ChIP-Atlas: Target genes

Potential target genes for Rara

Query protein: Rara
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX118692 | mESC derived neural cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Rara's Target genes

◢ Rara: Average

◢ SRX018669: ES cells

◢ SRX10562781: ES cells

◢ SRX208055: ES cells

◢ SRX208062: ES cells

◢ SRX520462: F9

◢ SRX520468: F9

◢ SRX520474: F9

◢ SRX520479: F9

◢ SRX3301664: Forelimb

◢ SRX3301665: Forelimb

◢ SRX4369776: Germline stem cells

◢ SRX4369779: Germline stem cells

◢ SRX4369782: Germline stem cells

◢ SRX4369785: Germline stem cells

◢ SRX337439: Liver

◢ SRX018670: mESC derived neural cells

◣ SRX118692: mESC derived neural cells

◢ SRX118693: mESC derived neural cells

◢ SRX675957: Th1 Cells

◢ Rara: STRING

Tcstv3
Adgra2
Cldn34d
Hivep3
Cdv3
Tmem181a
Greb1
Rsc1a1
Ube2s
Adgre5
Notch4
Dennd2c
Fubp3
Socs3
Pdgfrb
Cdx1
Srp14
Xylb
Brox
Aida
Tomm5
Cmip
Ccdc92b
Tet2
Plbd2
Mafa
Mkrn1
Slc6a16
Cd37
Fitm2
Oxnad1
Dph3
Tcp11
Mreg
Btbd16
Ints3
Gpx4
Mcl1
Ect2
Zfhx2
Thtpa
Oaz2
Lag3
Adcy5
Ncmap
Hoxb13
Zdhhc18
Bbs1
Cidea
Xbp1
Fndc3b
Aqp3
Itga5
Slc43a1
Tal2
Olfr806
1700037H04Rik
Itga3
Camk2n1
Cnn3
Brwd1
Bcat2
Hsd17b14
Abhd6
Tmem231
Gabarapl2
Kcnk5
Mobp
Wwox
Nphs1
Kirrel2
Kazn
Pmepa1
Tm7sf3
Med21
Fbxo44
Fbxo2
Fbxo6
Ksr1
Hrob
Zfp740
Csad
Xpo1
Cdk15
Gstp2
Gstp1
Baz1b
Plekha7
Tbl1xr1
Srrm3
Thrsp
Wdtc1
Bmerb1
Ifitm7
Uri1
Tm2d2
Adam9
Nkg7
Cldnd2
Lim2
Gm38999
Capns1
Tmem63c
Slc7a15
Icam1
Rplp2
Slc25a22
Pidd1
Fbxw4
Mettl16
Cic
Rusc1
E030030I06Rik
Mtnr1a
Agpat5
Spc25
G6pc2
Prdm14
Dcaf4
Bcar1
Vmn2r102
Ndufb8
Sec31b
Setd4
Cbr1
Grtp1
Gtpbp4
Hoxa1
Enpp4
Ttpal
Mtg2
Caln1
Rarg
Ube2o
Aanat
Dhrs3
Lasp1
Gpcpd1
Rad23a
Calr
Farsa
Kpna1
Aadacl2fm1
Zfp532
Hexb
Cyp26a1
Slc15a1
Dppa2
Cfap74
Abcf3
Snai1
Tnfsfm13
Tnfsf12
Mis18bp1
Car6
Tmed10
Mmgt2
Lrrc75a
Efnb3
Tmem191c
Nodal
Tle5
Abl1
Mmp9
Insyn1
Il17c
Pigz
Nkx2-6
Atp6v0d1
Agrp
Psma6
Psmb7
Atp2a2
S1pr2
Mtf2
Acot7
Hspbp1
Brsk1
Prc1
Slc10a5
Impa1
Oasl1
Megf8
Dsg2
Tmem145
Abr
Ppp3ca
Ttll3
Zfyve28
Cfap99
Blmh
Ankrd44
Rbks
Babam2
Plekhb1
Prss27
Smyd2
Thap4
Tmem127
Ciao1
Spred2
Tmco2
Poc1b
Galnt4
Rxfp4
Kat7
Mok
Msi1
Mib2
Ccdc80
Galnt2
Irf1
Slc4a1
Rreb1
Esr1
Dusp9
H2-Bl
Msgn1
Nme1
Mdga1
Hbegf
Slc4a9
Gm973
Tmem165
Plxdc1
Letmd1
Trim7
Cnot8
Zfp827
Serpinf2
Spty2d1
Pik3ip1
Trmt1
Nacc1
Megf11
Resf1
Krt79
Ino80c
Ryr1
Dock1
Sepsecs
H2ap
H2al3
Prmt8
Kank3
Dedd
Cox7a2l
Pbld2
Hnrnph3
Hspb8
Smagp
Rcc1
Tecpr1
Camk1
Tatdn2
Rhox11
Atg14
Pspn
Clpp
Alkbh7
Txndc11
Gm525
Dgke
Dnase2b
Usp28
Evi5
Csf2ra
Crtap
Shld1
Tctn1
Gadd45b
Col9a2
Pdlim1
Znrf1
Wdr59
Prdm10
Il3ra
Gm7244
Srsf1
Tyrobp
Stk33
Acp6
Cnnm2
Vps37d
Dnajc30
Bud23
Gzmk
Gprc5c
Cspg5
Bmt2
Fam131c
Smim38
Pibf1
Dis3
Fxn
Zbtb34
Mmp11
Gm867
Chchd10
Vars
D17H6S56E-5
Septin11
Nek2
Ube3c
Ccdc33
Rusc2
Sct
Drd4
Znfx1
Myrf
2410137M14Rik
Znrd1as
Olfr352
Sec22c
Ppdpf
Elavl3
Ss18l2
Lefty1
Phc1
Capn3
Klhl20
Ankrd45
Prdx6
Egr4
Atp11b
C1qc
C1qa
Sertad2
Jund
Iqcn
Nudt1
Pld2
Capza2
Itpk1
Zcchc10
Gm36210
Ptprf
Cpt1a
Rnf19b
Med14
Amacr
Acp5
Ticrr
Ankrd28
Ago2
Eif4h
Fam160b1
Bcl2a1d
Dse
Nudt4
Map7
Ccdc102a
Adgrg5
Angptl8
Dock6
Tex14
Rhobtb3
Slc14a2
Dop1b
Slc22a21
Gga1
Ucp2
Trim17
H3f4
Tnnt1
Tnni3
Ilrun
Ppfia1
Ccdc120
Ppp1r15b
Epp13
Tmem116
Erp29
Msh6
Gipc1
Ptger1
Ruvbl2
Gys1
Ubr4
Pif1
Ifngr1
Plcd1
Best3
Aebp2
Sympk
Foxa3
Zfp316
St6galnac2
Cyp11a1
Nsd1
Cfl2
Psmd7
Spen
Twf2
4921507P07Rik
Phf5a
Aco2
Efcc1
1810020O05Rik
Slc39a7
Rxrb
H2-Ke6
Col11a2
Kdm6b
Lrrc2
Psmg4
Zfp438
Crlf2
Marcks
4921517D22Rik
Zyg11a
Nupr1l
Trpm3
Kdm3b
Dpp4
Jup
Rnf13
Golga7
1700067K01Rik
Misp3
Pyroxd1
Men1
Map4k2
Pcsk1n
Eras
Mllt6
Zfp839
Katnal2
Boc
Angel2
Rps6kc1
Pcdh20
Lipe
Stk35
Nnmt
Nectin2
Sp8
1810010H24Rik
Vwa8
Slc29a1
Mymx
Rfc5
Ide
Ghdc
Hcrt
Zbtb7a
Sgk1
Fam20c
Ank1
Septin4
Cdsn
Cox7a1
Trim56
Gabbr1
Vps35l
Dag1
Hspb7
Clcnkb
Rnf216
Ctsb
Fads1
Pla2g10
Clgn
Rnf213
Coa7
Agpat3
Scyl1
Otof
Fam166c
Tmem64
Nfyb
Pold2
Tnrc18
Jarid2
Gpr20
Agpat2
Irf5
Wnt2b
Kcnk4
Gpr137
Bad
Catsperz
Tmem184b
Llgl2
Fbxo46
Bhmg1
Zfp523
Erich3
Ggt6
Trex1
Shisa5
Il31ra
Rfx2
Colca2
Hoxc4
Olfm1
Rasl10b
Gipc2
Bcl2a1a
Lman1
St6galnac6
Muc1
Zfp988
Syne1
Prss50
Prss46
Arhgap19
Srgn
Bcl11b
Zfp143
Cfap161
Map1b
Ltbp3
Slc25a36
Fam171b
Ahi1
Zp3
Ssc4d
Ubxn2a
Atad2b
Smarca5
Kcnh3
Sema4g
Itch
Rnf125
Hmgxb4
Tom1
Gm3558
S100g
Usp45
Tstd3
Dcp2
Ctsd
Ccdc34
Vmn2r22
Kng2
Rnf169
Cmc1
Ttc24
Iqgap3
Wsb2
Plekha8
Fkbp14
Tspan17
Eif4e1b
Dlgap3
Spata33
Chmp1a
Gca
Rab5c
Sin3a
Phc2
Rpl27
Gabpa
Atp5j
Spint4
Ptprs
Plekhf2
Cltb
Slc25a13
Ptgir
Slc12a7
Sycp3
H2-Q8
H2-Q6
Trpv3
Tent5c
Arf4
Arfgef2
Crybb1
Cryba4
Adora2a
Sbno2
Cacng6
Ptpmt1
Rgl2
Wdr46
Pfdn6
Bcl2a1b
Ninj2
Uqcrc1
Icosl
Arhgap35
Stat4
Twsg1
Pltp
Prss52
Prss51
Setmar
Rasa4
Sytl1
Scn5a
Rarb
Psmd12
Pitpnc1
Slc17a7
Pth2
Gfy
Wdr6
Cdc42ep3
Abcg4
Stra8
Wdr91
Slx1b
Bola2
Ttc7b
Coro1a
Doc2b
Abcc5
Meiob
Gm45915
Uck1
Trmt61a
Ckb
Smyd1
Krcc1
Zbtb25
Zbtb1
Eif2b3
Smyd4
Rpa1
Nol11
Ncapd2
Mrpl51
Zfp707
Ccdc166
Foxp1
Tmem51
Chrna5
Taf13
Dcaf12
Mrs2
Hddc2
Arih2
Slc25a20
Foxa1
Ncor1
Ankrd39
Pbx2
Gpsm3
Ankrd23
Myl9
Fem1c
Extl1
Pcmtd1
Lrmp
Adnp
Gm16381
Rab37
Tmem60
Phtf2
Trim67
Tmem211
Ggact
Pml
Gm5796
Rab10
Tafa4
Rsph3b
Zfp710
Mtch2
Rnaseh1
Lyg2
Osbpl1a
Spata25
Neurl2
Ctsa
Zswim1
Tfrc
Txnip
Lrrc10b
Tmem205
Rab3d
Ccdc159
Bhlha15
Arl6ip5
Uba3
Olfr222
Spire2
Pin1
Ceacam16
Fbxo17
Hus1b
Cox8c
Zfp979
Etnk2
Sirt3
Psmd13
Pdcl3
Zfp600
Hck
Stk11
Creld1
Nr6a1
Olfml2a
Gatad2a
H2-Q9
H2-Q7
Tuba1b
Slc28a1
Akap7
2510009E07Rik
B3gnt7
Zfp148
Trim26
Fbxo15
Tsc22d4
Nyap1
Gpa33
Dusp27
Slc2a9
Tspan9
Zfp985
Tdgf1
P2rx1
Grasp
Jam2
Gm20939
Zdbf2
Cdc42ep1
Lgals2
Tet1
Gpr1
Fem1al
Rtp2
Ube2l6
Cd209a
Rita1
Ddx54
Arhgef10
Mrpl37
Cyb5rl
Fam71e1
Emc10
Ptcd3
Polr1a
Gcnt2
Tmeff1
Sub1
Dennd10
Jmy
Myo1b
Heyl
Nat8f2
Slamf8
Slit3
Ammecr1l
D830030K20Rik
Zfp787
Ccin
Tefm
Dhx32
Itpr1
Tcf7l2
Stra6
Zscan4c
Ap3s2
Tmem135
Kat6b
Slc25a51
Ado
Septin1
Zfp553
Islr2
Pcnt
2610028H24Rik
Agtrap
Smim20
Phrf1
Calr4
Pdss1
Pmaip1
Slc35g2
Slc39a2
Erf
Zfp280b
Gtf3a
Zscan4f
Mroh6
Cacnb3
Satb1
Gpr157
Rara
Cystm1
Phldb3
Chd9
Myo1g
Rpgrip1
Ripply2
Cyb5r4
Sall2
Col27a1
Adamts15
Zfp980
Ppp2r5e
Dhcr24
Dppa5a
Gm3696
Grip2
Srgap3
Tcirg1
Ndufs8
Asap3
Zfp990
Nup205
Proc
Rwdd2b
Ltn1
U2surp
Spag9
Rhoc
Fhad1
Dysf
Trem2
Ptges
B230307C23Rik
Prelid3b
Atp5e
Cln8
Abhd17c
Asmt
Fzd5
Ppm1b
Sncg
Bik
Mmrn2
Ccdc171
Phf11d
Actn4
Oas1g
Alpl
Cnot4
Rpl17
BC031181
Srrm1
Gm12169
Mbd6
Ddit3
Sema4d
Ifna13
Aldh9a1
Dnah7b
Hps5
Gtf2h1
Serpinh1
Daxx
Smim40
Cdk1
Chpt1
Tomm40
Ffar3
Sema5b
Oprk1
Edn1
Spef1
Bcan
Lrrk2
I830077J02Rik
Taf4
Uqcr11
Mbd3
Cxxc5
Hoxb4
Hoxb5
Abcc4
Gm19428
Ooep
Hpse
Yap1
Tln1
Creb3
Upp1
Pgbd5
Slc38a4
Ptar1
Guf1
Pick1
Rock2
Ccdc88b
Disc1
Ldc1
Zc3h12a
Anxa11
Spp1
Crybg2
Cldn14
Sspn
Ier2
Rbpj
Glis2
Siah3
Zswim3
Acot8
Arvcf
Tmem79
Smg5
Fam170b
Sstr3
Rbp7
Fanci
Ttc25
Ptpdc1
Suclg2
Apobec2
Vsir
Porcn
Fam32a
Cib3
Tmco6
Tbcel
Fgr
Cdc42bpb
Ndufa2
Ik
Hmgcl
Cfap20dc
Acmsd
Wfdc3
Dnttip1
Il16
Exosc8
Alg5
Tacc1
Ptch2
Ftmt
Plet1
Golga7b
Calhm6
Lmbrd1
Igfbp2
Pou5f1
Aldoart2
Tcf19
Cchcr1
Acacb
Hjurp
A730008H23Rik
Rai1
Chchd5
Smim8
Ppp2r2d
Ubap1
Mapk1ip1
St6gal1
Oas1h
Oas1f
Nags
Slc26a2
Pde6a
Smarcd1
Pld3
2310022A10Rik
Mcrs1
Hsp90aa1
Tmem235
Eif4ebp2
Kifc3
Abhd11
Tfr2
Prrt3
Foxn4
Hmg20b
Zfp819
Lcor
Gipc3
Maats1
Cox17
Timp3
BC028528
Ciart
Aph1a
Sftpc
Bmp1
Zfp112
Gdf1
Cers1
Otop2
Ush1g
Homer3
Spaca6
Otop3
Pcyox1l
Mdfi
Pnpla5
Tctex1d4
Plk3
Btbd19
Car5a
Prr5
Ubac2
Lyrm1
Dcun1d3
Srcap
Tnfrsf19
P4htm
Fam25c
Fam81a
Traf3ip2
Sik3
Pafah1b2