ChIP-Atlas: Target genes

Potential target genes for Cdk9

Query protein: Cdk9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX104410 | ES cells
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Cdk9's Target genes

◢ Cdk9: Average

◢ SRX9144814: 3T3-L1

◢ SRX9144815: 3T3-L1

◢ SRX9144816: 3T3-L1

◢ SRX9144817: 3T3-L1

◣ SRX104410: ES cells

◢ SRX11717263: ES cells

◢ SRX11717264: ES cells

◢ SRX11717265: ES cells

◢ SRX11717266: ES cells

◢ SRX236483: ES cells

◢ SRX020971: Macrophages

◢ SRX020972: Macrophages

◢ SRX020973: Macrophages

◢ SRX020974: Macrophages

◢ SRX1550527: Macrophages

◢ SRX1550528: Macrophages

◢ SRX255482: MEF

◢ SRX277329: MEL

◢ SRX3200439: mESC derived haemogenic endothelium

◢ SRX3200440: mESC derived haemogenic endothelium

◢ SRX3200441: mESC derived haemogenic endothelium

◢ SRX620286: NIH/3T3

◢ SRX620287: NIH/3T3

◢ SRX620288: NIH/3T3

◢ SRX620289: NIH/3T3

◢ SRX735308: Th1 Cells

◢ SRX735309: Th1 Cells

◢ SRX735310: Th2 Cells

◢ SRX735282: Unclassified

◢ SRX735292: Unclassified

◢ Cdk9: STRING

Olfr806
Kpna1
Abhd6
Cldn34d
Wwox
Zfpm1
Aadacl2fm1
Klhl36
Comp
Il31ra
Slc44a2
Angel1
Tsga10
Mfge8
Mfap3l
Tnfaip8
Map2k4
Nkd1
Tbc1d16
Ccdc40
Pcgf5
Dok4
Dchs2
Csf2ra
Fam214b
Zdhhc20
Plxnd1
Dennd4c
Abtb1
Psen2
Nde1
Marf1
Xylt2
Spata2l
Cpm
Acer3
Nrbp2
Gm2a
2310022B05Rik
Txndc5
Acsl1
Cers5
Tpmt
Kdm1b
Ccsap
Pknox1
B4galt5
Lrrfip1
Trrap
Copz1
Ifna13
Zfp143
Znrf3
Rassf4
Dlc1
Fzr1
Slc19a2
Gdpgp1
Cib1
Cadm4
Tspan17
Fam227b
Dtwd1
Tbc1d14
Sesn1
Cep57l1
Cmtm4
Tmem123
Pole4
Pdp1
Dynlt1b
Anapc4
Kazn
Larp1b
Plag1
Chchd7
Homer3
Rad51ap2
Usp12
Sp1
Adpgk
Cdc42se2
Sema3f
G3bp2
Uso1
Ccdc9
Garem1
Esd
Pip4k2b
Sspn
Phf23
Dvl2
Mapk8
Tspan14
Acadm
Spsb1
Prpf40b
Prodh
Arfgap3
Atox1
Tmtc2
Slc8a2
Usp3
Xpr1
Snx8
Nxn
Rab22a
Ell
Gatad2a
Smurf1
Slc8b1
Degs1
Cbwd1
Vps26a
Pak1
Eef2kmt
Trappc2l
Galns
Pwwp3a
Asap3
Eif2ak4
Nemf
Id3
Tpst2
Orai1
Micall2
Itga2b
Spryd7
Slc12a4
Iffo2
Foxl1
Bcam
Dynlt1f
Dynlt1c
Bicdl1
Ccdc112
Csgalnact2
Xpc
Lsm3
Rell1
Pitx3
Gbf1
Vav2
Lss
Raly
Dusp11
Afg3l2
Pex10
5031439G07Rik
Nmt2
Nfe2l2
Apc2
Tnip2
Ldlrap1
Napepld
Ctnnbip1
Arhgef3
Saraf
Snx22
Add3
Jund
Iqcn
Zc3h12a
Mesd
Acads
Gxylt1
Clic4
Zbtb2
Hpcal1
Pdk1
Arrdc1
Fbxo43
Vgll4
Usp44
Qsox1
Hs6st1
Litaf
Aacs
Cpt2
Dera
Tent5c
Gpr155
Klf16
Rhpn2
Pim1
Ogfod3
Hexdc
Glrx3
Garnl3
Ripk2
Lamc1
Slc25a15
Sh2b3
Kctd6
Gpr157
Ppp2r5c
Ntmt1
Mios
Hebp1
Cmip
Spire2
Ctdsp2
Fam210b
Pofut2
Dop1b
Anxa11
Slc2a13
Sgtb
Nln
Zbtb37
Fah
Myo6
Lnpep
Tmem158
Chmp5
Bag1
Ing5
Dtymk
Fnbp1
Glt28d2
Tram2
Plcd3
Acbd4
Tmem64
Slc29a4
Gcnt1
Twsg1
Chaf1b
Crocc
Trim21
Dars
Dnpep
Gins2
Tmem125
Pkd1
Zhx1
Sp4
Yars
S100pbp
Pgbd5
Inpp5a
Kat6b
Nepro
Zfp28
Wipi1
Ankrd50
Fgfr3
Vkorc1l1
Otud1
Oasl1
Mtrf1l
Prex1
Slc38a10
Prpsap2
Atl2
Tbc1d2
Frmd6
Sertad2
Rbbp6
Helb
Tmem169
Pecr
Ctnnal1
Frat2
Tmem221
Rab39
Fbxl21
Brpf1
Gja3
Rab3d
Abcb9
Dipk2a
Urb1
Kirrel2
Plekho2
Pias1
Trp53bp2
Atp1b3
Ern1
Nrtn
Fez2
Slc22a5
Snx21
Tmub2
Paqr3
Avpi1
Slc29a3
Impa2
Gk5
Slc4a11
Dynlt1a
Prdx3
Sdc1
Crmp1
Trappc4
Rps25
Bcap31
Abcd1
Llgl2
Ascc2
Adap2
Sbno2
Plcd1
Cep70
Nup107
Rasip1
Izumo1
Opn3
Chml
Traf5
Scarb1
Tmem87b
Rbis
Papolg
Mindy2
Malt1
Vtn
Sarm1
Agpat2
Hspa2
Cdh12
Syn2
Usp28
Scn8a
Megf6
Rab43
Mast3
Rab11fip1
Plrg1
Osbp2
Anxa5
1810062G17Rik
Fancc
Ywhab
Ahsa2
Ing2
Cep55
Mex3d
Snx25
Sytl3
Bhlha15
Zfp746
Mapk9
Wdr20
H6pd
Dlg4
Tarsl2
Shcbp1l
Celf6
Dnajc16
Casp9
Mnd1
Grsf1
Cyb5r1
Shank3
Nadk
Kif27
Lims1
Slc22a21
Lonp1
Catsperd
Nt5dc3
Actr5
1110008P14Rik
Fam76a
Gpc5
Avl9
Sptbn4
Cmtm6
Blvrb
Fam219a
Dnaic1
Ipo5
Sdhc
Mpz
Notch1
Limk1
Ppp2r3a
Golga5
Setmar
Brd3os
Inpp4a
Vmn2r102
Bri3
Prkdc
Cyld
Csnk1g2
Dhdds
Mboat2
Ola1
Tppp
Pter
Manea
Dnm3
Baiap2l1
Rrbp1
Ssh3
Rassf3
Tmem267
Rmdn1
Rc3h1
Sh3bp4
Cpne3
Spata13
Pou3f1
Pnpla3
Gng12
Dhx35
Syt14
Tec
Xpnpep1
Mgst3
Ldlrad3
Ccdc85c
Edem1
Tmem41a
Btbd2
Sugct
Mplkip
Tom1
Akap7
Cactin
Zfand1
Gdpd5
Cox19
Plekhg5
Nod2
Ndrg2
Gpbp1
Pqlc3
Kremen1
Ube2g1
Habp4
Tmem220
Stx1a
Ep400
Vgf
Tmed6
Rrm2b
Plk3
Drap1
AI837181
Txnrd3
Clybl
Zfp78
Acer2
Mfsd14a
Mpc2
Dcaf6
Hk1
Gcgr
Acy1
Slco4a1
Ogfrl1
Eepd1
Adss
Erc1
Hps6
Armh3
Hmox2
Itprid2
Inpp5f
Sntg2
Ptprn2
Man1c1
Gpc3
Sergef
Ptms
Ltc4s
Tmem134
Aip
Foxn2
Zfp983
Clec11a
Ralgapa2
Shmt1
Shank1
Mphosph10
Mcee
Pdhb
Sqle
Ak7
Znfx1
Axin1
Pcyox1
Amz2
Rxylt1
Abhd18
Nup93
Spa17
Siae
Scyl2
Nectin2
Fstl3
Rabep2
Ppfia3
Lin7b
Rbm38
Adh5
Pard6g
Gdf6
Lrig1
Sec23a
Gemin2
Phf10
Col5a1
Zfp865
Zfp524
Fiz1
Tbl2
Nudt7
Optn
Rps29
Ubr3
Setx
Pgpep1
Ppargc1b
Pbx2
Gpsm3
Fxyd1
Nkx6-1
Fxyd7
Scaf1
Rras
Epb41l2
Zfp664
Ccdc92
Isyna1
Eps15l1
Cdc34
Mospd3
Sipa1
Camsap1
Pygo2
Ebag9
Fbxo31
Mbd2
Saysd1
Med16
Mcm9
Tmem132c
Eda
Vcl
Pxn
Slain2
Sox12
Micu1
Cers4
Gigyf2
Tmem50b
Klc3
Usp7
Strada
Atp7b
Alg11
Prkar1b
Dnaaf5
Nova2
Dcxr
Cbr2
Eea1
Rock1
Pop7
Capzb
Agps
Med26
Ankrd10
Trappc9
Clcn3
Brf1
Lonrf1
Heatr1
Zfp53
Fbxo5
Ulk1
Senp8
Myo9a
Lck
Trnau1ap
Ppfibp1
Zfp318
Gng8
Gng7
Ppfia4
Rnft1
Pbld2
Hnrnph3
Uba52
Rex1bd
Kif17
Iqce
Brat1
Smg1
Prr12
Pcgf3
Mzt1
Snap29
Pi4ka
Rpl31
Tmem192
Stim2
Uqcrq
Gdf9
Ap3m1
Adk
Rnf2
Nabp1
Txn1
Fosl2
Psd
Fbxl15
Sowahc
Septin10
Orai3
Myo10
Wrn
Purg
Tmem240
Plekhg6
Zdhhc2
Arhgef17
Rap1gap
Tgif2
Fhod3
Fbxo11
Mertk
Tmem59
Tceanc2
Hspg2
Muc3
Ikzf5
Acadsb
Gcc1
Arf5
Hddc2
Nbeal1
Atp23
Ninj1
Limk2
Tmem126b
Slc37a4
Tmem177
E2f1
Tufm
Ap3d1
Rhbdf2
Gls2
Scpep1
Acot7
Osbpl9
Nt5c3
9430038I01Rik
Lrpap1
Nphp3
Rnaset2b
Rnaset2a
Hic2
Fbrsl1
Wdr76
Mfap1a
Lsm11
Ncapg
Trim3
Smim20
Mtch2
Kdm2b
Tfam
Polr1d
Lnx2
Klhl26
Usp20
Dio3
BC005624
Birc6
Ppp1cb
Klf11
Pias3
Myo1c
Dusp3
Cfap97d1
Pawr
Usp45
Lingo3
Zfp516
Rffl
Ppp1r21
Kank3
Jph1
A930018P22Rik
Irx5
Tbc1d23
Carm1
Sh3bp2
Rassf8
Ppie
Ehd2
C1ql1
Ahcyl1
Ankrd24
Skap2
Polr2h
Clcn2
Castor1
Xkr8
Sart3
Iscu
Dnaja2
Prxl2c
Prrc1
Spcs3
Stom
Prkra
Pjvk
Lmf1
Foxi3
Myh9
Cap1
Adipor2
Tpi1
Mxi1
Abhd17a
Bcl9
Ttc38
Brwd1
Nampt
Stk3
Ptpn4
Caprin2
Psmc6
Coro1b
Trip10
Gpr108
Serinc5
Slc4a8
Il17d
Idua
Dgkq
Cgn
Por
Eml4
Atg14
Vsig10l
Pcid2
Cul4a
Bpnt2
Arhgap29
Crim1
Kifc2
Cyhr1
Smox
Pacs1
Slc25a40
Dbf4
Wnk2
Mapk13
Lzts3
Exosc9
Alg6
Bach1
Thbs3
Mtx1
Cdkn2d
Magi3
Polr1e
Trp53i13
Slc19a1
Kri1
Kcnq3
Arhgef19
Aco1
Abhd15
Map2k2
Cdkn2aip
Sumo3
Myadm
Irx2
Slc41a3
Hlf
Tex14
Dcaf5
Eloa
Gamt
Dazap1
Stk32c
Lrrc27
Usp33
Rad51c
Rspry1
Psme3ip1
Dsel
Elavl3
Neu3
Hcn2
Mob3a
Izumo4
Gtdc1
St3gal1
Lrrc63
Lcp1
1700025G04Rik
Mrpl2
Klc4
Cul7
Mlf2
Sipa1l2
Rnf31
Psme2
Arrb2
Slc25a1
Zfp868
Psmd12
Zfp628
Armc5
9130023H24Rik
Nfkbie
Abhd17c
Hspa12a
Gm36210
Zfr2
Prr5
Fzd9
Ell3
Atcay
Pdlim5
Bag3
Inpp5k
Pdcl
Inafm1
Ctbs
Rmi2
Tmem86a
Tob2
Fbxl3
Phc2
Pa2g4
Ost4
Cspp1
Cops5
Ndrg1
Cbl
Slc39a6
Elp2
Marchf9
Cdk4
Ginm1
Srd5a1
Nsun2
Vkorc1
Trim62
Igfbp5
Aprt
Espn
Marchf2
Srebf2
Sypl
Yif1b
Kif1c
Inca1
Mybl2
Tspan15
Dixdc1
Fbxo21
Ppp1ccb
Ppp1cc
Ppp2r1b
Atp8b3
Nhej1
Ncapg2
Ccdc62
Snx1
Ciao2a
Smim7
Fam120a
Btbd7
Atr
1700065D16Rik
Bcl3
Cbfa2t2
Xylt1
Raver2
Epb41l5
Ccnh
H2bc6
H1f4
Nckap5l
Trak2
Zbtb7b
LOC114841036
Fkbp2
Pgm2
Rapgef6
Asb1
Coa7
Cd164l2
Pygl
Lrrc42
Hspb11
Efr3b
Mafk
Micu2
Tent4b
Osbpl1a
Pou5f1
Dock6
P2ry2
Mknk1
Gm12500
Ampd2
Wwtr1
Sbk2
Pmm1
Wdr17
Arhgap17
Klf3
Polr2d
Relb
Tm2d2
Adam9
Lap3
Prkcd
Tmem69
Gpbp1l1
Acvr2b
Slc12a7
Tpt1
Atg10
Rbpms
Stard9
Scaf4
Map3k14
Specc1
Dennd4a
Stard5
Ppif
Rbfa
Tle6
Rab11fip5
Khnyn
Cbln3
Nbeal2
Ccdc12
Abcc4
Sh2d3c
Nub1
Zfp639
Tbc1d17
Akt1s1
Slc23a2
Pak4
1700030J22Rik
Usp43
Tspan9
Svip
Sf1
Anxa7
Srpk1
Pcbp3
Fam221a
Fzd10
Etnk2
Ccne1
Polk
Cert1
Aph1b
Cyth1
Lipt2
Epn2
Il12rb1
Cyp46a1
Cdh15
Fth1
Mlxip
Orc4
Mbd5
Iqgap1
Fkbp3
Fancm
Mtch1
Eif1ax
Tmcc1
Lars2
Gm10509
Fsip1
Arid4b
Mtmr10
Gpatch8
Psmg1
Rasa2
Gins1
Abhd12
Marchf3
Mphosph6
Cd59a
Aunip
Slc6a3
Anapc10
Abce1
Vps4a
Tmem260
Ralgds