ChIP-Atlas: Target genes

Potential target genes for Rara

Query protein: Rara
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX4369785 | Germline stem cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
Rara's Target genes

◢ Rara: Average

◢ SRX018669: ES cells

◢ SRX10562781: ES cells

◢ SRX208055: ES cells

◢ SRX208062: ES cells

◢ SRX520462: F9

◢ SRX520468: F9

◢ SRX520474: F9

◢ SRX520479: F9

◢ SRX3301664: Forelimb

◢ SRX3301665: Forelimb

◢ SRX4369776: Germline stem cells

◢ SRX4369779: Germline stem cells

◢ SRX4369782: Germline stem cells

◣ SRX4369785: Germline stem cells

◢ SRX337439: Liver

◢ SRX018670: mESC derived neural cells

◢ SRX118692: mESC derived neural cells

◢ SRX118693: mESC derived neural cells

◢ SRX675957: Th1 Cells

◢ Rara: STRING

Pald1
Oasl1
Greb1
Tcstv3
Csf2ra
Erdr1
Wwox
E030030I06Rik
Brox
Aida
Vmn2r102
Fbxw4
Abhd6
Vmn2r72
Tmem18
Setd4
Cbr1
Asmt
Ubtfl1
Esr1
Lmbrd1
Slc14a2
Tecpr1
Cldn34d
Aadacl2fm1
Olfr806
Gm20594
Ankar
Kpna1
Abca3
Abca17
Hexb
Gm525
Nkx2-6
Txndc11
Sympk
Acacb
Tent5c
Mcl1
Slc15a1
Cdv3
Ube2s
Cox8c
H3c8
Gzmk
Marchf3
Tex14
Il31ra
Jund
Tet2
Iqcn
H4c8
H2ac10
Pibf1
Dis3
Rad23a
Calr
Pcdh20
Arl4d
H2bc6
Slc7a15
Tmem211
Olfr855
Olfr854
Sspn
Eapp
Tmem231
Gabarapl2
Adgra2
Olfm1
Rbks
Babam2
Fbxw7
Farsa
Akirin2
Tmem181a
H3c10
H2bc13
H2ac13
Oxnad1
Dph3
Tmem125
Hivep3
Tomm5
Hoxb13
Gpx4
Camk2n1
Efnb3
Ints3
Bbs1
Kcnk5
Rplp2
Bcl2a1a
Xbp1
Bmpr1b
Aqp3
Fubp3
Atp11b
Plekhb1
Nemf
H4c3
H1f6
Gcgr
Ccdc171
H3c2
H2ac4
H1f3
Mtf2
Pdgfrb
Cdx1
Zfhx2
Thtpa
Rarb
Sbno2
Slc43a1
Cdk15
Tmem33
Slc25a22
Pidd1
Olfr1274
H4c2
H4c1
H3c1
Socs3
H3c3
H2bc3
BC107364
Mkrn1
Fam227b
Dtwd1
Dennd2c
H4c4
H3c4
H4c6
H3c7
H2bc9
Xylb
Fitm2
Bcl2a1b
Notch4
Cyp26a1
Rps29
Lrr1
Uri1
Stk11
H2bc12
H2ac12
H2bc7
H2ac7
H1f2
Zfp949
Znfx1
Ilf2
Unk
H3f3b
Trim29
Tm7sf3
Med21
Hmox2
H2bc8
H2ac8
H4c9
H2bc11
H2ac11
Tmem191c
Plbd2
Enpp4
Tctn1
LOC666331
Gm11634
Adcy5
Prdx6
Clec2g
Srp14
H3c6
Ssty2
Gm21242
Brwd1
H4c11
Ifna13
Taf13
Maneal
Oaz2
Cmip
Agpat5
Aldh9a1
Rsph3b
Rdm1
Cidea
Rasip1
Izumo1
Bcl2a1d
Tal2
1700037H04Rik
Capns1
Trim7
Slc6a16
Cd37
Ttc39d
Srsf7
Cerk
Fbxo44
Fbxo2
Zbtb4
Slc35g3
Polr2a
Mafa
Tcp11
Fut1
Fgf21
Tfrc
Cic
Pspn
Clpp
Alkbh7
Atp5g1
Olfr180
Snai1
Ksr1
Kat7
Mtnr1a
Rpgrip1
Cd209a
Hoxb4
H1f1
Abl1
Rhobtb1
A930033H14Rik
H3c11
H2bc22
H2ac22
H1f5
Ovol2
Pom121l2
Lag3
Pmepa1
Lasp1
Gm10710
Dchs2
Klf2
Mycn
Nudt4
Ier5
Bmerb1
Baz1b
Prl3c1
Hspa8
Foxp1
Tnfsfm13
Tnfsf12
Bcat2
Cd44
Ect2
Ubb
Ucp2
Poldip3
H4bc24
H2bc23
H2ac24
H2ac23
Cnn3
Fndc3b
Fbxo6
Nek2
Mreg
Cxcl1
Ier2
H2bc14
H4c18
Taf12
Gmeb1
Gramd1b
H2aj
Gm36210
Vgll2
Slc33a1
Gmps
Gnb5
Adam5
Xpo1
Rsc1a1
P4ha3
Tm2d2
Ncmap
Adam9
Taf4
Ttpal
Mylip
Dppa2
Abr
H3c15
H3c14
H2ac19
H2ac18
H4f16
Hspa5
Dpagt1
Ncor1
Prxl2b
Trpm3
Usp25
Ifitm7
Sub1
Cyth4
H4c14
H3c13
H2bc18
Dusp9
Kcnj16
Wdtc1
Rnf19b
Ing1
Cars2
Mdga1
Creb3l3
Extl1
Itga5
Adgre5
Fam24b
Fam24a
Cuzd1
Crebzf
Pigz
Ccin
Rarg
Phf5a
Aco2
Malt1
Nodal
Tmem131l
Gtpbp4
Cfap74
Mettl14
Rusc1
Ei24
Sgf29
Angptl8
Rnf13
Prkdc
Mcm4
Dnah7b
Ap3s2
Plekha7
Rcc1
Trib3
Col6a6
Hoxb5
Hsd17b14
Sfi1
Nabp1
Smyd2
Nfyb
Gadd45b
Slc13a2
Srsf3
Tll1
Eif4b
Galnt2
Ints6
H2bc21
H2ac21
H2ac20
Ubr4
H2bc4
H2ac6
Sertad2
Taar6
Dlg4
Acadvl
Hmbs
H2ax
Sec22c
Eif4enif1
C1qbp
Zdhhc18
Ccdc92b
Zfp827
Gja4
Golga7
Ttk
Tacr2
Pomgnt2
Akap8l
Icam1
Habp2
Nectin2
Evi5
H4c12
H2bc15
H2ac15
Ubxn2a
Atad2b
Hnrnpab
H4c17
Bmt2
1700067K01Rik
Tmem167b
Letmd1
Scn8a
Grasp
Foxo3
Klf4
Trim41
Rgs18
Mrps2
1700007K13Rik
Jarid2
Ppdpf
Gtf2a1
Unc93a2
Smarca5
Ppp3r1
Hjurp
A730008H23Rik
Zc3h12a
Gstp2
Gstp1
Dedd
2510009E07Rik
Hrob
Fhl1
H1f4
Fam53c
Cdc25c
Arrdc2
Hspb8
Creld1
Rab34
Proca1
Gm3448
Gm3417
Dock6
Tctex1d4
Plk3
Btbd19
Nufip2
Cyp11a1
Septin1
Dcaf4
Osbpl1a
Tmem50a
Syf2
Rsrp1
Slc29a1
Mymx
Sp8
Xpnpep1
Hsp90aa1
Psmd12
Pitpnc1
Smc3
Btg2
Ndufs7
Cited2
Mphosph9
2810006K23Rik
Fanci
Caskin1
Fbxo31
Cenpm
Sumo1
Tmem42
Map10
Asph
Tgm4
Tbl1xr1
Olfr1359
Zswim8
Fcgr4
Chchd1
Rab7
Nop58
Mok
Rrn3
Kng2
Tcte3
Gm3435
Zbtb37
Rai1
Elavl3
Kctd2
Atp5h
Pold2
Acp6
Rpl11
Btbd16
Cacng6
Mtg2
Ube2o
Ubc
Guf1
Aanat
Tmigd1
Dgke
Atp2a2
Misp3
Ttf1
Kdm3b
Cfap77
Cox7a2l
Tob1
Arid5a
Trim17
H3f4
Onecut3
Rph3al
Nudt1
Sdha
Ccdc127
Arf4
Zfp740
Csad
Cotl1
Rpl3
Krt15
Krt13
Asgr1
Arhgap19
9030025P20Rik
Rab37
Mettl16
Cpa1
Ndufb8
Bcar1
Npffr2
Stap2
Mpnd
Nfrkb
Slc17a7
Septin11
Hoxa1
Abcc12
Sntb2
Nanog
Il17b
Pcx
Epha2
Tbc1d10b
Mylpf
Rnd3
Pus1
Ep400
Acy3
Prdx2
Junb
Acot7
Tsc22d1
Taar7a
Ninj2
Atp6v0d1
Agrp
Porcn
Sirt4
Tefm
S1pr2
Ggact
Lefty1
Sacm1l
Kazn
Ranbp3l
Gja1
Ghdc
Myrf
Jam2
Tpm2
Thrsp
Ptprf
Dcpp1
Itga3
Sepsecs
Hexim1
Rcor2
Mmp11
Gm867
Chchd10
Phc1
Rab11fip2
Chchd5
Syngr1
Slc9a1
Alg14
Calm2
H2-DMa
Mettl7a2
Methig1
Higd1c
Mrpl58
Map7
Rfc5
Agbl5
Rps11
Ankrd39
Zfp532
Kank3
Gm20806
Sec31b
Rnf169
Mis18bp1
Nphs1
Kirrel2
Atg14
Itpk1
Sertad1
Coa7
Sde2
Blmh
Hgsnat
Stra8
Chd9
Senp3
Fam32a
Cib3
Unc93a
Fus
Tmem170
Mybpc3
Hrh2
Lrch4
Fbxo24
Wdr92
Utp14b
Pno1
Hps5
Gtf2h1
Acsl3
Thap4
Gm3415
Gm3402
4930449I24Rik
Gm17660
Mpp7
Stra6
Car5a
Sh3bp4
Sbp
Dpysl3
Ctdsp2
4921509C19Rik
Sgk1
Ifna6
Ifna5
Gtf3a
Uqcr11
Mbd3
Msi1
Twsg1
Zfp143
Txnip
Slc2a9
Resf1
Dpp4
Tas2r134
Stk3
Srsf5
Dctn6
Cbx4
Insig1
Rnaset2b
Capn3
Wif1
Tmem107
Csrnp2
Psma6
Dtx4
Tube1
Fam229b
Sumf1
Trpm1
Spata33
Pltp
Chmp1a
Mbd6
Ddit3
Kdm3a
Amy2a5
Amy2a4
Amy2a3
Amy2a2
Zfp979
Zdhhc12
Pkn3
Fut8
Haus1
Atp5a1
Taok3
Fads1
Ppp1r10
Mrps18b
Atat1
2410137M14Rik
Coro1b
Tnrc18
Psmb7
Plxdc1
Mib2
Idh3b
Gm648
Dnajb9
Uck1
Cdk5rap2
Tro
Rnaset2a
Pbld2
Hnrnph3
Zswim3
Acot8
Ccn4
Psmd7
Npbwr1
Spred2
Gtf2a1l
Spg20
S100g
4921539E11Rik
Prdm14
Carnmt1
Sema4a
Ss18
Prdm10
Klf6
Tle5
Zfp36l1
Llgl2
Hagh
Fahd1
Crlf2
Nsrp1
Usp37
Cphx3
Cphx2
Cphx1
Naglu
Ttc24
Iqgap3
Dgat2
Arl15
Mro
Ddit4
Dnajc27
Calm1
Tcta
Rhoa
Gm4981
Dux
Amt
Eif2s3y
Rbm14
Gm21992
Eif4h
Usp4
Pml
Msh6
Gtf2b
Gpx1
Aqp7
Wsb1
Cltc
Msgn1
Mobp
Hsp90ab1
Aven
Rxfp4
Appl2
Ctsl
Haus4
Nkg7
Cldnd2
Fam25c
Nsd1
Lrrc10b
Cbr3
D230025D16Rik
Smdt1
Ndufa6
H2-Q8
H2-Q6
Brd2
Adck5
Srgn
Hspbp1
Brsk1
Ankrd28
Actn4
Raf1
Ankrd44
Ly75
Caln1
Selenok
Hbegf
Atp1a1
Zfp791
Pyroxd1
Olfr646
Gpr152
Cabp4
Rwdd2b
Ltn1
Abcf3
Gpcpd1
Pnp
Tmem116
Poli
Erp29
Aplp2
Vars
D17H6S56E-5
Slc4a9
Ss18l2
Ptprcap
Gadd45a
Stk35
C1ra
Serpinf2
Etnk2
Actb
Slc25a13
Rpl17
Nags
BC031181
Rnf103
Jpt1
Tcirg1
Ndufs8
Myo18a
Eif4g2
Ceacam12
Pick1
Gapdh
Mrm2
Vps37d
Atxn2
Eif2b3
Zfp33b
BC005537
Obi1
Clu
Dhx8
Bcl2l11
Trim40
Trim31
B3gnt7
Trmt1
Nacc1
Men1
Map4k2
Il3ra
Mat2a
Lman1
Id3
Tubb4b
Stpg3
Slc34a3
Sbk2
Fam166a
Spen
Kmt5b
Rab8a
Tmed10
Tdrd7
Ermard
Zfp839
Exosc6
Mpzl1
Gipc1
Prdx1
Errfi1
Dhx32
Gpn2
Nme1
Magel2
Maats1
Cox17
Kif2c
Exosc5
Bckdha
Srsf2
Mfsd11
Mettl23
Vps35l
Sema4b
Lipe
Sf3b1
Cog6
Mllt6
Dpf3
Ccdc120
Ptger1
Cyfip2
Dusp1
Dag1
Abcc4
Mrpl44
Mpdu1
Eif4a1
Slc39a4
Cdh12
Nup50
Hcrt
Rreb1
Mknk2
Ifngr1
Ifna7
Dnajc30
Bud23
Camk1
Tmem135
Tmem230
Pcna
P4ha1
Klf10
Cds2
Ccdc58
Ttc25
Tmbim1
Shank1
Clec11a
Tmem129
Tacc3
Slbp
Ctnna3
Ndufaf3
Impdh2
H2-Bl
Dalrd3
Itch
Ms4a4b
Slc35b2
Slc18b1
Rps12
Dhx9
Ccdc102a
4932438A13Rik
Snrnp35
Rilpl2
Lgals9
G0s2
Serpinh1
Slc12a7
Snx6
Adam32
Arrdc3
Spc25
G6pc2
Kcnk4
Gpr137
Bad
Ptp4a1
Srrm3
Fam131c
Ubash3a
Tnfrsf19
Zfp148
Tmbim4
Irak3
Marcks
Gas1
Ppp1r15b
Btg1
Wsb2
Asb2
Amd2
Amd1
Mypn
Grap
Med1
Hnrnpa2b1
Cdk12
Cbx3
Iqcf6
Gtf2f1
Steap4
Muc1
Nox3
Wiz
Rab7b
Dnaja1
Trim2
Mrpl37
Cyb5rl
Amacr
Zfp598
Npr1
Gm7244
Dop1b
Ms4a1
Ago2
Slc25a5
Selenbp1
H2-M5
Ehd4
Cpsf1
Slx1b
Nipal1
Cnga1
Bola2
Arl6ip1
Vstm4
Adap1
Trp53inp1
Mmp9