
Stra8
Ankrd11
Tmem230
Pcna
Cds2
Pabpc1
Nrd1
Slc30a9
Scp2
Actg1
Ulk1
Rbm4b
Atp5g3
Plpp1
Cotl1
Ddx3x
Ahcy
Ankrd39
Hnrnph1
Tcf23
Preb
Abhd1
Fth1
Lipg
Kcnk5
Spout1
Endog
Cry2
Mrpl1
Tmc5
Mtfr1
Kmt5b
Hsph1
Ost4
Emilin1
Jup
Map2k1
Ankrd37
Dync1h1
Oxtr
Tle1
Spg11
Osgin1
Necab2
Gadd45g
Ptprk
Arhgap29
Hspa1b
Tdo2
Wdr83os
Wdr83
Tpi1
Spsb2
Man2b1
Ripk2
Pdk2
Ostc
Cpeb2
Trp53i13
Abhd15
Myo18a
Atp2a2
Itpr1
Rbbp6
Txn1
Dip2b
Atl2
Dynll2
Olfr855
Olfr854
Rtn3
Pygl
Fech
Larp1b
Nedd9
Zfp963
Cap1
Slc6a9
Gramd1b
Map2k4
Ggcx
Dnajc1
Cldn3
Ptms
Rsrc2
Kntc1
Glce
H1f3
H2bc8
H2ac8
H3c6
Glrx5
Psmd12
Pitpnc1
Paxip1
Pdcd4
Gnb1
Xylb
Lnp1
Bsg
Hdlbp
H4c11
Tnfrsf1b
Pnp
Dhcr24
Bahcc1
Mafk
Abca1
Ccdc117
Ero1b
Foxo1
Rnf38
Nkx2-6
Sptan1
Irf6
Lrrc8a
Iffo2
Pcif1
Daam1
Alcam
Il31ra
Mapk8
Slc27a2
Hao1
Clec2d
Crot
Fn1
Znrf2
Macrod1
Tnrc6b
Ulk2
Tiparp
Pik3c2a
Pdhb
Zer1
Tbc1d13
Plcb1
Pikfyve
Idh1
Acap2
Abtb2
Serinc3
Hif1a
Dus1l
Wbp1
Ino80b
Slc6a4
Mrpl53
Mogs
Litaf
Lsm2
Hspa1l
Hspa1a
Slc66a1
Akr7a5
Acad12
Edem1
Zfp568
Erf
Smad7
Pik3r1
Map4k5
Atl1
Dhx9
Kdelr2
Sirt4
Atg4d
Slc20a1
Nt5dc3
Slc17a7
Tuba1c
Pih1d1
Aldh16a1
Hmgcs2
Crym
Abca14
Prss35
4833420G17Rik
Creld2
Alg12
Cpm
Lifr
Tpt1
Sgk1
Aadacl2fm1
Zswim3
Acot8
Tmem205
Rab3d
Ccdc159
Tarbp2
Map3k12
Npff
Farp2
Plppr2
Apob
Akap8l
Etv5
Ctbs
Rps15
Apc2
Ubr2
Stx16
Ptpn1
Ces1c
Cep43
Jag1
Gpt2
Ephx2
Hmox2
Eif3a
Nadsyn1
Dhcr7
Nmral1
Esyt2
Fam207a
Azin1
Fads2
Zfp341
Pxmp4
Sh3bp2
Tgm2
Gch1
Hbegf
Pdlim7
Ppp4c
Aldoa
Cpt2
Serpine1
Pkd1
Pdhx
Apip
Hacd2
Sec61a2
Fmo5
Dnajb2
Gadd45b
Selenok
Actr8
Nfam1
Slc50a1
Efna1
Baz2a
Atp5b
Pim3
Wwox
Mrpl44
Baiap2l1
Chordc1
Stat3
Csrp2
Lbh
Sertad2
Slc26a2
Pde6a
Rab5b
Pmel
Cdk2
Usp42
Pcx
Itch
Wdr3
Camk2n1
Pgrmc1
Rfk
Fam20c
Ubxn6
Ptk2b
Pklr
Hdgfl2
Epc1
Klf2
Mavs
Cstf2t
Srp9
Errfi1
Gnai2
Otud3
Cpsf4l
Txnl1
Chka
Mcidas
Ccno
Ppia
Alg1
Mxd4
Aadacl2fm3
Hgsnat
Nsrp1
Nme1
Urgcp
Gstp2
Gstp1
Surf6
Surf2
Surf1
Rpl7a
Med22
Bach1
Ero1a
Retsat
Elmod3
Raly
R3hdm4
Kiss1r
Arid3a
Pkn2
Rbm15b
Manf
Tmbim6
Rpl38
Ttyh2
Adora1
Sec22b
Ncoa4
Nars
Pias4
Eef2
Dapk3
Tle4
Drg2
Slc25a33
C3
Dlc1
Pdia6
Cldn11
Creb3l3
Map2k2
Nxt1
Gzf1
Tfrc
Fam131c
Rps6
Trim25
Ssbp1
Arl4c
Onecut2
Scnn1g
Bms1
Trabd
Mbtps1
Etfrf1
Casc1
Ivd
Styxl1
Mdh2
Pank2
Acsl1
Sh3glb1
Plpp3
Aldh2
Abcb10
Srp19
Hnrnpa0
Kyat1
Cyp27a1
Deptor
Srsf4
Fam53a
Tex45
Pex11g
Kmo
Fh1
Tti2
H2-Q10
Top1
Zyx
Pi4k2a
Morn4
Fkbp4
Napepld
Ptma
Mtnr1a
Amacr
Mtr
Selenos
Zranb1
Slc25a22
Pidd1
Ctdp1
Slc24a3
Gm15517
Acp4
Cend1
Sertad1
Fgfr3
Abhd6
Cerk
Ppdpf
Paip2
Hmox1
Dlgap4
Txnip
Rab33b
Ddx10
Rabgef1
Tmem199
Sebox
Poldip2
Psap
Il17b
Arrdc3
Rpl3l
Mapk1
Rapgef6
Scgb1a1
Msrb1
Pnrc1
Rcbtb1
Mfsd14a
Cdc42
H2-L
H2-D1
Ints8
Serpina1b
Kif1c
Inca1
Icam1
Ppp2r5d
Xrra1
Spcs2
Them7
Aldob
H2bc4
H2ac6
Tmem60
Phtf2
Smtn
Rhpn2
Hmgcl
Fbrsl1
Mpc2
Dcaf6
Mylip
Eif1
Shb
Tgoln2
Tgoln1
Klhl24
Phyh
Slc14a2
Gpx4
Coro1b
Gpr152
Cabp4
Ptprcap
Fra10ac1
Prodh
Ndfip1
Grhpr
Rsph3b
Nfyb
Abcd3
Eprs
Mrpl39
Diaph1
Tmem107
Gtf3c6
Plcd3
Acbd4
Slc18a1
Atp6v1b2
Dnm2
Evi5
H4c12
H2bc15
H2ac15
Spry4
Atp10d
Safb2
Safb
Fam222a
1700067K01Rik
Npb
Sirt7
Pcyt2
Becn1
Zbtb8os
Rbbp4
Smad1
Samd1
Sp8
Sod1
Tpst1
Hmgcs1
Dtwd2
Sp1
Efnb1
Als2
Klf3
Hagh
Fahd1
Eif4ebp2
Arih1
Tbxas1
Ubxn2a
Atad2b
Uqcr11
Mbd3
Ell3
Snx22
Ppib
Serinc4
Serf2
Hypk
Sned1
Hykk
Ncor1
Slc12a7
Selenbp1
Pigl
Dstn
Gjb2
Echdc3
Slc3a2
Ssh2
Slc38a3
Rpl22l1
Baz1a
Uspl1
1700001O22Rik
Rps2
Rnf151
Ndufb10
Fzd7
Hmgcr
1810013L24Rik
Ccin
Map1lc3b
Map3k9
Tmem126a
Maf
Gucy2d
Rplp0
Gcn1
Slc25a11
Rnf167
Pfn1
Eno3
Slc39a4
Cpsf1
Ets1
Lactb
Pnpla8
Hook2
Zfp526
Dedd2
A130010J15Rik
Agtr1a