ChIP-Atlas: Target genes

Potential target genes for Rara

Query protein: Rara
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX520474 | F9
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
Rara's Target genes

◢ Rara: Average

◢ SRX018669: ES cells

◢ SRX10562781: ES cells

◢ SRX208055: ES cells

◢ SRX208062: ES cells

◢ SRX520462: F9

◢ SRX520468: F9

◣ SRX520474: F9

◢ SRX520479: F9

◢ SRX3301664: Forelimb

◢ SRX3301665: Forelimb

◢ SRX4369776: Germline stem cells

◢ SRX4369779: Germline stem cells

◢ SRX4369782: Germline stem cells

◢ SRX4369785: Germline stem cells

◢ SRX337439: Liver

◢ SRX018670: mESC derived neural cells

◢ SRX118692: mESC derived neural cells

◢ SRX118693: mESC derived neural cells

◢ SRX675957: Th1 Cells

◢ Rara: STRING

Greb1
Wwox
Olfr806
Fbxw7
Setd4
Cbr1
Abhd6
Bmpr1b
Clec2g
Marchf3
Tcstv3
Akirin2
Aadacl2fm1
Trim29
Ssty2
Gm21242
Slc7a15
Tecpr1
Kcnj16
Gnb5
Rgs18
Tmem33
H3c8
H4c8
H2ac10
Hmox2
Gramd1b
Pom121l2
Maneal
Fam24b
Fam24a
Cuzd1
Kpna1
Tmem131l
Tas2r134
Adam5
Cd44
Esr1
Rph3al
Ilf2
Npr1
Cyth4
Olfr180
Dpysl3
Slc13a2
Ovol2
Trib3
Olfr855
Olfr854
H3c10
H2bc13
H2ac13
Olfr1359
Gtf2a1l
Csf2ra
Cxcl1
Klf4
Cyfip2
P4ha3
Tent5c
Mettl7a2
Methig1
Higd1c
Slc14a2
Acacb
Magel2
Sumf1
Ier5
4921539E11Rik
Fhl1
Ccin
Vgll2
Olfm1
Nkx2-6
Mrps2
1700007K13Rik
Dlg4
Acadvl
Tro
Krt15
Krt13
Creb3l3
Mettl14
Kctd2
Atp5h
Mrpl58
Gja4
Ranbp3l
Ceacam12
Trim40
Trim31
Slc33a1
Gmps
Caskin1
Cdk5rap2
Olfr1461
Olfr1459
Usp25
Stk3
Il22ra2
Gm3415
Gm3402
4930449I24Rik
Fam83a
Sbk2
Atp5g1
Abcc12
Fanci
Nfrkb
Prkcb
Rlbp1
Iqcf6
Tpm2
Ccn4
Sympk
Tmem211
Asb2
Ei24
Pdcd1
Gm648
Slc38a5
Gzmk
C1rb
Mycn
Nup50
Ubash3a
H60c
Olfr761
Olfr646
C1ra
Vmn2r55
Asph
Nox3
Npbwr1
Omp
Btnl6
Habp2
Adam32
Adamts19
Skor2
Haus4
Faim
Dcpp1
Snx6
Xpnpep1
Chn2
Hal
Musk
Plscr2
Ptgr1
Map10
Eif2s3y
Gabrb3
Svs5
Olfr677
Appl2
Polr3e
Adck5
Nipal1
Cnga1
Cela1
Gcgr
Il17b
Trpm1
Fgl2
Il31ra
Rbmy
Gm21708
Gm21677
Lgi4
Fxyd7
Fxyd1
Vgll4
Amy2a5
Amy2a4
Amy2a3
Amy2a2
Cpa1
Stpg4
Dpysl2
Slc44a3
Pnma2
AU018091
Ttf1
Cfap77
Nlrp4c
Trim7
Trim41
Rrn3
Htr7
Tnfsf15
Sycp2l
Gcm2
Kcnn2
Cbx4
Ap3s2
Gm12887
Ing3
Gm21302
Gm20852
Sacm1l
Wdr35
Mrtfa
Agbl5
Adcy10
Etv3l
Iqcm
Fam227b
Dtwd1
Fbxo31
Aqp7
Olfr1129
Rsph3b
Gm20806
Sema4f
M1ap
Gm20826
Gm20909
Gm20747
Pcdh20
Sh3bp4
H2bc6
Mro
Serpinf1
Igip
Grap
Lipf
Defb48
Defb47
Otub2
Olfr1128
Asgr1
Gucy1a2
Nop58
Chchd3
Tll1
Tacr2
Pdgfra
Ehd4
Vmn1r175
Lrrc10b
Thbs4
Esd
Akap14
Tmigd1
Il12rb2
Dipk2b
Ankrd66
Onecut3
Gc
Klra10
Limd1
Spag6
Nr2e3
Sirt2
Nfkbib
Oxct1
Arhgap39
Best2
Ppp3r1
B4galnt3
Pgbd1
Prss52
Prss51
Timm8a2
Prss55
Rab7
Limch1
Il1b
Vit
Gm20822
Sbno2
Stk11
Map4k4
Mill1
Olfr1274
Oxgr1
Spata16
Pnliprp1
Lrmp
Tpcn2
Ms4a4b
Sgcz
Mocs1
Enpep
Ptprb
Cntnap5c
Calm4
Slc26a4
Trim2
Cxcl11
Zfp275
Gm10471
Slc2a9
Gria3
Gm51598
Gm21943
Gm21330
D7Ertd443e
Zfp949
Mypn
Inmt
Gas1
Ccr8
Myh2
9430069I07Rik
Gfi1b
Pnma1
Scn8a
Vcan
Fam163a
Klhl40
Lvrn
Carnmt1
Atp1a4
Ripor3
Megf6
Olfr804
Olfr803
Ugt1a8
Eva1a
Snorc
Rassf9
Nrk
Sumo1
Dnajc27
Igdcc4
Akap8l
Alg14
Cacna2d4
Knstrn
Spg20
Scgb2b2
Olfr547
Alx4
Xrcc1
Pinlyp
1700012B07Rik
Slc6a15
Pcx
Steap4
Lilr4b
Slco2b1
Vmn2r79
Spink5
Gm20815
Prxl2b
Gm4981
Dux
Muc5ac
Galnt2
Ppbp
Cxcl5
Il19
Rffl
Olfr1181
Npy6r
Olfr1480
Fcrl6
Il24
Depdc1a
Btbd3
Ppm1e
Tmprss11c
Kcna6
Apol8
Syt4
Fbll1
Sla2
Hexb
Prl3c1
Rps11
Npy5r
Tbc1d30
Adcyap1
Prl7b1
Acy3
Aldh3b2
Zp1
Tmem64
Tmem30b
Vmn2r91
Gm42517
Gpr141
Rgs9bp
Ankrd27
Tgfbr3
Mpped1
Ly75
Amotl1
Sema4b
Asap1
Fmc1
Hsd11b1
Gstm7
Zfp101
Gm4787
Iqschfp
Iqcj
Olfr1510
Hook1
Trpm3
Rnf181
Foxp2
Tmprss11e
Rnf11
Cyp2f2
Vamp5
Zfp316
Rpl34-ps1
Rpl34
Adrb1
Pibf1
Dis3
Wdr92
Pno1
Defb8
Slc5a9
Hlx
Tet2
Malt1
Myo1d
Eepd1
Tgfb2
Klri1
Mrgpra2a
Il4
Dytn
Tdrd7
Izumo3
Taf3
Ss18
Ccn3
Rab22a
Marco
Ifna6
Ifna5
Ifna7
Ifna11
Olfr1183
Olfr1182
Cox8c
Rps29
Lrr1
Tube1
Fam229b
Lum
Vmn1r205
Gm765
Olfr809
Olfr808
Zscan2
Fads2
Rps6ka6
Sele
Wif1
Avpr1a
Cdh20
Gtpbp8
Rnase4
Ang
Alox12b
Atp4a
Gnl2
Psg22
Olfr243
2410137M14Rik
H2-M5
Gm34531
Col24a1
Gzmg
Havcr2
Rock1
Mecom
Shox2
Rsrc1
Cngb3
Pid1
Tmem178
Btrc
Knl1
Slc28a2
Rgr
Lrit1
Tmem42
Tgm4
Rpl11
Trim58
Fer
Ptbp2
Cstdc4
Runx1
Apcdd1
Olfr1168
Olfr66
Usp26
Cbll1
Olfr367-ps
Herc6
Vmn1r171
Myl1
Rab27b
Gm36210
Gm14151
Dab2
Nkx2-2
Gm14147
Papln
Bri3bp
Plekhg1
Mylk3
Igfbp2
Ackr4
Slc15a1
4932438A13Rik
Lpin1
Fosb
Eomes
Zfp108
Cxxc4
Zfp93
Olfr685
Hbb-bt
Hbb-b2
Oasl1
Atxn7l3b
Mta3
Slc16a7
Tmem144
Tor1b
Fahd2a
Camk2n1
Phactr3
Galnt10
Slitrk3
Nemf
Dtx4
Tg
Apoh
Olfm5
Pgf
Klk9
Klk8
Klk7
Sptbn2
Gm960
Mpzl1
Olfr449
Nags
Rab7b
Cmas
Imp4
Ccdc115
Olfr121
Nanos2
Slc8a3
Slc7a14
Prkdc
Mcm4
Erp27
Sec14l1
Iigp1
Tmcc3
Mfsd9
Tanc1
Katna1
Ablim1
Nrg3
Gabrp
Pde4a
Odam
Rasip1
Izumo1
Fbxo44
Fbxo2
Fut1
Fgf21
Fbxo6
Islr
Rergl
Srgn
Dcun1d4
P2ry4
Arr3
Chrna9
Fgf2
Slain1
Mup2
Mup15
Bcat1
Pimreg
Aipl1
Sbp
Sorbs1
Olfr1066
Rnf43
Cacnb2
Ltbp1
Ibsp
Dcpp3
Olfr652
Olfr122
Olig1
Dpp6
Gnal
Fam3c
Olfr1420
Gm21394
Olfr47
Gpr171
Prkag2
Lce1f
Lce1e
Olfr313
Fam183b
Olfr1311
Bgn
Tcaf3
Olfr417
Tmprss11g
Ghrhr
Lgi1
Srsf3
Adamts16
Ppp6r3
Fads3
Gpr6
Iqcf1
Slc30a3
Sh2d1a
Mfap5
Hrh1
Cd209f
Bmp7
Ubr4
Ptgdr
Fdxacb1
1110032A03Rik
Hspb2
Cryab
Tmbim4
Irak3
Gfpt2
Dsg1a
Prl4a1
Arhgap36
Ctnna3
Rnase12
Olfr750
Zic4
Nkx2-5
Prdx6
Zbtb2
Irf2bp1
Gsdmc4
Vmn2r94
Ces1f
Slc25a13
Cfap45
Gpr142
Btbd17
Tgtp1
Hemgn
Pax7
Srcin1
Gpr33
Gm14137
Gchfr
Rmdn3
Med18
Rbmxl2
Olfr1375
Olfr1015
Gm45337
Gm39115
Mapre2
Zfp647
Sting1
Vinac1
Ttl
Nkx3-1
Nfasc
Zfp33b
Rnase10
Ubash3b
Hrh2
Dglucy
Atp6ap2
Sval3
Mctp1
Zfp184
Chrna2
Rp1
Card19
Vsx2
Marcksl1
Mboat1
Ube2s
Fam89a
Hnrnpul1
Cyp3a25
Myl3
Mcl1
Mylip
Stk35
Zfp944
Zfp758
Mthfd2
Pan3
Tmem220
Tbcel
Wbp1
Ino80b
Acp1
Ddx42
Wipf3
Klhl29
Wrap73
Trp73
Olfr877
4930550C14Rik
Gm20868
Gsdma2
Arnt
Olfr846
Gm21704
Gm21693
9330159F19Rik
Cd53
Pamr1
Dcaf12l2
Nrep
Begain
Gm21469
Gm20917
Tnik
Sorbs2
Clnk
Nt5c1b
Olfr510
Krtap6-1
Gm10228
Olfr1022
Olfr1093
Ddx3y
Prss29
Prss28
Vmn1r40
Epha5
Rtkn
Vmn1r41
Pla2g4a
Cfap126
Lrig3
Klk1b16
Shank1
Clec11a
Rpl26
Rgs8
Olfr1062
Olfr1061
Ncoa2
Ddx58
Hspa12a
Chic1
4930519L02Rik
Eno4
Alox5ap
Efnb3
Zfp791
Cgrrf1
D030056L22Rik
Zfp322a
Klra8
Klra21
Lrrc23
Eno2
Sowahb
Spata6
Gm9733
Sh3pxd2a
Timd4
Cacna1g
Ankrd55
Ercc1
Hoxb1
Osbpl9
Tut7
Gsx2
Mff
Nxpe2
Luzp4
Crisp1
Ciita
Sim2
Agbl4
Acp6
Selenbp1
R3hdm2
Vcpip1
Ly6l
Capg
Shisa7
Car13
Snx19
Traf6
Gm17660
Cgn
Supt16
Dagla
Msx3
Uprt
Naa15
Nr3c1
Prmt7
Tlk1
Abr
Pomgnt2
Stap2
Mpnd
Snrnp35
Rilpl2
Ap4e1
Intu
Map2k5
Olfr119
Gm38510
Nek3
Grip1
Ptprn2
Akap17b
Prss47
Myo18a
Pknox1
Slfn4
Gpr61
Gnai3
Hk1
Rftn2
Phgr1
Disp2
Ccdc9b
Ott
Gm15107
Gm15085
Siah2
Ces3b
Tctn1
Extl1
Dnah7b
Fbxw8
Prr5l
Commd9
Zfhx2
Thtpa
Mnat1
Amn
1700028K03Rik
Six4
Dcaf7
Zp3r
Gm3646
Rasgrp3
Nell1
Arpin
H2-Q10
Ccdc57
Olfr1
Stc1
Olfr1364
Inka2
Rarb
Cdv3
Mpig6b
Ly6g6c
Ly6g6f
Ly6g6e
Ly6g6d
Grid2ip
Nucb2
Slc2a10
Asmt
Fubp3
Il11ra2
Gm2002
Gm13305
Ccl21b
Slc44a5
Vmn1r212
Ifna13
Exosc6
Lrrtm4
Znrf2
Zdhhc17
Chpf2
Abcf2
Slx4ip
Cyp2d9
Sf3a1
Ccdc157
Olfr222
Cped1
Grn
Pak3
H2-Eb1
Mkks
Aoah
Saa4
Apba2
Olfr1402
Olfr813
Cyp4f18
Scgb2b1
Vmn1r224
Arhgef38
Olfr1200
Olfr1199
Fmn1
Ndp
Svep1
Fabp6
Igsf1
Pgm1
Olfr671
Pde6h
Arhgdib
Serpinb12
Gal3st2b
Pate11
Acsm2
Ccdc172
Samd14
Vstm2l
Lelp1
9530002B09Rik
Trappc3l
Ppp4r4
Gm35586
Il5ra
Pnp2
Lyzl1
Gpr174
Gm14461
Fbln5
Calhm4
Add2
Aass
Crebzf
Pigz
4921509C19Rik
Capn3
Tmbim1
Ms4a1
Kctd1
Nsa2
Gfm2
2310050C09Rik
Klk1b3
Klk1b24
Fibp
Ccdc85b
Ces2a
Stau2
Foxp4
Zfp759
Sfi1
Eif4enif1
Ttc39c
Orai1
Csk
Sp7
Fmod
Bsx
Phldb1
Olfr504
Cd40
Bpifb9b
Tmem231
Gabarapl2
Rxrg
Nup188
Dolk
Ctdspl
Trpc4ap
Mynn
Actrt3
Coro6
Prl7c1
Atoh7
Gulo
Slc16a10
Abt1
Cep85
Prep
Hacl1
Btd
Xdh
Gm826
Lmo3
Kcna3