ChIP-Atlas: Target genes

Potential target genes for Rara

Query protein: Rara
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX520479 | F9
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
Rara's Target genes

◢ Rara: Average

◢ SRX018669: ES cells

◢ SRX10562781: ES cells

◢ SRX208055: ES cells

◢ SRX208062: ES cells

◢ SRX520462: F9

◢ SRX520468: F9

◢ SRX520474: F9

◣ SRX520479: F9

◢ SRX3301664: Forelimb

◢ SRX3301665: Forelimb

◢ SRX4369776: Germline stem cells

◢ SRX4369779: Germline stem cells

◢ SRX4369782: Germline stem cells

◢ SRX4369785: Germline stem cells

◢ SRX337439: Liver

◢ SRX018670: mESC derived neural cells

◢ SRX118692: mESC derived neural cells

◢ SRX118693: mESC derived neural cells

◢ SRX675957: Th1 Cells

◢ Rara: STRING

Greb1
Olfr806
Abhd6
Fbxw7
Bmpr1b
Olfr180
Setd4
Cbr1
Wwox
Trim29
Slc7a15
Marchf3
Tmem33
Adam5
Tcstv3
Akirin2
Cyth4
Ssty2
Gm21242
Aadacl2fm1
Cd44
Maneal
Kpna1
Vgll2
Nkx2-6
Tll1
Clec2g
Tecpr1
Map10
Habp2
Fhl1
Usp25
Tent5c
Cox8c
Ranbp3l
Ilf2
Mrps2
1700007K13Rik
Fam24b
Fam24a
Cuzd1
Acacb
Rph3al
Rgs18
Lipf
Gramd1b
P4ha3
Ei24
Mettl7a2
Methig1
Higd1c
Krt15
Krt13
Ppp3r1
Mycn
Ccn4
Rgs8
Hmox2
Wif1
Cxcl1
4921539E11Rik
Dcpp1
Ubash3a
Olfm1
Olfr646
Trim40
Trim31
Csf2ra
Gnb5
Kcnj16
H3c8
H4c8
H2ac10
Trib3
Slc13a2
Gm648
Spata16
4921509C19Rik
Tas2r134
Sema4f
M1ap
Cpa1
Esr1
Slc14a2
Havcr2
Sympk
Cyfip2
Gja4
Muc5ac
Gm3415
Gm3402
4930449I24Rik
Npbwr1
Dlg1
B4galnt3
C1ra
Tpm2
Tro
Ovol2
Abcc12
Rrn3
Sumf1
Gtf2a1l
Adck5
Gm14151
Otub2
Gcgr
Cdk5rap2
Eif2s3y
H3c10
H2bc13
H2ac13
Olfr1359
Slfn4
Trpm1
Slc38a5
Tmem131l
Creb3l3
Tmem211
Klf4
Omp
Appl2
Carnmt1
Sbk2
Slc33a1
Gmps
Atp1a4
Lgi4
Fxyd7
Fxyd1
Vmn2r55
Gm12887
Vmn2r91
Pom121l2
Nr2e3
Onecut3
Rbmy
Gm21708
Gm21677
Dmrtc1c2
Dmrtc1c1
Ly6l
Klra10
Pcdh20
Sumo1
Nop58
Ccin
Mill1
Il31ra
Iqcf6
Aqp7
Mro
Zc3hav1
Trpm3
Wdr35
Ccn3
Nlrp4c
Lilr4b
Pnliprp1
Stk3
Pdcd1
Calm4
Olfr1396
Fut8
Gm4787
Slc6a15
Ehd4
Ccr8
Dlg4
Acadvl
Ly75
Gm36210
Il17b
Amy2a5
Amy2a4
Amy2a3
Amy2a2
Apcdd1
Map4k4
Klk9
Klk8
Klk7
Rps29
Lrr1
Mettl14
Asph
Slc16a7
Fgl2
Olfr855
Olfr854
Nfrkb
Adam32
Erp27
Lrrc23
Eno2
Sbno2
Stk11
Snx6
Slc44a3
Ppbp
Cxcl5
Fam89a
Olfr1461
Olfr1459
Lgi1
Alg14
Tube1
Fam229b
Gpr33
Il22ra2
Epcam
Sema4b
Gria3
Wdr92
Pno1
Alox12b
Gm20806
Ceacam12
Nipal1
Cnga1
Trim58
Il12rb2
Gstm7
Olfr1128
Gm21943
Gm21330
Olfr877
Rgr
Lrit1
Zfp949
Kcnn2
Ndst3
H2bc6
Fgfbp3
Dpysl3
Sema4a
Selenbp1
Fam227b
Dtwd1
Olfr1066
Hal
Nrk
Rsph3b
Gc
Kng1
Gabrb3
Stpg4
Kcnk9
Htr7
Pon3
Iqcm
Caskin1
Tmem42
Tgm4
Gzmk
Asgr1
Capn3
Mnat1
A330070K13Rik
Six4
Rasip1
Izumo1
Fut1
Fgf21
Gm765
Zfp944
Zfp758
Limd1
Gm20826
Tmprss11e
Klra8
Klra21
Cxcl11
Gm20868
Poldip3
Mypn
Fanci
Rlbp1
Il1b
Bpifb5
Glipr1l1
Dtx4
Gm51598
Ap3s2
Dpysl2
Pnma2
Prkd2
Akap8l
Ing3
Thbs4
Fam240a
Tdrd7
Col24a1
Extl1
Ttf1
Cfap77
Pak3
Abr
Etv3l
Depdc1a
Frmpd4
Card19
Anxa6
Sf3a1
Ccdc157
Fam163a
Il1r1
Serpinf1
Myh2
Katna1
Kcna6
Defb48
Defb47
Il4
Gpr141
Ms4a1
Sycp2l
Gcm2
Limch1
Gm21302
Gm20852
H60c
Crisp1
AU018091
Vmn1r205
Rab34
Proca1
Rps11
Tcim
Zfp647
Gas1
Srsf3
Olfr121
Slc26a4
Cbx4
Olfr873
Olfr39
Scgb2b1
Sh3bp4
Dnajc27
Syn2
Fcrl6
Olfr12
Synpr
Megf6
Prxl2b
Lum
Vcan
Mpped1
Olfr119
Magel2
Amn
Fads3
Hsd11b1
Tox3
Olfr804
Olfr803
Bcl6
Atp4a
4932438A13Rik
Sec14l1
Rab22a
Steap4
Gm21316
Gm20924
Gm20823
Gm20738
Tex46
Ybey
Mcm3ap
Skor2
Plscr2
Lactbl1
Akap14
Shox2
Rsrc1
Usp26
Aoah
Srpk2
Igbp1b
Lrch4
Fbxo24
2310050C09Rik
Xpnpep1
Laptm4a
Cacnb2
Pid1
Tmem178
Musk
Adamts16
Nfasc
Tmigd1
Gm34531
Apoh
Knstrn
Rps6ka6
Siah2
Alx4
Nox3
Rock1
P2ry4
Arr3
Casp8ap2
Faim
Ptpre
Snorc
Ltbp1
Tgtp1
Ifna6
Ifna5
Ifna7
Ms4a4b
Ifna11
Btnl6
Prkcb
Ap1g2
Jph4
Eva1a
Cadm4
Olfr222
Tacr2
Psg22
Snrnp35
Rilpl2
Grap
Ttc7b
Asmt
Ccng2
Adamts19
Pcx
Atxn7l3b
Btrc
Il19
Cdh20
Defb8
Vmn2r79
Zic4
Ostn
Ifi47
Pabpc5
F9
Olfr346
Ly6a
Slc2a2
Ripor3
Arpin
Pla2g4d
Poli
Sp7
Nxpe2
Cela1
Fer
Klk1b9
Klk1b1
Tmem250-ps
Adrb1
Gm6588
Rab7b
Kcnj2
Gtpbp8
Car2
Scgb2b2
Ubc
Naa25
Wrap73
Trp73
Sowahb
Gpr142
Mta3
Lrrc20
Btbd17
Zfp101
Igip
Tg
Dclk3
Pigs
Svs5
Unc119
Gm826
Galnt2
Tbc1d30
Prpf38b
Ptgr1
Nup188
Dolk
Cfap54
Dusp26
Gucy1a2
Olfr1274
Prkdc
Mcm4
Stk35
Fosb
Gm20909
Gm20747
Cyp2f2
Olfr1062
Olfr1061
Olfr1480
Cd209f
Slc34a2
Fthl17f
4933405O20Rik
Pdzph1
Slc22a23
Cenpf
Gzmg
Chchd3
Eepd1
Wdfy4
Hnrnpul1
1700018B08Rik
Ugt1a8
Npy5r
Rnf13
Olig1
Avpr1a
Vit
Ikzf4
Foxd4
Slc25a13
Pgls
Niban3
Tut7
Fam71f1
Car13
Cse1l
Nkx2-5
Rab11fip2
Cmas
Mecom
Oxct1
Ibsp
Med16
Olfr761
Cfd
Cstdc6
Adamtsl1
Mboat1
Trps1
Rpl11
Zdhhc12
Pkn3
Zp1
Klk1b3
Klk1b24
Mctp1
Anxa3
Tet2
Zscan2
Dytn
Foxd1
Ubr4
Hes7
Aloxe3
Ghrhr
Slc7a8
Marco
Zfp583
Syt4
Olfr1375
Zfp598
Npw
Chn2
Znrf2
Foxp2
C1rb
Osbpl9
Clk3
Olfr1510
Slc5a9
Ctag2l2
Sval3
Ppm1e
Olfr424
Sh2d1a
Acsl6
En2
Psg17
Jrkl
Ccdc82
Tmem220
Gm10471
Atp10a
Hexb
Xrcc1
Pinlyp
Iigp1
Gtf3c3
Izumo3
Krtap6-2
Cacng6
Lrrc10b
Cyren
Irf2
Casd1
Phactr3
Ncam1
Eomes
Tmem64
Nrg3
Npy6r
Olfr902
Nfe2
Ablim1
Timm8a2
Hbb-bt
Hbb-b2
Chdh
Dnajc6
Islr
D030056L22Rik
Gm8126
Pamr1
Ier5
Cfap126
Chrna9
Pgf
Slc15a1
Acy3
Med18
Aldh3b2
Mrgprh
Lgals6
Lgals4
Mas1
Obi1
Pitrm1
Trpc4ap
Olfr1129
Tafa5
Vmn2r5
Mid1
Spg20
Runx2
Mrtfa
Vmn1r175
Cgn
Gjc1
Adra1d
Atp5g1
Hnrnpr
Olfr677
Asb2
Pan3
Inmt
Gpr61
Gnai3
Btbd3
Trp53inp2
Cyp2d9
Cstdc4
Scgb2b3
Runx1
Coro6
Iqschfp
Iqcj
Slco2b1
Lvrn
Dipk2b
Adcy10
Cxxc4
Dsg1a
Olfr652
Gpr6
Gm3376
Fgf2
Cdh26
Olfr1402
Klrb1
Nps
Olfr1487
9330159F19Rik
Arhgef38
Gm5936
Stc1
Ppp2r2b
Ciita
Nsmaf
Tslp
Htr4
Olfr1022
Krt33a
Olfr214
Olfr213
Cldn34d
Ptgdr
Prr16
Cacna2d4
Myo1d
Igdcc4
Trarg1
Bhlha9
Rergl
Fam207a
Olfm5
Slc10a3
Gm44504
Hoxb4
Haus4
Cfap45
Hoxb3
Higd1a
Slc30a3
Gm38510
Dcx
Dnah7b
Nags
Nup50
Zfp108
Zfp93
Olfr1015
Dgki
Slc28a2
Arhgap39
Stox2
Zbtb2
Fancd2os
Olfr367-ps
Olfr449
Brk1
Il11ra2
Gm2002
Gm13305
Ccl21b
Nemf
Best2
Itih2
Pdhx
Apip
Rragb
Zbtb46
Rasal3
Thg1l
Rnase10
Hemgn
Mars2
Rftn2
Zfp33b
Kdm3b
4921524J17Rik
Tnfsf15
Sall3
Malt1
Cacna1c
Slc41a3
Olfr702
Nr3c1
Wipf2
Ddx58
Olfr1
Krt1
Ophn1
Hoxb1
Rhobtb1
A930033H14Rik
Orai1
Fga
Fgg
Mocs1
Map3k9
Gnmt
Mff
Pdlim5
Rffl
Albfm1
Prr5l
Commd9
Tgfbr3
Nfia
Lyst
Acnat2
Miip
Fv1
Olfr66
Olfr1181
Nucb2
Iqcf1
Veph1
Psg19
Gm21704
Gm21693
Olfr420
Retnla
Lmo3
Tiam2
Gm20854
Olfr490
Olfr1377
Pate11
Olfr1282
Olfr1281
Mfap3l
Arhgef28
Klra3
Mkrn2os
Sgcz
Srcin1
Slain1
Gm17768
Rangrf
Cst11
Slc25a35
H2-Q8
H2-Q6
Ddx42
Ethe1
Zfp575
Nckap5
Adcy8
Rnf11
Trim34a
Tfap2b
Uprt
Ugt1a6a
Rnf103
Scaper
Vstm5
H1f3
H4c6
H3c7
H2bc9
Msx3
Rbks
Babam2
Slc2a9
Gsx2
Stbd1
Rp1
Ppp4r3a
Gnal
B4galt4
Prss47
Apol8
Ppp6r3
Ccdc60
Olfr122
Cyp3a16
Tgfb2
Coa3
Cntd1
Ttbk1
Dnph1
Slc17a8
Grip1
Zfp322a
Klk1b16
Gfi1b
Slc7a11
Ccl2
E030030I06Rik
Derl3
Atp11b
Tmem144
Olfr1183
Olfr1182
Gsdmc4
Olfr671
Crebl2
Btf3
Papln
Slc44a5
Fbxw4
Sncaip
Sim2
Vgll4
Hpd
Fuca2
Cep295nl
Ccdc57
Cstdc2
Olfr846
Nkx3-1
Uri1
Gm14137
Gchfr
Rmdn3
Gm5591
Vmn2r102
Pomgnt2
Sbp
Lrrtm4
Enpep
Gm20822
Nyx
Rnf43
Adcyap1
Zcchc9
Dysf
Dcpp3
Strip1
Otor
Col17a1
Gatad2b
Apba2
Dpp6
Rhd
Mfsd9
Gm21394
Olfr243
Slc14a1
Gpr171
Begain
Grm5
4930519L02Rik
Syt13
Slc29a4
Lef1
Hpgds
Timd2
Afp
Acta2
Zfp457
Cnrip1
Akap17b
Rftn1
Pate4
Scnn1b
Olfr204
Scarf2
1700074P13Rik
Gpr149
Gm11213
Fmod
Srgn
Dyrk2
Naa16
Mtrf1
Gm14147
Smpd3
Tmcc3
Cped1
Hook1
Bsx
Vmn2r56
Zp3r
Pcsk6
Frmd4b
Ccdc81
Rpl39l
Jund
Iqcn
Pdgfrb
Cdx1
Agbl5
Igfbp2
Mink1
Mcoln3
Chst14
Rbmxl2
Rpl37rt
Sele
Olfr1364
Kcnf1
Pik3r5
Gm18905
Eml4
Reg4
Gm45618
Ucma
Nrg2
Il17a
Tceal8
Stmn2
Pdcd1lg2
Ptprb
Ska1
Cxxc1
Kng2
Epb41
Oxgr1
Pard3
Il24
Cmpk1
Wwc1
Robo3
Mrgpra2a
Prr36
Hs6st3
Camk2n1
Prss52
Prss51
0610010F05Rik
Prss55
Gpr35
Prap1
Fuom
Spata6
Apon
Kctd2
Atp5h
Mrpl58
Rarb
Rab7
Auts2
Slc16a14
Hrh2
Shank1
Clec11a
Amotl1