ChIP-Atlas: Target genes

Potential target genes for Zic3

Query protein: Zic3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX9896071 | mESCs, differentiated
 
Color legends
  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
Zic3's Target genes

◢ Zic3: Average

◢ SRX147572: ES cells

◢ SRX6879008: ES cells

◢ SRX7546911: ES cells

◢ SRX7546912: ES cells

◢ SRX7546913: ES cells

◢ SRX7546914: ES cells

◢ SRX823607: ES cells

◢ SRX12142046: mESCs, differentiated

◢ SRX12142051: mESCs, differentiated

◢ SRX12142055: mESCs, differentiated

◢ SRX15057955: mESCs, differentiated

◢ SRX15057958: mESCs, differentiated

◢ SRX15057960: mESCs, differentiated

◣ SRX9896071: mESCs, differentiated

◢ Zic3: STRING

Speer4f1
Galnt11
Cgrrf1
Iqcf6
Fgf13
Slc9a3
Cep55
S100a16
Slc2a9
Plb1
Syt6
Cd38
Nudt9
F5
Selenbp1
Nploc4
Hkdc1
Aqp9
Rassf4
Dbh
Ccer2
Fam107a
Fam214a
Slc7a9
Zdhhc4
Zfp9
Gm8439
Ppp1r14a
Neurog3
Ccdc30
Syce2
Mmp25
Mov10
Pitx3
Gbf1
Cdh4
Dok7
Psmb10
Ctrl
Kif5c
Gm9736
Il21r
Tbc1d9
Dand5
Impdh1
Mrc1
Chrna9
Epha8
Cldn34d
Med4
Myl2
Adamts18
Ccsap
Rnf125
Mesp2
Arap2
Nudt1
Gm3776
Myog
Agfg1
Ass1
Stra6
Eva1a
Grip1
Hsd11b2
Sbk1
Fgf5
Sft2d2
Mast1
Herc6
Adm2
Tox3
Tmc7
Serpinf2
Ncbp3
Cd47
Slc25a4
Slc6a16
Cd37
Fut4
Uqcc1
Ywhag
Alg14
Espn
Rps6ka3
Coch
Col8a1
Gpr55
Ptgds
Tprn
Pik3cd
Apol9b
Gm3250
Arhgef4
Sema7a
Septin14
Spata5l1
Lgals1
Frzb
Npas2
Trmt1
Nacc1
Tenm4
Polr2h
Jdp2
Slc25a47
Vezt
Fgd6
Ankrd63
Rbm47
Omp
Lmo1
Cpsf4l
Tafa3
Ppm1j
Mpi
Epha1
Scimp
Klf6
Cx3cl1
Marchf7
Gm9508
Klhl29
Rbm24
Kcnk9
Upb1
Arid3c
Cnot2
Selenbp2
Stx11
Rtl8c
Susd2
Dnajc21
Kcnn2
Gm10100
Igsf23
Glod5
Hes7
Mtap
Zfp341
Cd109
Zfp114
Ryr2
Syde2
Rnf220
Stx16
Slc22a6
Dscam
Gm3233
Tnfaip8l3
Bmper
Kif26b
Slc7a7
Glul
Trabd
Tgfbr1
F830045P16Rik
Htr1b
Pappa
Prr5
Coro1b
Sprtn
Exoc8
Lsm14b
Helt
Irgm2
Tnfrsf8
Erfl
Fam149a
Abi2
Rab33b
Ocm
Trim62
Usp13
Duxbl3
Duxbl2
Duxbl1
Pdgfra
Clstn2
Gpr35
Foxp1
Mrpl23
Siglec1
Numa1
Ptprz1
Zkscan6
Ncor2
Asxl1
Enpp4
Mkx
Gm4861
Mex3a
Casd1
Flrt1
Capn5
Ccdc33
Atp6v1c2
Scrt2
Slc30a10
Ascl4
Macroh2a2
Tnf
Lta
Cdh13
Nt5c
Erfe
Ttc4
Flacc1
Gm5820
Pdxp
Shroom3
Klf9
Myorg
Brms1l
Fam110c
Irx1
Mall
Pdlim2
Por
Ppp6r1
Rmi1
Hnrnpk
Mas1
Mycn
Fut10
Gm3285
Znrf1
Bend7
Limch1
Rbms1
Pcgf5
6330409D20Rik
Prss12
Cga
Zbtb42
Timp4
Serpina12
Tmem98
Meox1
Sulf1
Arsg
Slc16a6
Pde3a
Rtf2
Gm10318
Kcnh1
Slc39a4
Mapk4
Slc9a9
2700081O15Rik
Oxt
Efnb3
Stk32a
Pet117
Kat14
Sema6a
Slc16a9
Lrp3
Il9r
Rffl
Vhl
Svs1
Ncs1
Lrrc8c
Percc1
Sdc1
Gngt2
Abi3
Gpr179
Tanc1
Dact2
Itgb3
Grik3
Serhl
Amn
Krt72
Stk32b
Smco4
Spg20
Nkx2-5
Mn1
Dkk3
Acacb
Hoxb1
Cdh1
Htr1d
Pla2g7
Col13a1
Sfrp1
Kcns1
Olfm1
Fzd8
Galnt1
Atp9a
Vegfb
Dnajc4
Smc6
Gen1
Neurog1
Rspo1
Npm3
Fgf8
Phactr3
Dip2b
Slc35e4
Ror2
Litaf
Ppp3ca
Npw
Fgf6
Cuedc1
Atp11a
Hs3st6
Gigyf1
Kdm4a
H2-T-ps
Asap2
Hgsnat
Syne3
Ccno
Teddm3
Ptk7
Gm3238
Lipe
Cabp7
Gbx2
Ubtf
Trim36
Col27a1
Wfdc21
Rasgrp2
Cd160
Robo3
Mob4
Ost4
Cd72
Ube2d1
Fam53b
Phf10
Tead1
Krtap10-4
Gadl1
Tox
Per3
Prss30
Spdef
Fscn1
Zfp629
AB124611
Lhx1
Krt24
Rtl8a
Hip1
Cpt1a
Lrrc8a
Ppp1r36
Shb
Bcl2
Notch2
Zcrb1
Pphln1
Sh2b2
Fam107b
Pxdn
Abcb10
Tyro3
Pax1
Fgf9
Chn1
Cngb1
Ubn2
Pigv
Adam33
Dab2ip
Rtl8b
Nfil3
Grid2ip
Galnt12
Arfgef1
Wnt11
Camk4
Clip2
Socs1
Kcnk2
Clcn2
Schip1
Acvr1c
Dusp5
Loxl4
Cmklr1
Speg
Slc35g2
Plin3
Sh3rf1
Osr2
Tmem256
Nlgn2
Amd2
Amd1
Inpp1
Set
Cd82
Pld6
Hnrnpu
Phldb1
Slc18a3
Chat
Hspbp1
Fmod
Magi1
Ptpn3
Sh2d5
Rap1gap2
Rsad2
Nova1
Best2
Nudt3
Tmem121
Spink2
Gzmm
Mdm4
Septin3
Drd5
Rmnd5b
Upp2
Acvr1
Scd2
Vstm5
Kcnc2
En2
Pdzd3
Asah2
Jhy
Bsg
Plekhh1
Dlk2
Atp5g2
Wbp4
Elf1
Lamb1
Slc9a5
Fhod1
Lmod3
Cdkn1b
Tepp
Rbpj
Scube3
Nfix
Lhpp
Rapgef3
Gyg
Dpp10
Ust
Rell1
Gbx1
Ints9
Hmbox1
Hs3st5
Casc3
Pip4k2a
Tsc2
Nthl1
Mpped2
Hr
Map2k6
Pdzd2
Lypd6b
Csf3r
Tsc22d3
Atp2b1
Tspear
Gm19402
Nckap5
Hmga1b
Hmga1
Slc28a3
Adgra2
Snx29
Gatad2a
Sox2
Kitl
Crybb2
Nebl
Zfp91
Lpxn
Ube2h
Vegfa
4933411K16Rik
Pkd2l1
Man2a2
Arhgef3
Med11
Tmem229a
Tle2
Srpx
Chrna7
Rtn4rl1
Dph1
Csrp1
Mapkapk2
Armc4
Mab21l2
Kctd14
Ntsr1
Zfp236
Galp
C4bp
Stk35
Ptch1
Fgf23
Rdh13
H1f2
Rtkn
Mgat1
Myh11
Podn
Cer1
Nos2
Fkbp14
Pafah1b2
Hsbp1l1
Nptxr
Hacd4
Gm45337
Anks1b
Fyn
Prr19
Tmem145
Ssbp3
Krtap10-10
Esam
Epm2a
S1pr5
Diras1
Snorc
Pmaip1
Emb
Ctif
Arhgap30
Ddx60
Cyp2w1
Scube1
Syne1
Tcte2
Ezh1
Trhr2
Lingo2
Fgr
Cdx1
Mcf2l
Gdap1l1
Hnrnpll
Cdc20b
Pcolce2
Mark4
Nfe2l2
Ccnh
Wnt2b
Mast4
Plcb2
Cdk19
Fam171a1
Robo1
Serpine3
Capg
Eid2b
Mrpl34
Abhd8
Gjc1
Ccdc6
Fam181b
Drd4
Aunip
Clba1
Ahnak2
Srrm4
Tnfsfm13
Tnfsf12
Ncoa1
Mogat2
Asic2
Fam43a
Otop1
Grrp1
Dmrtb1
Cachd1
Fgd5
Hcn1
Slc45a3
Akap17b
Dbx2
Mmp21
Zfp672
Dcc
Ttc22
Zfp36
Tle3
Plaat3
Hoxd3
Fam131a
Ror1
S1pr2
Tfpi
Prrc2b
Zfp267
Rabac1
St6galnac2
Fam71b
P3h2
Ccl24
Atp1a2
Sprr2a2
Sprr2a1
Ubqln1
Tmem131l
Vrtn
C1qtnf2
Pcdh8
Esrrg
Chrdl2
Mtnr1b
Hyi
Slc31a2
Gnpat
2810004N23Rik
R3hdm2
Mmp17
Gpam
Fnta
Rin2
Fmn1
Man1a
Gng8
Rgs12
Pcdhgb6
Pcdhga10
Agmat
Brwd1
Kiss1
Pik3r5
Gpr146
Foxa2
Nkiras2
Dnajc7
Kdm2b
Tada1
Cdhr1
Slc9a3r2
Psg27
Hivep1
Astn2
Tmem117
Vpreb3
Gm5134
Acaa1b
Mbp
Rab12
Dse
Gdf10
Tmem63b
Mrpl14
Fstl1
Pdp1
Fgfr2
Phlda3
Macrod1
P2ry2
Tor3a
Lsmem2
Adamts7
Rorb
Alcam
Camk2a
Kcna2
Ttc39c
Lefty1
Nt5c3
Ctr9
Lrrn1
Insyn2a
Krtap19-4
Krtap19-3
Pabpc1
Faim
1700020A23Rik
Tmem239
Mycl
Wsb2
Chrm4
Smtnl2
Arhgap32
Tal2
Rab11fip1
Tmem88
Naa38
Cyb5d1
Mef2b
Ank1
Tecr
Rad52
Cass4
Gse1
Tfap2c
Smarcd1
Ltbr
Enc1
Ntan1
Pde1c
Skil
Extl3
Lmo7
Trib1
Bpifb3
Gp1bb
Mcam
Mreg
Olfr461
Rsph4a
Grin2c
Pacsin1
Lama1
Tcf20
Slc34a3
Rnf224
Cysrt1
Rnf208
Cort
Wnt7a
Klrb1b
Dmkn
Fgf3
Susd4
Lingo1
Pgs1
Baiap2l2
Gna14
E030030I06Rik
Lyzl6
Krtap17-1
Zfp64
Ldlrad4
Cyp26b1
Ttc28
Spast
Trak1
Rorc
Hoxb9
Ehd1
Rnf114
Rps6ka5
Efcab6
Cdc7
Igfbp4
Cxxc4
Ndst1
Nhsl2
Ghr
Arap1
Myo5b
Mef2a
Enah
Fbxl19
Calcb
Smarce1
Atp13a2
Hey1
Pm20d2
Csrnp1
Sptbn4
Lypd1
Paip2b
Pmp22
Utp18
Mbtd1
Msl1
Fn1
Sorbs3
Aplnr
Prdm10
Ppara
Igf1r
Piwil1
Loxl3
Dok1
Enpp3
Kcng3
Tspan14
Nadk2
Zbtb14
Osbpl8
Hoxd1
Ano7
Fam81a
Hsdl1
Dnaaf1
Gpr182
Hand1
Prodh2
Mllt10
Got2
Npm1
Rprml
Thbs2
Klk7
Mup4
Itprid2
Slc35d3
Jph4
Cilp
Itga1
Pafah2
G2e3
Ssh1
Fgfrl1
Glipr1l2
Fbxl7
Nanos3
Bcl9
Sox3
Crot
Phactr1
Slfn2
Gm2102
Gab1
Avl9
Prkag2
Cnn2
Lyl1
Map1lc3a
Zfp964
Atrn
Tdgf1
Lrrc2
Fndc3c1
Sphkap
Slc25a10
Slc26a9
Dusp2
Astl
Zfyve1
Mgmt
Tfeb
Cd55
Uqcc2
Mesp1
Thra
Spred1
Rgma
Sp5
Dab1
Bcar3
Hes1
Plin5
Plin4
Rasa2
Slc5a8
Barx2
Naaa
Zbtb48
Zbtb7b
Ccdc126
A530016L24Rik
Ptpra
Dennd1a
Zcchc14
Prkar1b
Wdr86
Pgm1
Cep112
Raet1e
Raet1a
Paxx
Clic3
Slc25a23
Crb3
Tlr2
Sec61g
2410004P03Rik
Col23a1
2900026A02Rik
Sdk1
Nxn
Adam12
Rnf217
Spint1
Spry2
Chn2
Chsy1
Flrt2
Gabrg3
Apoa1
Apoc3
Mapre2
Slc24a3
Adcyap1
Msmp
Dlx6
Ufsp1
Th
Itga9
Zfp598
Odf2
Oprl1
Cep120
Popdc3
Fam102b
Saraf
Uhrf1bp1
Gsta1
Gfi1
Foxf1
Fam50b
Sh2b3
Gm45915
Slc25a44
Rnf144b
Trim7
Pcsk2
Ccdc60
Ifitm3
Septin8
Cd24a
Parp8
Sh3tc2
Lypla1
Olfr1028
Ypel2
Ssbp2
Dixdc1
Il10rb
Dlg5
Osgin1
C5ar1
Gdpd5
Dusp10
1700056E22Rik
Smyd4
Rpa1
Trp53bp1
Pard6g
Pth1r
Nid2
Clip4
Ccdc85c
Foxk1
Mbnl2
Tulp4
1700113H08Rik
Cdh20
Prss52
Prkar1a
Vsx1
Tbc1d5
Qrfpr
Myh9
Phlda1
Pias3
Smpdl3a
Nexn
St6galnac5
Sirt7
Rph3a
Rps6ka4
Ptgfrn
Glp1r
Dbn1
Cxxc5
Vsig10l
Zeb2
Eva1c
Wrap53
Trp53
Ackr3
Itpr2
Lrrn4
Mxi1
Abl1
Hmgxb4
Cxcl11
Sertad2
Rhbg
Ywhae
Slit2
Skor1
Gne
Esrp1
Pde11a
Akip1
Frem3
Ap2m1
Gdf6
Gm3646
Erc1
Tnni1
Ephb1
Frat1
Nwd2
Mef2d
6430548M08Rik
Grasp