ChIP-Atlas: Target genes

Potential target genes for Zic3

Query protein: Zic3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX12142051 | mESCs, differentiated
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Zic3's Target genes

◢ Zic3: Average

◢ SRX147572: ES cells

◢ SRX6879008: ES cells

◢ SRX7546911: ES cells

◢ SRX7546912: ES cells

◢ SRX7546913: ES cells

◢ SRX7546914: ES cells

◢ SRX823607: ES cells

◢ SRX12142046: mESCs, differentiated

◣ SRX12142051: mESCs, differentiated

◢ SRX12142055: mESCs, differentiated

◢ SRX15057955: mESCs, differentiated

◢ SRX15057958: mESCs, differentiated

◢ SRX15057960: mESCs, differentiated

◢ SRX9896071: mESCs, differentiated

◢ Zic3: STRING

Cldn34d
Alg14
Gatad2a
Gata4
Ufsp1
Fgf5
Slc7a7
Tox3
Ncor2
Hes7
Atrn
Sh2d5
Cd38
Sp5
Slc25a17
Eno1
Timp4
Hsd11b2
Tfpi
Wrap53
Trp53
Smc6
Gen1
Mpi
Pabpc1
Pbk
Znrf1
Epha1
Donson
Lhx1
Colec12
Gdap1l1
Zfp964
Letmd1
Ncs1
Spdef
Rffl
Slc25a4
Ifitm1
Ywhae
Tmem121
Med4
Gid4
Pitx3
Gbf1
Ints9
Hmbox1
Nudt9
Pigv
Zfp9
Acp5
Tbc1d5
Fam107a
Vrtn
Mapk3
Man2a2
Rnf220
Trabd
Mdm4
Igsf23
Foxa2
Rbm47
Mrc1
E030030I06Rik
Wbp4
Elf1
Zfp267
Ddx20
Kctd9
Cdca2
Schip1
Spry2
Frzb
Itm2b
Faim
Inha
Obsl1
Mycl
Cdhr1
Pacsin2
Cul5
Polr2h
Rps6ka3
Spata24
Fbxl7
B3gnt7
Atp1a2
Ubtf
Sema6a
Sbk1
Tenm4
Car14
Fbxo5
Chd1
Zfp629
Chrna9
Nkiras2
Dnajc7
Mrpl23
Glul
Grrp1
Emb
Mab21l1
Fzd8
Cep55
Prdm4
Gbx2
Msc
Setd5
Ror1
Asxl1
Klrb1b
Abi2
Rnf114
Apbb2
Rtkn
Tmem229a
Slc12a4
Lama1
Ypel2
Ppp1r16a
Foxh1
Kif13b
C4bp
Coq2
Zcrb1
Pphln1
Rbm24
Vezt
Fgd6
Apc
Slc6a16
Cd37
Tmc7
Arfgef1
Zfp410
Ptch2
Polg2
Neurog3
Grb2
H2-T-ps
Exoc6b
Dpp10
Zdhhc6
Vti1a
Cer1
Irgm2
Pef1
Notch2
Rtl8c
Sfxn2
Arl3
Enpp4
Wdr54
1700003E16Rik
Casz1
Tmco4
3300002I08Rik
Adgra2
Tanc1
Mbp
Zfp975
Itpkc
Coq8b
Hnrnpll
Tmed7
Eif1a
Atxn3
Mapre2
Ptprz1
Slc26a8
Mapk14
Chst15
Cep70
Klf5
Gm9639
Gm19668
Efcc1
Abl1
Dact2
Rps6ka5
Tbc1d9
Ccdc30
Ppp2r5b
Rnf125
Lhx8
Zfp936
Tas2r109
Omp
Mogat2
Zfp442
Zswim7
Ttc19
Arl2
Rassf4
Ednrb
Qpct
Kdm4a
Fam227b
Dtwd1
Macroh2a2
Olfr813
Ndufaf4
Pdcd2
Brms1l
Lama5
Wipi2
Ddah2
Klhl1
Dnaaf3
Golm2
Sprr2a3
Tprn
Phlpp2
Nudt1
Col13a1
Arap2
Phc2
Zfp937
Gm9736
Rtn4rl1
Dph1
Mesp1
Olfr461
Stc2
Gm3250
Rin3
Fgf6
Nat8f5
Tbc1d10b
Mylpf
Hmga1b
Hmga1
Hook2
Cachd1
Prelid3a
Tdrd3
Slco4c1
Tmem119
Adnp2
Pou2f1
Slc37a3
Rab19
Zbtb22
Tapbp
Svip
Foxp1
Lmo7
Tsc22d3
Mkx
Sh3rf1
Mterf1b
Rbpjl
Matn4
Ptpra
Pdlim2
Msh6
G2e3
P3h2
Ncbp3
Olfr1109
Gm4861
Mterf1a
Pdia3
Catsper2
Rasgrp3
Tsga10
Inf2
Tgfbr3
Lrrc8d
Ndrg1
Sclt1
D3Ertd751e
Mycn
Slc35g2
Zfp976
H1f2
Itgb3
Lsm14b
Fam110c
Mbd3
Rbms1
Tada1
Klf6
Fnta
Ephx2
Sptb
Cort
Rheb
Pde3a
Helt
Wsb2
Setd1b
Kdm2b
Chrac1
Tdgf1
Lrrc2
Pik3cd
Hcfc2
Ralb
Mpped2
Snrnp70
Cox5a
Nrp2
Marchf7
Coro2a
Ost4
Syne3
Pum3
Hnrnpr
Zkscan6
Prickle1
Gm10318
Grid2ip
Tmem121b
Zeb2
Trim36
Rtl8b
Gdpgp1
Cib1
Tmem63b
Mrpl14
Dmtn
Nostrin
Cfap300
Ugt1a9
Flrt2
4930474N05Rik
Per2
Ncoa1
Zbtb25
Zbtb1
Rmi1
Hnrnpk
Spink2
Ncdn
AU040320
Pgrmc2
Ssh1
Mios
Nmnat3
Duxbl3
Duxbl2
Duxbl1
Sprr2a2
Sprr2a1
Ppp6r1
Rad52
Pms1
Ormdl1
Wdr59
Shoc2
Bbip1
Tmem131l
Mnx1
Dbh
Prcc
Dnajc10
Serpina12
Flacc1
Tmem62
Gm9507
Gm2696
Tmem181a
Ppp2ca
Mthfd2l
Asap1
Pmaip1
Slc16a9
Agfg1
Cacng2
Abl2
Ccdc33
Ppp2r3a
Stk32a
Mov10
Hivep2
Slc9a3
Tmem59l
Crlf1
Gpsm2
Tagln3
Pcif1
Olfr368
Usp13
Tmub1
Fastk
Tgfbr1
Kcnn2
Gm10100
Bmp7
Bcl10
Cx3cl1
Trmt1
Nacc1
Flywch1
Psmb10
Ctrl
Pnrc1
Fn1
Rpp14
Htd2
Mapk8
Cgrrf1
Selenbp1
Pear1
Marcks
Crot
Zhx1
Actn1
Zfyve1
2300009A05Rik
R3hdm2
Prkag1
Fkbp14
Ndst1
Rbm45
Ppat
Paics
Zfp62
Epb41l2
Arid3c
Zkscan5
Zkscan14
Asap2
Irgm1
Fads1
Coil
Malt1
Pald1
Slc25a22
Rnf8
Olfr1028
Atp1b2
Rmnd5b
Usp37
Cnot9
D5Ertd579e
App
Naa16
Gfra3
Npm3
Fgf8
Prex1
Cnn3
Zfp36l2
Ptch1
Tcf7l1
Zfp868
Slc26a7
Ablim1
Wdr61
Dennd1a
Appl2
Olfr1229
5730409E04Rik
Grasp
Smyd4
Rpa1
Vrk1
Prmt9
Got2
Mtfp1
T2
Strn3
Ap4s1
Chid1
Atoh8
Smad7
Kif5c
Slc39a4
Kank2
Eomes
Dusp5
Snx17
Eif2b4
Rest
Slc27a6
C1ql1
Gp1ba
Tab1
Ppp1r15a
Plekha4
Slc13a2
Jakmip1
Tle4
Reep2
Kcnab3
Trappc1
Cntrob
Triobp
Nbea
Speg
Acta1
Cxxc5
Mreg
Ttc21b
Pelp1
Mpc1
Clcn4
Lypla1
Exd2
Aktip
Pdpn
Zfp64
Pcgf6
Garre1
Cd24a
Mesp2
Ppm1a
Rhof
Syde2
Pum1
Setdb2
Gm45935
Cab39l
Pdxdc1
Mpv17l
Grin2c
Serhl
Zfp978
Zfp991
Hnrnpa2b1
Cbx3
Crocc
Gm3233
Slc22a6
Npc1
Smad4
Nphp3
Cerkl
Pvr
Fstl1
Mcrs1
Eif4e
Snn
H3f3a
Pxdc1
Igfbpl1
Brinp1
Lsmem2
Casc3
Ap2m1
Zfp36
Trak1
Tmem184a
Tnc
Mapk4
Kcna2
Rab11fip1
Gna13
Mtap
Terf2
Nkx2-5
Fscn1
Liph
Slco5a1
C2cd2
Aplnr
Arhgap30
Ypel1
Axl
Gbp2
Lzts2
Cd63
Togaram1
Klhl28
Mafg
Srpr
Foxred1
Bcl7b
Dctn4
H2az2
Slc25a47
Hoxa2
Mmp15
Trim68
Poll
Dpcd
Slc10a7
Rbmxl1
Dcaf11
Mamstr
Pdp2
Slc66a2
Srrm4
Nebl
Plcb4
Gpr179
Adamts6
Znhit2
Mrpl49
Fau
Speer4f1
Igf2bp3
Tulp4
Tmem161a
Numa1
Slc22a23
Sulf1
Rrm2
Usp36
Sphkap
Fibcd1
Rcsd1
Rprd2
Gcnt4
Nat8
Kcnj4
Lgmn
Cand2
Glipr1l3
Caps2
Cdkn1b
Gfi1
P3h1
AU022252
Proser2
Tle2
Mllt1
Fgfr2
Scrt2
Tnni1
Krtap10-4
Tpm1
Cacng7
Rmdn1
Cpne3
Hs3st3a1
Gm8439
Adam17
Slc4a5
Socs5
Cyyr1
Setx
Zc3h12c
Abr
Sms
Lrrc38
Syne1
Cdkl2
B3gnt2
Phldb1
Trim62
Smap2
Hif3a
Gsx1
Spg20
Pde6d
Cops7b
Adam19
Ccn2
Abca8b
Neil1
Cebpe
Trerf1
Rgs12
Cep63
Anapc13
Csnk2a1
Rab37
Raph1
Zfp319
Usb1
Dner
Sp4
Pth1r
Loxl3
Dok1
Agtrap
Rhob
Slc38a8
Pcbp2
Sugt1
Exosc6
Gdnf
Usp10
Fut4
Cand1
Tspan12
Pik3r3
Set
Trim33
S1pr5
Ndfip2
Efna3
Srd5a3
B4galt7
Bsg
Serpini1
Pdcd10
Tle6
Eif4g2
Dll3
Espn
Marchf2
Mycbp2
Soga3
Tef
Mob4
Hes1
Epm2a
Trip12
Fbxo36
Sec22b
Adam22
Ackr3
Slc5a6
Atraid
Hoxb13
Tmeff1
Nfatc3
Nsrp1
Tead3
Klhdc8b
Ccdc71
Septin2
Hdlbp
Susd1
Erc1
Zfp787
Htr2a
Spred1
Suz12
Adprh
Ctf1
Bcl7c
Hoxb1
Gm3285
Ccnd1
Spint1
Slc12a2
Cela2a
Abhd18
Gm5622
Sec22c
Mad2l2
Draxin
Arhgap32
Mmp25
Hipk2
Gm17660
Dmrtb1
Nvl
Cnih4
Gimap3
Clasp1
Rtcb
Ptk7
Psd
Fbxl15
Sall4
Prmt8
Cxxc4
Tmem42
Prkar1a
Phf10
Pkm
Prss30
Efemp1
Tchh
Slc40a1
Csrp2
Mical1
Tecr
Tcf7l2
Zfp982
Cd47
Fam90a1b
Apoo
Plekhh1
Rrp1b
Hsf2bp
Ehmt2
Cltc
Zbtb12
Klf4
Spop
Serpina5
Prom1
Gtf3c4
Scrn3
Cir1
Plaat3
Asah2
Cpt1a
Slc25a44
Epha4
Ccdc66
Msh5
Clic1
Lefty1
Atp6v1c2
Stra6l
Ap1g2
Gm2237
Tctex1d1
Pdgfra
Smarca1
Slc4a2
Cdk5
Mob1a
Gm4925
Arl1
Shroom3
Pdzd2
Herc1
Prdm10
Cpb1
Slc14a1
Cspp1
Cops5
Clip4
Pyurf
Pdrg1
Slc46a3
Col5a1
Slain2
Utp15
Ankra2
Usp32
Afg1l
Gpr108
Trip10
Sun1
Nynrin
Gm14137
Parp6
Plk3
Tha1
Ate1
Svs1
Timm44
Smarce1
Krba1
Strap
Ube2d1
Hrg
Phf12
Samd4
Soat1
Ltc4s
Scd1
Atg5
Napepld
AI413582
Lamb1
Lef1
Kctd14
Srgn
Akt2
Tnf
H2bc6
H1f4
Lta
Cuedc1
C77080
Slc31a1
Fkbp15
Ubl3
Afap1l2
Hoxc13
Flnc
Dsp
Tbc1d4
Dab2ip
Ppp1r8
Cd160
Snx15
Ntng1
Wnt3
B4galt1
Clic4
Adnp
Tmem168
Slc35d1
Slc19a1
Fahd2a
Meaf6
Pcdh8
Fam178b
Cnbp
Ssbp2
Cdh1
Camkv
Percc1
Ssbp3
Zfp91
Lpxn
Tigd4
Hr
Smtn
Rab4a
Ezh1
Dusp10
1700056E22Rik
Plekha2
Stx11
Gne
Col4a2
Hdac1
H3c13
H2bc18
Ccdc9
Gna14
Fignl1
Ssbp4
Naaa
Snrpn
Nectin2
Lpar2
Ptdss2
Adgrb3
Crx
Mea1
Klhdc3
Csrp1
Stat2
Apof
Gm21119
Gm15319
H3c15
H3c14
H2ac19
H2ac18
Myo1e
Shc1
Cks1b
Bag3
Ndufb4
Ptdss1
Mterf3
Jpt1
Gapvd1
Mtfr1l
Vpreb1
Top3b
Six2
Usp35
Kctd21
Tlnrd1
Mesd
Jakmip3
Immp2l
Dpf3
Bcl3
Coa4
Rnf103
Msra
Orai3
Prrc2b
Pdpr
Dusp4
Pdlim3
Zmynd8
St18
Wscd2
Ctbp2
Slc6a9
Slc1a2
Ppp3cb
Sowahc
Septin10
Spata13
Ddit4
Cdkn2aip
Rabggtb
Inafm2
Yars2
Nt5c3
Msl1
Zyg11b
Spaca6
Vwa3a
Tcte2
Magi1
Fam136a
Dbx2
Meis3
Cntnap2
Lamb3
Kcnc1
AI661453
1700001C19Rik
Ptpn3
Ccpg1os
Ccpg1
Cfap20dc
Ush2a
Fcgr4
Zbtb7b
Ptpn14
Sdc1
Mgat1
Hapln4
Ghitm
Dlc1
Ipo8
Dynll2
Zfp687