ChIP-Atlas: Target genes

Potential target genes for Cdk9

Query protein: Cdk9
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX735292 | Unclassified
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Cdk9's Target genes

◢ Cdk9: Average

◢ SRX9144814: 3T3-L1

◢ SRX9144815: 3T3-L1

◢ SRX9144816: 3T3-L1

◢ SRX9144817: 3T3-L1

◢ SRX104410: ES cells

◢ SRX11717263: ES cells

◢ SRX11717264: ES cells

◢ SRX11717265: ES cells

◢ SRX11717266: ES cells

◢ SRX236483: ES cells

◢ SRX020971: Macrophages

◢ SRX020972: Macrophages

◢ SRX020973: Macrophages

◢ SRX020974: Macrophages

◢ SRX1550527: Macrophages

◢ SRX1550528: Macrophages

◢ SRX255482: MEF

◢ SRX277329: MEL

◢ SRX3200439: mESC derived haemogenic endothelium

◢ SRX3200440: mESC derived haemogenic endothelium

◢ SRX3200441: mESC derived haemogenic endothelium

◢ SRX620286: NIH/3T3

◢ SRX620287: NIH/3T3

◢ SRX620288: NIH/3T3

◢ SRX620289: NIH/3T3

◢ SRX735308: Th1 Cells

◢ SRX735309: Th1 Cells

◢ SRX735310: Th2 Cells

◢ SRX735282: Unclassified

◣ SRX735292: Unclassified

◢ Cdk9: STRING

Cldn34d
Il31ra
Chac1
Fyco1
Calcoco1
Kpna1
Phf12
Scrib
Prcc
Ccl3
Ccl4
Ddx23
Banp
Usp48
Phb
Sspn
Crtc2
Ifrd2
Tmem125
9430015G10Rik
Ifng
Abhd6
Pex14
Fastkd1
Rptor
Dync1i2
Mrpl19
Dusp2
Astl
Pprc1
Ap2m1
Nop14
Grk4
Usp5
Cdca3
Olfr806
S1pr4
Ncln
Ccl1
Snx17
Eif2b4
Cotl1
Cpsf1
Nedd8
Gmpr2
Kif2c
Tmem88
Naa38
Cyb5d1
Unk
Btrc
Sec61a1
Sharpin
Maf1
Gm35339
Wdr70
Mtg1
Sympk
Foxa3
Xcl1
Dhx33
Phlda1
Psat1
Lrrc59
Opa1
Cwc22
Rpp30
Fbxl18
Klhl17
Zfyve19
Dnajc17
Atp5o
Bub3
Hspa5
Rpia
Proser1
Nhlrc3
Zfp637
Mapkapk5
Dcps
Dnttip2
Sphk2
Rpl18
Fam83e
Dchs2
Zfp189
Mrpl50
Chchd6
Chmp4b
Odc1
Pomp
Clpb
Mmachc
Ccdc163
Usp31
Med6
Hsph1
Ap1g1
Mrpl44
Ormdl3
Scaf1
Rras
Capn15
Dffb
Cep104
Nr4a1
Mff
Rps19bp1
Gatb
Prr5l
Commd9
Kbtbd7
Pcbp1
Chmp6
Fam193a
Pafah2
Tmed2
Timm13
Csf2ra
Pigu
Ube3c
Timm22
Rps20
Med27
Arl14ep
Nfkbia
Trp53rkb
Ccp110
Aaas
Wnk1
Alg10b
Krr1
Phf13
Slc35b4
Lrif1
Ncbp2
0610012G03Rik
Il2
Cnot1
Btbd19
Tmem11
Kat7
Rbl2
Vcpip1
Gsk3a
Pemt
Tmem43
Chchd4
Lars
Naa60
Cep128
Herpud1
5730455P16Rik
N4bp2l2
Snw1
Tex14
Hspa8
Ints9
Hmbox1
Gtf3c6
Slc33a1
Nprl2
Cyb561d2
Htra2
Dqx1
Aup1
Rpl3
Tsnaxip1
Ranbp10
Ccdc77
B4galt7
Nabp1
Ifna13
Invs
Erp44
Max
Ap2s1
Tnf
Lta
Calm1
Lemd2
Dexi
Clec16a
Psmd7
Nmt1
Atg101
Rab5c
Wwox
Arid4b
Sepsecs
Crebl2
Cwc27
Ythdf2
Ipo13
Eef1a1
M6pr
Prmt6
Rel
Psmg3
Shmt2
Stk25
Aadacl2fm1
Mettl25
Ccdc59
Tbcd
R3hcc1l
Pabpc1
Ubxn1
Clptm1l
Tmem214
Wrap53
Trp53
Tmem101
Rcc1l
C87436
Rabac1
Bicd2
Dph2
B4galt2
Atp6v0b
Stc2
Sass6
Cmas
Palb2
Dctn5
Znfx1
Retsat
Elmod3
Tmed9
Edem2
Cltc
Tab1
Ctu1
Slc7a11
Rdh14
Cenps
Kat2a
Hspb9
Acp2
Prkcsh
Ccdc151
Slc27a4
Ndufs4
Spty2d1
Snrpd1
Cox7c
Dnajc16
Casp9
Tmem245
Cdk9
Nudt15
Tbck
Aimp1
Srp68
Crtam
Slc7a1
Chordc1
Prim1
Snrnp27
Fam227b
Dtwd1
Zcwpw2
Azi2
Trip4
Pfdn5
Trmt44
Tmem262
Zfpl1
Cdca5
Yars
S100pbp
Tnfsf8
Cluh
Phf23
Gabarap
Dvl2
Ccdc126
Gpr84
Smg8
Btg1
Pigq
Nhlrc4
Nup54
Cipc
Mrpl35
Csf2
Rnf123
Mst1
Psmc6
Ncbp3
Vps51
Thg1l
Ap5s1
Vps50
Hepacam2
Wdr36
Eapp
Eef1akmt4-ece2
Eef1akmt4
Alg3
Nme1
Enc1
Nelfa
Snrpc
Rps21
Drg2
Pcbp2
Ubqln4
Lamtor2
Cnih4
Rab25
Rangap1
Ptcd2
Mrps27
Ndc1
Ube2j2
Togaram1
Klhl28
Mphosph10
Mcee
Psmb5
Lrrc8a
Psmd3
Sar1b
Mrps25
Mfn2
Slc35g3
Polr2a
Slc39a13
Cstf1
Aurka
Nup153
Celf2
Bud13
Mrpl21
Ighmbp2
Eif2b5
Ptcd3
Polr1a
Brms1l
Ndufa9
Akap3
Mocs1
Cdk7
Fam53c
Nutf2
Klhl20
Zc3h11a
Zbed6
Nfkb1
Eif4a2
Sgms1
Tmem199
Poldip2
Iqch
Aagab
Rab33b
Zfp369
Zfp870
Rad18
Nup35
Ufl1
Dcp1a
Mrps33
Tmem94
Ippk
Vrk1
Hinfp
Gm3448
Gm3417
Tcte3
Ermard
Ddx47
Cct4
Fitm2
Ttc4
Dgat1
Kmt2d
Cnot2
Gtse1
Dmap1
Pole3
4933430I17Rik
Usp30
Atp5g2
Get4
Zfyve1
Faf1
Fam149b
Ecd
1700092M07Rik
Wdr74
Snx18
Tmem168
Map1lc3b
Tkfc
Ddb1
Tarbp2
Map3k12
Cops7a
Pex3
Adat2
Rplp0
Cops8
Ube2g2
Vmn2r4
Cct8
Tsfm
Btbd8
Klhdc4
Sec13
Mib2
Tysnd1
Ifrd1
Ndufs7
Pcnp
Rps3a1
Blmh
Jak2
Cog7
Slc3a2
Gapdh
Rpl27
Dcaf10
Znrd1as
Znrd1
Taf12
H2ax
Gspt1
Pum3
Zfp738
Syt3
Dus1l
Ppp2r5b
Rhot1
Tspoap1
4833439L19Rik
Mbd6
Ddit3
Dhrs9
Stau1
Rexo2
Wbp2
9130401M01Rik
Tfap4
Lrrc51
Arfgef1
Trub1
Pdcd7
Slx4ip
Mkks
Rpl9
Lias
Atf6
Rad54l2
Rps23
Dnajc11
Bod1
Rpl22
Zfp296
Gemin7
G3bp1
Cox7a2
Fra10ac1
Mrps15
Ttc13
Arv1
2610001J05Rik
Tmem107
Ints14
Gfus
Lat
Rpl8
Commd5
Sars
Mettl9
1110004F10Rik
Man1b1
Slc4a2
Cdk5
Ccpg1os
Ccpg1
Rfc4
Srp19
Rbm39
Psmb2
Kdm3b
Dhx30
Cdk5rap2
Rtn2
Tmed10
Actr10
Zfp513
Mtres1
Plaa
Ubxn11
Sdf2l1
Cd52
Nol10
Rbsn
Tcof1
Frg2f1
Foxj3
Cnot10
Gmfb
Tmem115
Kmt2a
Eif2b3
Lman2
Phospho1
Ndufs2
Adamts4
Ptrhd1
Cenpo
Sdad1
Mrpl58
Tpr
Odr4
Rpl36
Micos13
Eif4e2
Rabl6
Ppp6c
Mterf1a
Eps15
Cops6
Slmap
Nemf
Zar1l
Brca2
Aars2
Prpf4
Cdc26
Atf4
Actb
Tcea1
Gtf2h3
Eif2b1
Hus1
Nudcd1
Eny2
Nek4
Thoc1
Eefsec
Ece1
Arid1a
Mpzl3
Tut7
Cdkn2aipnl
Cox6c
Taco1
Gid4
Psmb6
Espl1
Fbxo48
Fam187a
Eftud2
Ccdc103
Vps72
Pip5k1a
Ubr4
Cacybp
Kifc5b
Ddx5
Cep95
Tspan4
Polr2l
Rpl30
Ate1
Dimt1
Sfxn5
Snx19
H3f3b
Eif5
Hacd2
Stx18
Mrpl30
Mitd1
Cant1
Mcl1
Hexim2
Mrpl39
Ddx1
Secisbp2
Cldnd1
Mlec
Jrk
Larp4
Rab1a
Rpl5
Nsfl1c
Lsm12
G6pc3
Rpl27a
Trak2
Eif3g
Slc38a1
Ndufs3
Kbtbd4
Rbm34
Heatr5a
Ptma
Ppip5k2
Gin1
2210016L21Rik
Mief1
Cdk5rap1
E130309D02Rik
Rps11
Rpl13a
Kctd5
Knl1
Rbm17
Lrwd1
Alkbh4
Tmem147
Cxcr6
Zc3h10
Rpl41
Atg16l1
Zdhhc21
Diaph1
Ndufc2
Ndufa10
Aurkaip1
Sdhaf3
Ctdp1
Trp53rka
Mrpl12
Esr1
Rgl2
Hjurp
A730008H23Rik
Pde6d
Cops7b
Rbm22
Sf3b2
Gal3st3
Tchp
Ube2v1
Slc39a9
Erh
Gtdc1
Zfp729a
Brf1
Ppp1r11
Thap4
Atg4b
Zfp566
Zfp260
Pgs1
Med17
Arf3
Ric8b
Brwd1
Psd
Fbxl15
Tatdn3
Nsl1
Heatr6
Zbtb7b
Smim8
Pan2
Rps6kb2
Gpaa1
Exosc4
Gars
Ints5
1810009A15Rik
Ppil4
Lbhd1
Them4
Ciao3
Dntt
Tsg101
Rnf220
Napg
Ctbp1
Tpgs1
Madcam1
Ubb
Zbtb37
Ints12
Gstcd
Guf1
Ccdc184
Actg1
Gtf2b
Tra2b
Ndfip1
Zfp672
Rplp2
Pidd1
Sh3bp5l
Ep400
Tefm
Zdhhc4
Nrde2
Adora2a
Fem1b
Tyw3
Cryz
Cep135
Pten
Nars
Epn1
Gtpbp2
Alkbh8
Rasa1
Mrpl34
Dda1
Zranb3
R3hdm1
Alkbh3
Abhd8
Ube2z
Leng8
Dis3l2
Ccdc174
Ndufb5
Mrpl47
Rnf166
Iars
Twf1
Yars2
Nup155
Pigg
Mtrex
Dhx29
Cnot8
Pcbd2
Lcorl
Smim13
Adrm1
Poglut3
Cul2
Tmem127
Ciao1
Cpped1
Polk
Cert1
Wasf1
Cdc40
Zfp661
Mrps5
Cdkl4
Ptpn6
Grcc10
Tmem248
Golga4
Rad1
Brix1
Ankrd46
Prrg2
Nosip
Nuf2
Wdr5
Wdr25
Wars
Wdr34
Taf9
Rad17
Ak6
Cd3d
Srsf2
Mfsd11
Myc
Ddx46
Ahcy
Fam168a
Gimap5
Marchf5
Cpeb3
Cd44
Rhbdd3
Ewsr1
Ncdn
AU040320
Tfeb
Git2
Ankrd13a
Ube4a
Zfp607b
Map3k10
Atp2b2
Snrpd3
Gucd1
Rps13
Txnl4b
Dhx38
Ccdc142
Bub1b
Sema6a
Epc1
Pbld2
Hnrnph3
Arfgap1
Zfp148
Psmf1
Ybey
Mcm3ap
Pa2g4
Lrrc45
Cenpx
Prkch
Tti2
Trmt5
Slc38a6
Desi2
Psmd4
Zfp606
Clcn4
Uspl1
Rabggtb
Lancl2
Trmt10a
Mttp
Plk3
Tbp
Psmb1
Smim11
Aftph
Txlnb
Vipas39
Ahsa1
Pcif1
Trmo
Siah2
Gtf2h4
Unc45b
Nle1
Lyrm2
Rpf1
Josd2
Aspdh
Tsen15
Calm3
Adck1
Edem3
Rdm1
Egr2
Slc25a32
Dcaf13
Serbp1
Psmd12
Gtf2h2
Pus3
Ddx25
Srsf1
Secisbp2l
Ap4e1
Rabggta
Qtrt2
Ccdc191
Appl2
Fam118a
Spink10
Fbxo38
Stpg3
Nelfb
Vmn2r102
Morf4l1
Ndufb2
Atxn1l
Ttc14
Cdiptos
Cdipt
Pomt1
Ift46
Dpf1
Fam83g
Ssbp1
Csde1
Alad
Gtf2a2
Ccz1
Kif13b
Etl4
Kdm8
Adat1
Dolk
Luc7l
Smarca4
Xpc
Lsm3
Mrps2
1700007K13Rik
Mzf1
Tpm1
Eif4a1
Gm3435
Bhlhe40
Zc3hc1
Mis18bp1
Mars1
Tars2
Tmem129
Tacc3
Itga2
Snx5
Mgme1
Hmgxb3
Commd2
Rpgrip1l
Fto
Blcap
Gabpb2
Trib1
Eif4ebp1
Zfc3h1
Thap2
Ndufab1
Txnl1
Ppih
Cnot4
C1qbp
Gas2
Snapc3
Mrps16
Dnajc9
Tmco3
Dcun1d2
Esyt2
Slc25a3
Eif3c
Hdlbp
Zfp706
Trpc4ap
Ttc17
Septin2
Tspan10
Nploc4
Prkacb
Mkrn2
Man2c1
Stx8
Cfap52
Sema7a
Kat8
Vti1b
Map2k5
Pdia6
Pou2af1
Nup214
Tpt1
Zfp1
Dpy19l4
Pik3r1
Snrpe
Mrpl1
Tubb5
Mdc1
Dnm1l
Rnf115
Polr3c
Srr
Smg6
Ints4
Rce1
Rapgef1
Cdc45
Wdr46
Pfdn6
St3gal2
Dhx16
Tvp23b
Exosc6
Gpam
Utp15
Ankra2
Cbr4
Exoc2
Coa8
Bag5
Cdca8
9930104L06Rik
9030025P20Rik
Arl8b
Nip7
Cog8
Thoc3
Exd2
Trmt12
Tti1
Rprd1b
Tex38
Atpaf1
Aasdh
Arfgap2
Rbm28
Fis1
8030462N17Rik
Trim23
Trappc13
Shld3
Prorp
L3mbtl2
Pold3
Malt1
Yipf2