ChIP-Atlas: Target genes

Potential target genes for Rara

Query protein: Rara
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX520462 | F9
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
Rara's Target genes

◢ Rara: Average

◢ SRX018669: ES cells

◢ SRX10562781: ES cells

◢ SRX208055: ES cells

◢ SRX208062: ES cells

◣ SRX520462: F9

◢ SRX520468: F9

◢ SRX520474: F9

◢ SRX520479: F9

◢ SRX3301664: Forelimb

◢ SRX3301665: Forelimb

◢ SRX4369776: Germline stem cells

◢ SRX4369779: Germline stem cells

◢ SRX4369782: Germline stem cells

◢ SRX4369785: Germline stem cells

◢ SRX337439: Liver

◢ SRX018670: mESC derived neural cells

◢ SRX118692: mESC derived neural cells

◢ SRX118693: mESC derived neural cells

◢ SRX675957: Th1 Cells

◢ Rara: STRING

Greb1
Olfr806
Wwox
Setd4
Cbr1
Acacb
Bmpr1b
Trim29
Abhd6
Akirin2
Fbxw7
Tcstv3
Marchf3
Aadacl2fm1
Tmem33
P4ha3
Slc7a15
Olfr855
Olfr854
Ssty2
Gm21242
Cyth4
Vgll2
Tll1
Clec2g
Olfr180
Maneal
Kpna1
Ovol2
Kcnj16
Sympk
Fam24b
Fam24a
Cuzd1
Usp25
Trib3
Csf2ra
Fam227b
Dtwd1
Cd44
Tent5c
Tecpr1
Esr1
Nkx2-6
Ceacam12
Fhl1
Rasip1
Izumo1
Fut1
Fgf21
Gnb5
Nemf
Ppp3r1
Slc14a2
Habp2
Pcdh20
Cxcl1
Krt15
Krt13
Mettl7a2
Methig1
Higd1c
Dlg4
Acadvl
Cpa1
Ilf2
Mill1
Rgs18
Hmox2
Pom121l2
Adam5
Gtf2a1l
Prl3c1
Slc13a2
Malt1
Map10
Olfr646
Olfm1
Gja4
Fgl2
Gramd1b
Abcc12
Mettl14
Mycn
Stpg4
Cox8c
Zfp949
Adck5
Gm3415
Gm3402
4930449I24Rik
Wif1
Rps29
Lrr1
Prkdc
Mcm4
4921539E11Rik
Ranbp3l
Stk3
Dcpp1
Prxl2b
Tmem211
Ly75
Lrrc10b
C1ra
Tpm2
Onecut3
Ap3s2
Gm648
Tmem131l
4921509C19Rik
Asgr1
Omp
Cdk5rap2
Ms4a4b
Ccin
Il17b
Adam32
Ccn4
Trpm1
Rbmy
Gm21708
Gm21677
Adcyap1
H3c8
H4c8
H2ac10
H2bc6
Ier5
Klk9
Klk8
Klk7
Dnajc27
Rph3al
Ttf1
Cfap77
Tro
Creb3l3
Npffr2
Tube1
Fam229b
AU018091
Nfrkb
Trim40
Trim31
Sumf1
Slc38a5
Klf4
Map4k4
Mrps2
1700007K13Rik
Gm20806
Gzmk
Sp7
Gria3
Zdhhc12
Pkn3
Defb48
Defb47
Ei24
Itih2
Gm14151
Eif2s3y
Htr7
Katna1
Gucy1a2
Gcgr
Akap8l
Ing3
Pdcd1
Tmigd1
Ubash3a
Mypn
Mro
Appl2
Carnmt1
Tmem42
Tgm4
Klra10
Mrtfa
Lgi4
Fxyd7
Fxyd1
Sbk2
Pan3
Cdh20
Dpysl3
Etv3l
Chn2
Xrcc1
Pinlyp
Trim58
Il12rb2
Gm20909
Gm20747
Ctag2l2
Fgd4
Amn
Xpnpep1
Hpd
Musk
Sema4a
Defb8
Tmem178
Extl1
Cbx4
Cyfip2
H3c10
H2bc13
H2ac13
Olfr1359
Il19
Adamts16
Gabrb3
Fam89a
Cyp27a1
Prr16
Vstm4
Vmn2r55
Il1b
Ms4a1
Knstrn
Gpm6a
Caskin1
Olfr1461
Olfr1459
Erp27
Olfr1396
Rrn3
Asph
Asb2
Sema4f
M1ap
Iqschfp
Iqcj
A330070K13Rik
Miip
Fv1
Pomgnt2
Spata16
Fer
Tacr2
Rab7
Fosb
Cenpf
B4galnt3
Gpr33
Ripor3
Cyp4f18
Pgbd1
Magel2
Wdr35
Ccr8
Aqp7
Lipf
Slc33a1
Gmps
Sbno2
Stk11
Olfr1066
Dpysl2
Pnma2
Ccn3
Slc26a4
Kcna6
Tcim
Lilr4b
2410137M14Rik
H2-M5
Inmt
Hal
Naaa
C1rb
Tafa5
Atp5g1
Atp1a4
Tg
Olfr1375
Ostn
Amy2a5
Amy2a4
Amy2a3
Amy2a2
Nr2e3
Gpr141
Tas2r134
Dmrtc1c2
Dmrtc1c1
Tbc1d30
Otor
Nox3
Nlrp4c
Cacnb2
Cmah
Alg14
Laptm4a
Arpin
Olfr1128
Iqcm
Ddx42
Gm51598
Snorc
Gm1979
Fcrl6
Pdcd1lg2
Sema4b
Stox2
Gas1
Igdcc4
Olfr1274
Adamts19
Frmpd4
Grap
Avpr1a
Arhgap45
Steap4
Limch1
Gm20826
Gm21302
Gm20852
Lrmp
Ndst3
Olfr1510
Olfr1062
Olfr1061
Prkd2
Tpcn2
1700012B07Rik
Il31ra
Slfn4
Npbwr1
Snx6
Slc44a3
Fads3
Spg20
Obi1
Ifi47
Has1
Rps11
Oxct1
Shank1
Clec11a
F11
Fanci
Rlbp1
Ghrhr
Olfr804
Olfr803
1700018B08Rik
Ptpre
Card19
Skor2
Thbs4
Alox12b
Kcnn2
Cacna1c
Pcx
Iqcf6
Rnase10
Tdrd7
Tmbim1
Klk1b3
Klk1b24
Stap2
Mpnd
Calm4
Zfp101
4930550C14Rik
Atp10a
Ifna6
Ifna5
Ifna7
Ifna11
Havcr2
Zc3hav1
Rasgrf1
Pibf1
Dis3
Mylip
Ppp6c
Gm34531
Ptbp2
Prss47
Btnl6
Capg
Olfr685
Gm3376
Elac2
Vgll4
Ablim1
Dytn
Psg19
Ppbp
Cxcl5
Il4
Megf6
Rps6ka6
Hexb
Slc22a23
Eomes
9430069I07Rik
Rock1
D030056L22Rik
Rgs8
Pla2g4d
Igip
Slc5a9
Trim7
Trim41
Ap1g2
Jph4
Trim2
Topors
Smim27
Pnliprp1
Lrrc23
Eno2
Wipf2
Pak6
Fbxw4
Rsph3b
Edf1
Hsd11b1
Siah2
Traf2
Lrrc20
Nxpe2
Bpifb5
Ddr2
Abr
Iigp1
Dyrk2
Coro6
Pard3
2310050C09Rik
Foxd4
Lrig3
P2ry4
Arr3
Zp1
Il24
Otub2
Fam71f1
Irf2
Ibsp
Sval3
Lum
Vmn2r102
Igfbp2
Msx3
Stk35
Nipal1
Cnga1
Fam83a
Cacna2d4
Ybey
Mcm3ap
Sgcz
Syt4
Lvrn
Olfr66
Dsg1a
Veph1
Cdh26
Bmp7
Olfr424
Klrb1
Vmn1r224
Vmn2r94
Olfr1487
Pcolce2
Olfr125
Gm42517
Ncald
Gc
Pigs
Unc119
Mpig6b
Ly6g6c
Ly6g6f
Ly6g6e
Ly6g6d
Nrg3
Mrln
Poldip3
Sec14l1
Adrb1
Haus4
Rab7b
Ehd4
Tor1b
Gm20822
Cyp2d9
Serpinf1
Vmn2r56
Slc28a2
Marco
Chchd3
Depdc1a
Tmprss11e
Slc16a7
Pnrc2
Nek3
Cyp2f2
Klk1b9
Klk1b1
Prpf38b
Ell3
Olfr1113
Usp37
Npy5r
Best2
Ddx58
Plcd4
Sycp2l
Gcm2
Btbd3
Olfr449
Olfr1183
Olfr1182
Vcan
Hbb-bt
Hbb-b2
Slc17a8
Nags
Pid1
Kcnk9
Tmcc3
Lyst
Olfr761
Foxd1
Agbl5
Gm10471
Copz1
Crebl2
Cxxc4
E030030I06Rik
Mrpl21
Ighmbp2
Iqcf1
Ubr4
4932438A13Rik
Cfap126
Lrrtm4
Kctd1
Atxn7l3b
Muc5ac
Foxp2
Ly6l
Klra8
Klra21
Olfr1129
Tnfsf15
Albfm1
Ltbp1
Olfr12
Olfr652
Slc4a8
Pabpc5
Krt1
Maml2
Tslp
Nup50
Mnat1
Six4
Hoxb4
Galnt2
Snrnp35
Rilpl2
Gm4787
Hoxb3
Olfr367-ps
Olfr846
Kctd2
Atp5h
Mrpl58
Nfe2
Gm12887
Asap1
Pde4a
Slc25a13
Klri1
Olfr1402
Ifna13
Scgb2b3
Olfr122
Asrgl1
Serpina3i
Selenbp1
Rpl36a
Vmn2r91
Hnrnph2
Gla
Sumo1
Nop58
Fut8
Srcin1
Col24a1
Wrap73
Trp73
Gpr6
Ncoa2
Syt3
1700008O03Rik
H60c
Pgls
Niban3
Atp4a
Dab2
Hk1
Gm5936
Tox3
Cmas
Pon3
Trpm3
Pitrm1
Pak3
Chic1
Inka2
Syt13
Lgi1
Nkx2-5
Car2
Sowahb
Evc2
Evc
Ubc
Nup188
Dolk
Rpl36al
Mgat2
Olfr873
Olfr39
Hoxb1
Btrc
Rpl37rt
Gm18905
Svs5
Rab11fip2
Vsx2
Olfr1391
Kng1
Zfp33b
Ahi1
Pus1
Ep400
Ss18
Plekhg1
Tex46
Cyren
Enpep
Intu
Lactbl1
Gm21943
Gm21330
Tgfb2
Runx1
Apcdd1
Akap14
Scgb2b2
Dipk2b
Gzmg
Olfr1181
Aoah
Slain1
Srpk2
Rbfox1
Olfr1008
Herc6
Retnla
Kcna3
Htra4
Ndp
Olfr1006
Htr4
Cnrip1
Krtap19-5
Krtap19-4
Ugt1a8
Izumo3
Vmn1r175
C130073F10Rik
Trim34a
Orai1
Cadm4
Vmn2r79
Lce1f
Lce1e
Cfap45
Ccdc60
Zfp944
Zfp758
Zfp710
Dcun1d4
Zfp108
Zfp93
Cd53
Olfr1200
Olfr1199
Tanc1
Ackr4
Oasl1
Gm21316
Gm20924
Gm20823
Gm20738
Tgtp1
Cyp3a16
Capn3
Vps35l
Med16
Dlg1
Cfd
Nps
4921524J17Rik
Prep
Zfp976
Lzts1
Rtn4r
Echdc2
Prkcb
Mcoln3
Cela1
Fam163a
Tmem144
Olfr877
Pgf
Dclk3
Lgals6
Lgals4
Slc15a1
Zfp647
Rragb
Ctnna3
Gm826
A530032D15Rik
Gm45337
Gm39115
Faim
Il22ra2
Ces2a
Olfr677
Synpr
Klhl40
Wwc1
Camk2g
Npr3
Acy3
Rnf103
Vmn1r205
Mink1
Dpyd
Cstdc4
Kcnj2
Eva1a
Plscr2
Rbmxl2
Rassf9
Scaper
Bcl6
Gm765
Tgfbr3
Skint6
Timm8a2
Gm20868
Aldh3b2
Ankrd9
Fgf2
F9
Cmpk1
Cngb3
Gm21704
Gm21693
Dcaf12l2
Zp3r
Ppp2r2b
Tiam2
Grm5
Sult2a8
Gsdmc2
Ccdc81
Rpl39l
Lamp5
Fthl17f
Adamtsl1
Olfr1441
Phlda2
Acsm2
Lrrn1
Olfr183
Olfr291
Kcne4
Plac9b
Plac9a
Gm9780
Foxp4
Crebzf
Scn8a
Csk
Clk3
Myh2
Syngap1
Phf1
Cuta
Gsdma2
Olfr1420
Olfr1364
Rhd
Srsf3
Myo1d
Gsx2
Mecom
Apoa4
Olfr1
Spata6
Asmt
Eepd1
Nrk
Pzp
Olfr15
Cyria
Cldn34d
Gata2
Npm2
Lrch4
Fbxo24
Gabrp
Gm45618
Zfp316
Chrna9
Gfi1b
Gm38510
B4galt4
Olfr775
Olfr774
Knl1
Zbtb2
Mboat1
Nkx3-1
Syp
Fgfbp3
Jag1
Derl3
Car13
Prap1
Fuom
Gfra2
Larp6
9930111J21Rik2
9930111J21Rik1
Nudcd2
Hmmr
Gsdmc4
Hes7
Aloxe3
Tmem250-ps
Eml4
Cyp2c69
Rftn2
Fmc1
Cped1
4930568D16Rik
Jund
Exosc2
Hnrnpul1
Kri1
Cdkn2d
Brinp1
Camk2n1
Gstm7
Epb41
Dapp1
Ube2v1
Fuca2
Slc7a11
Sh3pxd2a
Pigz
Sirt2
Nfkbib
Acap1
Neurl4
2810408A11Rik
Sema7a
Ptprb
Smug1
Brox
Aida
Ccng2
Limd1
Ap4e1
Zscan2
Osbpl9
Mff
Wipf3
Sf3a1
Ccdc157
Med18
Ptprz1
Ct55
Dysf
Arhgap39
Tbc1d8
Aldh1a1
Dcaf7
Npy6r
Nucb2
Oas2
Sox9
Olfr813
Mctp1
Cd163l1
Dpp6
Mylk3
Arhgef38
Olfr809
Olfr808
Slc34a2
Lmo3
Olfr47
Gm6588
Tnik
Cyp7a1
Frmd4b
Clnk
Svep1
Olfr711
Nsmaf
Olfr510
Krtap6-1
Gm10228
4933405O20Rik
Pde6h
Arhgdib
Cachd1
Psg17
Olfr524
Eda
Rftn1
Pate4
Olfr1451
BC051019
Ascl3
Tesmin
Otol1
Tmem156
Cdcp1
Tgfbr2
Cd226
Cbr3
Srgn
Fga
Fgg
Trarg1
Bhlha9
Grid2ip
Crisp1
Rergl
Acsl6
Chrm1
Tmem101
Klk1b8
St8sia5
Oxgr1
Olfr121
Ttc7b
Icosl
Olfr346
Ly6a
Nrg2
Crym
Abca14
Arg1
Lpin1
Apol8
E330021D16Rik
Acnat2
Zfp583
Shisa7
Tdrd12
Asb12
Slc5a6
Cad
Atraid
Rffl
Vmn1r207
Gm14147
Il11ra2
Gm2002
Gm13305
Pcid2
Cul4a
Dbn1
Mfsd13a
Naa15
Cgrrf1
Nr3c1
Fam240a
Adcy10
Nfasc
0610010F05Rik